Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS20245

Experiment: Glucose (C) and L-Glutamine (N); with TAPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glucose (C) and L-Glutamine (N); with TAPS
4,580,055	+				-1.1
4,580,055	+				+0.3
4,580,055	+				+1.3
4,580,055	+				-1.8
4,580,055	+				-1.6
4,580,055	+				+0.9
4,580,055	+				+0.5
4,580,055	+				-0.2
4,580,056	-				+1.0
4,580,056	-				-0.2
4,580,056	-				-0.6
4,580,056	-				+1.4
4,580,056	-				-2.1
4,580,056	-				+1.9
4,580,056	-				+0.3
4,580,056	-				-0.8
4,580,056	-				+0.5
4,580,056	-				-0.4
4,580,056	-				+1.7
4,580,058	+				-1.4
4,580,058	+				+1.7
4,580,059	-				-1.1
4,580,059	-				+0.7
4,580,080	+				+1.0
4,580,080	+				-0.3
4,580,081	-				-1.3
4,580,099	+				+1.9
4,580,099	+				-0.1
4,580,099	+				-1.5
4,580,100	-				-1.1
4,580,160	+				+0.5
4,580,160	+				-0.9
4,580,160	+				+3.7
4,580,160	+				-0.6
4,580,160	+				+0.7
4,580,161	-				-1.1
4,580,161	-				-1.3
4,580,161	-				-0.1
4,580,161	-				-1.5
4,580,228	-				+1.1
4,580,230	+				-0.3
4,580,230	+				-0.1
4,580,230	+				+0.9
4,580,230	+				-0.6
4,580,231	-				-2.0
4,580,231	-				+0.4
4,580,231	-				-0.6
4,580,240	+				+0.7
4,580,240	+				-0.1
4,580,300	+				-1.3
4,580,301	-				+1.1
4,580,301	-				+1.4
4,580,301	-				+1.6
4,580,303	+				+1.0
4,580,303	+				+0.6
4,580,304	-				-1.5
4,580,339	+				-1.9
4,580,356	+				-1.3
4,580,356	+				-1.6
4,580,356	+				-2.0
4,580,356	+				-0.8
4,580,357	-				-0.5
4,580,357	-				+1.1
4,580,357	-				+0.7
4,580,372	-				+0.9
4,580,372	-				+0.8
4,580,388	+				-0.5
4,580,389	-				-1.2
4,580,396	-				-0.9
4,580,405	-				-0.1
4,580,428	+				-1.3
4,580,429	-				-0.2
4,580,429	-				+2.7
4,580,468	+				+0.7
4,580,480	-				-0.1
4,580,480	-				-1.6
4,580,506	+				+0.2
4,580,520	+				+1.1
4,580,520	+				+0.1
4,580,520	+				+0.1
4,580,520	+				+1.5
4,580,520	+				-0.1
4,580,521	-				+0.7
4,580,597	+				-0.1
4,580,684	-				+2.0
4,580,714	+				+0.7
4,580,714	+				-1.5
4,580,714	+				-0.4
4,580,715	-				+0.3
4,580,797	+				+0.4
4,580,950	+		PFLU_RS31310	0.74	-2.5
4,580,950	+		PFLU_RS31310	0.74	+0.1
4,580,950	+		PFLU_RS31310	0.74	-0.1
4,580,951	-		PFLU_RS31310	0.74	-0.8
4,581,008	-				+0.9
4,581,020	+				-1.1
4,581,020	+				-0.1
4,581,020	+				+0.7
4,581,021	-				+0.7
4,581,021	-				+0.7
4,581,021	-				-0.2
4,581,039	+				-0.7
4,581,039	+				+1.4
4,581,039	+				+1.2
4,581,039	+				+0.1
4,581,039	+				+0.8
4,581,039	+				-1.4
4,581,039	+				+0.1
4,581,039	+				+0.2
4,581,039	+				+1.0
4,581,040	-				+0.3
4,581,040	-				+1.7
4,581,040	-				-0.3
4,581,040	-				+1.2
4,581,040	-				+0.4
4,581,040	-				-0.6
4,581,040	-				-0.3
4,581,040	-				-1.3
4,581,040	-				+0.3
4,581,040	-				+1.1
4,581,040	-				+0.9
4,581,040	-				-1.1
4,581,040	-				-0.2
4,581,113	+		PFLU_RS20245	0.17	+0.7
4,581,113	+		PFLU_RS20245	0.17	+0.8
4,581,114	-		PFLU_RS20245	0.17	+0.3
4,581,171	+		PFLU_RS20245	0.26	+0.4
4,581,171	+		PFLU_RS20245	0.26	+1.6
4,581,171	+		PFLU_RS20245	0.26	+1.3
4,581,172	-		PFLU_RS20245	0.27	-0.1
4,581,172	-		PFLU_RS20245	0.27	+0.4
4,581,172	-		PFLU_RS20245	0.27	+0.5
4,581,172	-		PFLU_RS20245	0.27	-1.1
4,581,172	-		PFLU_RS20245	0.27	-0.3
4,581,172	-		PFLU_RS20245	0.27	-0.8
4,581,172	-		PFLU_RS20245	0.27	+0.0
4,581,172	-		PFLU_RS20245	0.27	-1.2
4,581,172	-		PFLU_RS20245	0.27	+1.3
4,581,286	+		PFLU_RS20245	0.46	+0.0
4,581,287	-		PFLU_RS20245	0.46	-0.2
4,581,287	-		PFLU_RS20245	0.46	-0.4
4,581,293	+		PFLU_RS20245	0.47	+0.5
4,581,293	+		PFLU_RS20245	0.47	+0.1
4,581,293	+		PFLU_RS20245	0.47	+0.5
4,581,294	-		PFLU_RS20245	0.47	-0.1
4,581,294	-		PFLU_RS20245	0.47	+0.2
4,581,294	-		PFLU_RS20245	0.47	+0.7
4,581,294	-		PFLU_RS20245	0.47	+0.4
4,581,294	-		PFLU_RS20245	0.47	+0.9
4,581,294	-		PFLU_RS20245	0.47	+0.7
4,581,294	-		PFLU_RS20245	0.47	+1.1
4,581,461	-		PFLU_RS20245	0.75	-1.0
4,581,526	+		PFLU_RS20245	0.85	+0.5
4,581,527	-		PFLU_RS20245	0.86	-1.2
4,581,527	-		PFLU_RS20245	0.86	+0.3
4,581,600	+				+0.5
4,581,600	+				+0.1
4,581,600	+				-0.1
4,581,600	+				+1.8
4,581,601	-				-0.8
4,581,601	-				+1.1
4,581,601	-				+0.5
4,581,601	-				-0.5
4,581,629	+				-1.5
4,581,629	+				-0.3
4,581,629	+				+0.3
4,581,629	+				+1.2
4,581,629	+				-1.1
4,581,629	+				+0.3
4,581,630	-				+0.0
4,581,630	-				+0.6
4,581,630	-				-1.7
4,581,711	-		PFLU_RS20250	0.16	+0.0
4,581,711	-		PFLU_RS20250	0.16	+1.7
4,581,720	+		PFLU_RS20250	0.18	-0.7
4,581,720	+		PFLU_RS20250	0.18	+1.7
4,581,720	+		PFLU_RS20250	0.18	+1.7
4,581,721	-		PFLU_RS20250	0.18	+0.9
4,581,721	-		PFLU_RS20250	0.18	-0.9
4,581,721	-		PFLU_RS20250	0.18	-0.8
4,581,721	-		PFLU_RS20250	0.18	-0.8
4,581,721	-		PFLU_RS20250	0.18	-1.0
4,581,835	+		PFLU_RS20250	0.35	-1.6
4,581,836	-		PFLU_RS20250	0.35	-1.0
4,581,836	-		PFLU_RS20250	0.35	-0.4
4,581,836	-		PFLU_RS20250	0.35	-0.1
4,581,868	+		PFLU_RS20250	0.40	-1.3
4,581,868	+		PFLU_RS20250	0.40	+0.2
4,581,868	+		PFLU_RS20250	0.40	+0.9
4,581,868	+		PFLU_RS20250	0.40	-0.3
4,581,869	-		PFLU_RS20250	0.40	-0.5
4,581,869	-		PFLU_RS20250	0.40	+0.1
4,581,869	-		PFLU_RS20250	0.40	-0.3
4,581,869	-		PFLU_RS20250	0.40	+0.1
4,581,869	-		PFLU_RS20250	0.40	+0.7
4,581,869	-		PFLU_RS20250	0.40	+1.2
4,581,869	-		PFLU_RS20250	0.40	-0.3
4,581,869	-		PFLU_RS20250	0.40	+1.4
4,581,869	-		PFLU_RS20250	0.40	-1.8
4,581,869	-		PFLU_RS20250	0.40	+0.9
4,581,869	-		PFLU_RS20250	0.40	-1.8
4,581,869	-		PFLU_RS20250	0.40	+2.0
4,581,881	+		PFLU_RS20250	0.42	+0.3
4,581,882	-		PFLU_RS20250	0.42	-0.3
4,581,882	-		PFLU_RS20250	0.42	-2.0
4,581,902	+		PFLU_RS20250	0.45	-0.2
4,581,904	+		PFLU_RS20250	0.46	-1.2
4,581,904	+		PFLU_RS20250	0.46	+0.2
4,581,904	+		PFLU_RS20250	0.46	+0.5
4,581,904	+		PFLU_RS20250	0.46	-1.6
4,581,904	+		PFLU_RS20250	0.46	+0.7
4,581,904	+		PFLU_RS20250	0.46	+0.1
4,581,904	+		PFLU_RS20250	0.46	+2.3
4,581,904	+		PFLU_RS20250	0.46	-1.0
4,581,904	+		PFLU_RS20250	0.46	+0.8
4,581,904	+		PFLU_RS20250	0.46	+0.2
4,581,904	+		PFLU_RS20250	0.46	+0.3
4,581,904	+		PFLU_RS20250	0.46	-1.2
4,581,904	+		PFLU_RS20250	0.46	-0.3
4,581,905	-		PFLU_RS20250	0.46	+0.4
4,581,905	-		PFLU_RS20250	0.46	-0.1
4,581,905	-		PFLU_RS20250	0.46	+0.2
4,581,905	-		PFLU_RS20250	0.46	-0.5
4,581,905	-		PFLU_RS20250	0.46	+1.1
4,581,905	-		PFLU_RS20250	0.46	-0.0
4,581,905	-		PFLU_RS20250	0.46	-0.1
4,581,905	-		PFLU_RS20250	0.46	+0.6
4,581,905	-		PFLU_RS20250	0.46	+0.1
4,581,905	-		PFLU_RS20250	0.46	-1.5
4,581,905	-		PFLU_RS20250	0.46	+0.6
4,581,905	-		PFLU_RS20250	0.46	+0.4
4,581,972	+		PFLU_RS20250	0.56	-1.7
4,581,972	+		PFLU_RS20250	0.56	-1.6
4,581,972	+		PFLU_RS20250	0.56	-0.9
4,581,972	+		PFLU_RS20250	0.56	+0.4
4,581,997	+		PFLU_RS20250	0.60	+1.1
4,581,997	+		PFLU_RS20250	0.60	+1.3
4,581,997	+		PFLU_RS20250	0.60	+0.7
4,581,997	+		PFLU_RS20250	0.60	-0.4
4,581,997	+		PFLU_RS20250	0.60	+1.3
4,581,997	+		PFLU_RS20250	0.60	-0.6
4,581,998	-		PFLU_RS20250	0.60	-0.3
4,581,998	-		PFLU_RS20250	0.60	-0.5
4,581,998	-		PFLU_RS20250	0.60	-0.6
4,581,998	-		PFLU_RS20250	0.60	-0.2
4,581,998	-		PFLU_RS20250	0.60	-1.1
4,581,998	-		PFLU_RS20250	0.60	+3.3
4,581,998	-		PFLU_RS20250	0.60	+0.5
4,581,998	-		PFLU_RS20250	0.60	-0.4
4,581,998	-		PFLU_RS20250	0.60	-1.5
4,582,054	+		PFLU_RS20250	0.68	-1.6
4,582,054	+		PFLU_RS20250	0.68	-1.0
4,582,054	+		PFLU_RS20250	0.68	+1.5
4,582,054	+		PFLU_RS20250	0.68	+0.5
4,582,055	-		PFLU_RS20250	0.68	-0.1
4,582,175	+		PFLU_RS20250	0.87	+1.4
4,582,175	+		PFLU_RS20250	0.87	-0.8
4,582,175	+		PFLU_RS20250	0.87	-1.0
4,582,175	+		PFLU_RS20250	0.87	+0.5
4,582,175	+		PFLU_RS20250	0.87	-1.1
4,582,176	-		PFLU_RS20250	0.87	+1.7
4,582,176	-		PFLU_RS20250	0.87	+3.4
4,582,176	-		PFLU_RS20250	0.87	+0.0
4,582,176	-		PFLU_RS20250	0.87	+0.1
4,582,281	+				-1.6
4,582,281	+				+0.9
4,582,281	+				-0.2
4,582,281	+				+1.7
4,582,281	+				+1.1
4,582,282	-				+0.7
4,582,282	-				-0.3
4,582,282	-				+1.4
4,582,282	-				+0.1
4,582,342	+		PFLU_RS20255	0.31	-0.1
4,582,342	+		PFLU_RS20255	0.31	+0.7
4,582,343	-		PFLU_RS20255	0.31	-1.4
4,582,343	-		PFLU_RS20255	0.31	-0.2
4,582,343	-		PFLU_RS20255	0.31	-0.1
4,582,343	-		PFLU_RS20255	0.31	-0.9
4,582,415	+		PFLU_RS20255	0.65	+1.8
4,582,415	+		PFLU_RS20255	0.65	-0.1
4,582,415	+		PFLU_RS20255	0.65	-1.4
4,582,416	-		PFLU_RS20255	0.65	+1.9
4,582,416	-		PFLU_RS20255	0.65	-1.0
4,582,430	+		PFLU_RS20255	0.72	+0.4
4,582,430	+		PFLU_RS20255	0.72	-1.2
4,582,431	-		PFLU_RS20255	0.72	-1.6
4,582,491	+				+0.5
4,582,504	+				-0.6
4,582,505	-				+0.7
4,582,505	-				+1.1
4,582,505	-				-0.6
4,582,505	-				+0.6
4,582,505	-				-1.1
4,582,505	-				+0.7
4,582,505	-				+0.5
4,582,505	-				+0.8