Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS22030

Experiment: Glucose (C) and L-Glutamine (N); with TAPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glucose (C) and L-Glutamine (N); with TAPS
4,957,455	+		PFLU_RS22025	0.30	-0.6
4,957,455	+		PFLU_RS22025	0.30	+1.8
4,957,455	+		PFLU_RS22025	0.30	-0.8
4,957,456	-		PFLU_RS22025	0.30	+0.6
4,957,456	-		PFLU_RS22025	0.30	-0.4
4,957,581	+		PFLU_RS22025	0.39	-0.5
4,957,581	+		PFLU_RS22025	0.39	-2.6
4,957,581	+		PFLU_RS22025	0.39	-0.2
4,957,581	+		PFLU_RS22025	0.39	-1.0
4,957,581	+		PFLU_RS22025	0.39	+0.8
4,957,582	-		PFLU_RS22025	0.39	+0.4
4,957,582	-		PFLU_RS22025	0.39	-0.2
4,957,582	-		PFLU_RS22025	0.39	-1.7
4,957,582	-		PFLU_RS22025	0.39	-0.2
4,957,655	+		PFLU_RS22025	0.44	-2.3
4,957,655	+		PFLU_RS22025	0.44	-0.2
4,957,655	+		PFLU_RS22025	0.44	+0.0
4,957,655	+		PFLU_RS22025	0.44	-1.3
4,957,655	+		PFLU_RS22025	0.44	-1.2
4,957,655	+		PFLU_RS22025	0.44	-1.3
4,957,655	+		PFLU_RS22025	0.44	-1.6
4,957,656	-		PFLU_RS22025	0.45	-1.2
4,957,656	-		PFLU_RS22025	0.45	+0.5
4,957,656	-		PFLU_RS22025	0.45	-0.4
4,957,656	-		PFLU_RS22025	0.45	-2.3
4,957,656	-		PFLU_RS22025	0.45	-1.4
4,957,656	-		PFLU_RS22025	0.45	-0.4
4,957,656	-		PFLU_RS22025	0.45	-0.5
4,957,656	-		PFLU_RS22025	0.45	+0.2
4,957,656	-		PFLU_RS22025	0.45	-1.2
4,957,677	+		PFLU_RS22025	0.46	-1.4
4,957,677	+		PFLU_RS22025	0.46	-0.3
4,957,677	+		PFLU_RS22025	0.46	-1.0
4,957,678	-		PFLU_RS22025	0.46	-0.9
4,957,681	+		PFLU_RS22025	0.46	-0.8
4,957,681	+		PFLU_RS22025	0.46	-0.8
4,957,681	+		PFLU_RS22025	0.46	+2.8
4,957,681	+		PFLU_RS22025	0.46	-1.5
4,957,681	+		PFLU_RS22025	0.46	+0.3
4,957,682	-		PFLU_RS22025	0.46	-0.4
4,957,682	-		PFLU_RS22025	0.46	+0.5
4,957,682	-		PFLU_RS22025	0.46	+0.8
4,957,682	-		PFLU_RS22025	0.46	-0.6
4,957,682	-		PFLU_RS22025	0.46	-1.8
4,957,886	+		PFLU_RS22025	0.61	-1.1
4,957,887	-		PFLU_RS22025	0.61	+0.2
4,958,134	+		PFLU_RS22025	0.79	+0.8
4,958,135	-		PFLU_RS22025	0.79	-1.6
4,958,135	-		PFLU_RS22025	0.79	+0.4
4,958,135	-		PFLU_RS22025	0.79	-0.4
4,958,135	-		PFLU_RS22025	0.79	-1.8
4,958,247	+		PFLU_RS22025	0.87	+0.4
4,958,247	+		PFLU_RS22025	0.87	-0.4
4,958,247	+		PFLU_RS22025	0.87	-0.7
4,958,247	+		PFLU_RS22025	0.87	-1.7
4,958,247	+		PFLU_RS22025	0.87	-0.6
4,958,248	-		PFLU_RS22025	0.87	-0.8
4,958,248	-		PFLU_RS22025	0.87	-0.9
4,958,248	-		PFLU_RS22025	0.87	-0.2
4,958,248	-		PFLU_RS22025	0.87	+0.5
4,958,248	-		PFLU_RS22025	0.87	-1.0
4,958,248	-		PFLU_RS22025	0.87	-0.0
4,958,248	-		PFLU_RS22025	0.87	-1.9
4,958,248	-		PFLU_RS22025	0.87	-0.9
4,958,406	-				-0.2
4,958,461	-				+0.1
4,958,612	+		PFLU_RS22030	0.30	-2.3
4,958,612	+		PFLU_RS22030	0.30	-1.6
4,958,612	+		PFLU_RS22030	0.30	-0.5
4,958,929	+		PFLU_RS22030	0.81	-1.0
4,958,929	+		PFLU_RS22030	0.81	-2.2
4,958,930	-		PFLU_RS22030	0.82	+0.8
4,958,930	-		PFLU_RS22030	0.82	-0.8
4,958,930	-		PFLU_RS22030	0.82	-1.2
4,959,172	+				-0.1
4,959,219	+				+0.4
4,959,220	-				-0.2
4,959,220	-				+1.0
4,959,220	-				-0.9
4,959,251	+				+0.2
4,959,251	+				+0.5
4,959,252	-				-1.5
4,959,252	-				+1.1
4,959,252	-				-1.2
4,959,252	-				+0.3
4,959,252	-				-1.0
4,959,252	-				-0.5
4,959,252	-				-1.8
4,959,292	+				+0.3
4,959,292	+				+1.8
4,959,292	+				-0.8
4,959,292	+				-0.2
4,959,292	+				+0.0
4,959,292	+				-1.4
4,959,292	+				+0.5
4,959,292	+				-0.2
4,959,292	+				-0.8
4,959,292	+				-1.2
4,959,293	-				+0.2
4,959,293	-				-1.6
4,959,293	-				+0.1
4,959,293	-				-0.7
4,959,293	-				-0.0
4,959,293	-				-0.3
4,959,293	-				-0.8
4,959,293	-				+0.8
4,959,293	-				-0.5
4,959,293	-				+0.6
4,959,293	-				+0.1
4,959,293	-				+2.3
4,959,375	+				+0.6
4,959,401	+				-0.4
4,959,401	+				+2.3
4,959,401	+				-1.0
4,959,401	+				-2.5
4,959,401	+				+1.4
4,959,402	-				+0.9
4,959,402	-				+0.5
4,959,402	-				-1.2
4,959,402	-				-1.2
4,959,402	-				-1.7
4,959,402	-				+1.4
4,959,437	-				+0.7
4,959,437	-				-1.8
4,959,445	+				-0.7
4,959,446	-				+0.2
4,959,451	+				-1.1
4,959,452	-				+0.2
4,959,452	-				-0.2
4,959,457	+				+0.4
4,959,457	+				+1.0
4,959,457	+				+2.4
4,959,457	+				+0.8
4,959,457	+				-1.4
4,959,457	+				+1.8
4,959,457	+				+0.9
4,959,457	+				+0.3
4,959,457	+				+0.6
4,959,457	+				+1.2
4,959,457	+				+0.4
4,959,457	+				+0.6
4,959,457	+				-1.2
4,959,457	+				+1.3
4,959,457	+				+1.1
4,959,457	+				+1.6
4,959,457	+				-0.7
4,959,457	+				+0.9
4,959,457	+				+0.3
4,959,457	+				-2.1
4,959,458	-				+0.6
4,959,458	-				+1.4
4,959,458	-				+0.0
4,959,458	-				+0.8
4,959,458	-				+0.7
4,959,458	-				+0.0
4,959,458	-				+0.5
4,959,458	-				+0.2
4,959,458	-				+0.0
4,959,458	-				+0.2
4,959,458	-				+0.5
4,959,460	+				+0.6
4,959,460	+				+0.0
4,959,460	+				+0.8
4,959,460	+				-0.3
4,959,461	-				+1.2
4,959,461	-				-0.5
4,959,461	-				+2.3
4,959,478	+				-1.2
4,959,478	+				+0.3
4,959,478	+				-1.2
4,959,478	+				-2.4
4,959,478	+				-0.5
4,959,478	+				-0.5
4,959,478	+				+0.8
4,959,478	+				+0.5
4,959,478	+				-0.4
4,959,478	+				-0.4
4,959,478	+				-0.9
4,959,478	+				-0.3
4,959,478	+				-0.7
4,959,478	+				+0.1
4,959,478	+				-0.6
4,959,479	-				+1.3
4,959,479	-				+0.2
4,959,479	-				-0.9
4,959,479	-				-0.8
4,959,479	-				+0.2
4,959,479	-				-0.6
4,959,479	-				-0.5
4,959,479	-				+0.6
4,959,479	-				-0.5
4,959,479	-				-0.8
4,959,479	-				-0.2
4,959,479	-				+1.4
4,959,479	-				+0.8
4,959,479	-				-0.2
4,959,495	+				-0.3
4,959,496	-				-0.7
4,959,722	+		PFLU_RS22035	0.19	-0.7
4,959,722	+		PFLU_RS22035	0.19	+0.3
4,959,722	+		PFLU_RS22035	0.19	-0.2
4,959,722	+		PFLU_RS22035	0.19	-1.7
4,959,722	+		PFLU_RS22035	0.19	+0.3
4,959,722	+		PFLU_RS22035	0.19	+0.4
4,959,722	+		PFLU_RS22035	0.19	+0.9
4,959,722	+		PFLU_RS22035	0.19	+1.0
4,959,722	+		PFLU_RS22035	0.19	-0.4
4,959,722	+		PFLU_RS22035	0.19	-1.9
4,959,722	+		PFLU_RS22035	0.19	-1.1
4,959,722	+		PFLU_RS22035	0.19	+1.4
4,959,722	+		PFLU_RS22035	0.19	+0.1
4,959,722	+		PFLU_RS22035	0.19	+1.7
4,959,722	+		PFLU_RS22035	0.19	-0.8
4,959,722	+		PFLU_RS22035	0.19	-0.7
4,959,722	+		PFLU_RS22035	0.19	-0.1
4,959,722	+		PFLU_RS22035	0.19	+0.6
4,959,722	+		PFLU_RS22035	0.19	+0.2
4,959,722	+		PFLU_RS22035	0.19	-0.1
4,959,723	-		PFLU_RS22035	0.19	+2.3
4,959,723	-		PFLU_RS22035	0.19	-1.1
4,959,723	-		PFLU_RS22035	0.19	+0.5
4,959,723	-		PFLU_RS22035	0.19	+0.3
4,959,723	-		PFLU_RS22035	0.19	+0.0
4,959,723	-		PFLU_RS22035	0.19	-0.7
4,959,723	-		PFLU_RS22035	0.19	-0.9
4,959,723	-		PFLU_RS22035	0.19	+1.1
4,959,723	-		PFLU_RS22035	0.19	+0.5
4,959,723	-		PFLU_RS22035	0.19	+1.0
4,959,723	-		PFLU_RS22035	0.19	+0.8
4,959,723	-		PFLU_RS22035	0.19	-1.2
4,959,723	-		PFLU_RS22035	0.19	-1.2
4,959,723	-		PFLU_RS22035	0.19	-1.1
4,959,723	-		PFLU_RS22035	0.19	+3.1
4,959,723	-		PFLU_RS22035	0.19	+0.0
4,959,723	-		PFLU_RS22035	0.19	-1.2
4,959,723	-		PFLU_RS22035	0.19	-0.2
4,959,723	-		PFLU_RS22035	0.19	+0.8
4,959,723	-		PFLU_RS22035	0.19	+0.1
4,959,723	-		PFLU_RS22035	0.19	-0.1
4,959,726	+		PFLU_RS22035	0.19	-0.9
4,959,726	+		PFLU_RS22035	0.19	+1.1
4,959,726	+		PFLU_RS22035	0.19	+0.1
4,959,726	+		PFLU_RS22035	0.19	-0.9
4,959,726	+		PFLU_RS22035	0.19	+0.8
4,959,726	+		PFLU_RS22035	0.19	-1.8
4,959,726	+		PFLU_RS22035	0.19	-0.1
4,959,726	+		PFLU_RS22035	0.19	-1.3
4,959,726	+		PFLU_RS22035	0.19	-0.7
4,959,726	+		PFLU_RS22035	0.19	+1.2
4,959,726	+		PFLU_RS22035	0.19	-1.5
4,959,726	+		PFLU_RS22035	0.19	-0.4
4,959,726	+		PFLU_RS22035	0.19	-0.4
4,959,726	+		PFLU_RS22035	0.19	-1.1
4,959,726	+		PFLU_RS22035	0.19	+0.0
4,959,726	+		PFLU_RS22035	0.19	-0.2
4,959,726	+		PFLU_RS22035	0.19	-0.1
4,959,727	+		PFLU_RS22035	0.19	+0.5
4,959,727	-		PFLU_RS22035	0.19	-0.7
4,959,727	-		PFLU_RS22035	0.19	-0.2
4,959,727	-		PFLU_RS22035	0.19	-1.6
4,959,727	-		PFLU_RS22035	0.19	+1.2
4,959,727	-		PFLU_RS22035	0.19	-0.4
4,959,727	-		PFLU_RS22035	0.19	-1.6
4,959,727	-		PFLU_RS22035	0.19	+0.8
4,959,727	-		PFLU_RS22035	0.19	+0.4
4,959,727	-		PFLU_RS22035	0.19	-1.2
4,959,727	-		PFLU_RS22035	0.19	-0.9
4,959,727	-		PFLU_RS22035	0.19	-0.2
4,959,793	+		PFLU_RS22035	0.24	+0.2
4,959,794	-		PFLU_RS22035	0.24	-0.9
4,959,912	+		PFLU_RS22035	0.33	+0.4
4,959,912	+		PFLU_RS22035	0.33	+0.4
4,959,912	+		PFLU_RS22035	0.33	-0.7
4,959,912	+		PFLU_RS22035	0.33	-1.5
4,959,912	+		PFLU_RS22035	0.33	+0.4
4,959,913	-		PFLU_RS22035	0.33	+0.1
4,959,928	+		PFLU_RS22035	0.35	-1.5
4,959,928	+		PFLU_RS22035	0.35	-0.1
4,959,928	+		PFLU_RS22035	0.35	-0.6
4,959,929	-		PFLU_RS22035	0.35	-1.2
4,959,968	+		PFLU_RS22035	0.38	-0.0
4,959,968	+		PFLU_RS22035	0.38	-1.2
4,959,968	+		PFLU_RS22035	0.38	+0.8
4,959,968	+		PFLU_RS22035	0.38	-1.6
4,959,968	+		PFLU_RS22035	0.38	+0.0
4,959,968	+		PFLU_RS22035	0.38	+1.5
4,959,969	-		PFLU_RS22035	0.38	-0.8
4,959,969	-		PFLU_RS22035	0.38	+1.5
4,959,969	-		PFLU_RS22035	0.38	-0.6
4,959,969	-		PFLU_RS22035	0.38	+0.0
4,959,969	-		PFLU_RS22035	0.38	-0.8
4,959,969	-		PFLU_RS22035	0.38	-1.6
4,959,969	-		PFLU_RS22035	0.38	-0.7
4,960,005	-		PFLU_RS22035	0.40	+1.3
4,960,042	+		PFLU_RS22035	0.43	+1.0
4,960,042	+		PFLU_RS22035	0.43	+0.2
4,960,042	+		PFLU_RS22035	0.43	+0.2
4,960,042	+		PFLU_RS22035	0.43	+0.0
4,960,042	+		PFLU_RS22035	0.43	+1.3
4,960,042	+		PFLU_RS22035	0.43	-0.5
4,960,042	+		PFLU_RS22035	0.43	-0.2
4,960,042	+		PFLU_RS22035	0.43	-1.4
4,960,042	+		PFLU_RS22035	0.43	+1.1