Experiment: Glucose (C) and L-Glutamine (N); with TAPS
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS19765 and PFLU_RS19770 are separated by 1 nucleotides PFLU_RS19770 and PFLU_RS19775 overlap by 4 nucleotides PFLU_RS19775 and PFLU_RS19780 are separated by 13 nucleotides
PFLU_RS19765: PFLU_RS19765 - ABC transporter ATP-binding protein, at 4,472,114 to 4,473,955
_RS19765
PFLU_RS19770: PFLU_RS19770 - ABC transporter permease, at 4,473,957 to 4,474,832
_RS19770
PFLU_RS19775: PFLU_RS19775 - ABC transporter permease, at 4,474,829 to 4,475,785
_RS19775
PFLU_RS19780: PFLU_RS19780 - ABC transporter substrate-binding protein, at 4,475,799 to 4,477,436
_RS19780
Position (kb) 4474
4475
4476 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 4473.894 kb on - strand at 4473.980 kb on + strand at 4473.981 kb on - strand at 4473.995 kb on + strand at 4473.995 kb on + strand at 4473.995 kb on + strand at 4473.995 kb on + strand at 4473.995 kb on + strand at 4473.995 kb on + strand at 4473.995 kb on + strand at 4473.995 kb on + strand at 4473.995 kb on + strand at 4473.995 kb on + strand at 4473.995 kb on + strand at 4473.995 kb on + strand at 4473.995 kb on + strand at 4473.995 kb on + strand at 4473.995 kb on + strand at 4473.995 kb on + strand at 4473.995 kb on + strand at 4473.996 kb on - strand at 4473.996 kb on - strand at 4473.996 kb on - strand at 4473.996 kb on - strand at 4473.996 kb on - strand at 4473.996 kb on - strand at 4473.996 kb on - strand at 4473.996 kb on - strand at 4473.996 kb on - strand at 4473.996 kb on - strand at 4473.996 kb on - strand at 4473.996 kb on - strand at 4473.996 kb on - strand at 4473.996 kb on - strand at 4473.996 kb on - strand at 4473.996 kb on - strand at 4473.996 kb on - strand at 4473.996 kb on - strand at 4473.996 kb on - strand at 4473.997 kb on + strand at 4473.997 kb on + strand at 4473.997 kb on + strand at 4473.998 kb on - strand at 4473.998 kb on - strand at 4473.998 kb on - strand at 4473.998 kb on - strand at 4474.059 kb on - strand, within PFLU_RS19770 at 4474.207 kb on - strand, within PFLU_RS19770 at 4474.249 kb on + strand, within PFLU_RS19770 at 4474.249 kb on + strand, within PFLU_RS19770 at 4474.249 kb on + strand, within PFLU_RS19770 at 4474.249 kb on + strand, within PFLU_RS19770 at 4474.250 kb on - strand, within PFLU_RS19770 at 4474.250 kb on - strand, within PFLU_RS19770 at 4474.250 kb on - strand, within PFLU_RS19770 at 4474.250 kb on - strand, within PFLU_RS19770 at 4474.250 kb on - strand, within PFLU_RS19770 at 4474.250 kb on - strand, within PFLU_RS19770 at 4474.250 kb on - strand, within PFLU_RS19770 at 4474.250 kb on - strand, within PFLU_RS19770 at 4474.250 kb on - strand, within PFLU_RS19770 at 4474.288 kb on + strand, within PFLU_RS19770 at 4474.288 kb on + strand, within PFLU_RS19770 at 4474.288 kb on + strand, within PFLU_RS19770 at 4474.288 kb on + strand, within PFLU_RS19770 at 4474.289 kb on - strand, within PFLU_RS19770 at 4474.348 kb on + strand, within PFLU_RS19770 at 4474.348 kb on + strand, within PFLU_RS19770 at 4474.348 kb on + strand, within PFLU_RS19770 at 4474.348 kb on + strand, within PFLU_RS19770 at 4474.348 kb on + strand, within PFLU_RS19770 at 4474.348 kb on + strand, within PFLU_RS19770 at 4474.348 kb on + strand, within PFLU_RS19770 at 4474.348 kb on + strand, within PFLU_RS19770 at 4474.348 kb on + strand, within PFLU_RS19770 at 4474.348 kb on + strand, within PFLU_RS19770 at 4474.348 kb on + strand, within PFLU_RS19770 at 4474.348 kb on + strand, within PFLU_RS19770 at 4474.348 kb on + strand, within PFLU_RS19770 at 4474.349 kb on - strand, within PFLU_RS19770 at 4474.349 kb on - strand, within PFLU_RS19770 at 4474.610 kb on - strand, within PFLU_RS19770 at 4474.610 kb on - strand, within PFLU_RS19770 at 4474.610 kb on - strand, within PFLU_RS19770 at 4474.896 kb on + strand at 4474.896 kb on + strand at 4474.896 kb on + strand at 4474.896 kb on + strand at 4474.986 kb on + strand, within PFLU_RS19775 at 4474.987 kb on - strand, within PFLU_RS19775 at 4475.028 kb on + strand, within PFLU_RS19775 at 4475.028 kb on + strand, within PFLU_RS19775 at 4475.029 kb on - strand, within PFLU_RS19775 at 4475.139 kb on + strand, within PFLU_RS19775 at 4475.139 kb on + strand, within PFLU_RS19775 at 4475.139 kb on + strand, within PFLU_RS19775 at 4475.139 kb on + strand, within PFLU_RS19775 at 4475.140 kb on - strand, within PFLU_RS19775 at 4475.140 kb on - strand, within PFLU_RS19775 at 4475.140 kb on - strand, within PFLU_RS19775 at 4475.232 kb on + strand, within PFLU_RS19775 at 4475.232 kb on + strand, within PFLU_RS19775 at 4475.232 kb on + strand, within PFLU_RS19775 at 4475.232 kb on + strand, within PFLU_RS19775 at 4475.233 kb on - strand, within PFLU_RS19775 at 4475.233 kb on - strand, within PFLU_RS19775 at 4475.233 kb on - strand, within PFLU_RS19775 at 4475.233 kb on - strand, within PFLU_RS19775 at 4475.233 kb on - strand, within PFLU_RS19775 at 4475.274 kb on + strand, within PFLU_RS19775 at 4475.393 kb on - strand, within PFLU_RS19775 at 4475.429 kb on + strand, within PFLU_RS19775 at 4475.430 kb on - strand, within PFLU_RS19775 at 4475.773 kb on + strand at 4475.773 kb on + strand at 4475.773 kb on + strand at 4475.773 kb on + strand at 4475.773 kb on + strand at 4475.773 kb on + strand at 4475.773 kb on + strand at 4475.773 kb on + strand at 4475.773 kb on + strand at 4475.773 kb on + strand at 4475.773 kb on + strand at 4475.773 kb on + strand at 4475.773 kb on + strand at 4475.773 kb on + strand at 4475.773 kb on + strand at 4475.773 kb on + strand at 4475.773 kb on + strand at 4475.774 kb on - strand at 4475.774 kb on - strand at 4475.774 kb on - strand at 4475.774 kb on - strand at 4475.774 kb on - strand at 4475.774 kb on - strand at 4475.774 kb on - strand at 4475.774 kb on - strand at 4475.774 kb on - strand at 4475.774 kb on - strand at 4475.774 kb on - strand at 4475.774 kb on - strand at 4475.774 kb on - strand at 4475.774 kb on - strand at 4475.774 kb on - strand at 4475.774 kb on - strand at 4475.774 kb on - strand at 4475.774 kb on - strand at 4475.774 kb on - strand at 4475.774 kb on - strand at 4475.774 kb on - strand at 4475.774 kb on - strand at 4475.779 kb on + strand at 4475.779 kb on + strand at 4475.779 kb on + strand at 4475.780 kb on - strand at 4475.780 kb on - strand at 4475.780 kb on - strand at 4475.780 kb on - strand at 4475.833 kb on + strand at 4475.833 kb on + strand at 4475.833 kb on + strand at 4475.833 kb on + strand at 4475.833 kb on + strand at 4475.834 kb on - strand at 4475.834 kb on - strand at 4475.834 kb on - strand at 4475.834 kb on - strand at 4475.834 kb on - strand at 4475.834 kb on - strand at 4475.834 kb on - strand at 4475.834 kb on - strand at 4475.834 kb on - strand at 4475.867 kb on - strand at 4475.886 kb on + strand at 4475.886 kb on + strand at 4475.886 kb on + strand at 4475.886 kb on + strand at 4475.886 kb on + strand at 4475.887 kb on - strand at 4475.962 kb on + strand at 4475.962 kb on + strand at 4475.962 kb on + strand at 4475.962 kb on + strand at 4475.962 kb on + strand at 4475.963 kb on - strand, within PFLU_RS19780 at 4475.963 kb on - strand, within PFLU_RS19780 at 4475.963 kb on - strand, within PFLU_RS19780 at 4475.963 kb on - strand, within PFLU_RS19780 at 4475.963 kb on - strand, within PFLU_RS19780 at 4475.963 kb on - strand, within PFLU_RS19780 at 4475.963 kb on - strand, within PFLU_RS19780 at 4476.158 kb on - strand, within PFLU_RS19780 at 4476.331 kb on + strand, within PFLU_RS19780 at 4476.331 kb on + strand, within PFLU_RS19780 at 4476.332 kb on - strand, within PFLU_RS19780 at 4476.361 kb on + strand, within PFLU_RS19780 at 4476.520 kb on + strand, within PFLU_RS19780 at 4476.520 kb on + strand, within PFLU_RS19780 at 4476.520 kb on + strand, within PFLU_RS19780 at 4476.520 kb on + strand, within PFLU_RS19780 at 4476.520 kb on + strand, within PFLU_RS19780 at 4476.520 kb on + strand, within PFLU_RS19780 at 4476.520 kb on + strand, within PFLU_RS19780 at 4476.520 kb on + strand, within PFLU_RS19780 at 4476.520 kb on + strand, within PFLU_RS19780 at 4476.521 kb on - strand, within PFLU_RS19780 at 4476.521 kb on - strand, within PFLU_RS19780 at 4476.521 kb on - strand, within PFLU_RS19780 at 4476.521 kb on - strand, within PFLU_RS19780 at 4476.521 kb on - strand, within PFLU_RS19780 at 4476.521 kb on - strand, within PFLU_RS19780 at 4476.576 kb on - strand, within PFLU_RS19780 at 4476.682 kb on + strand, within PFLU_RS19780 at 4476.704 kb on - strand, within PFLU_RS19780
Per-strain Table
Position Strand Gene LocusTag Fraction Glucose (C) and L-Glutamine (N); with TAPS remove 4,473,894 - +1.2 4,473,980 + +1.0 4,473,981 - -2.0 4,473,995 + -1.3 4,473,995 + +0.8 4,473,995 + +1.8 4,473,995 + -0.4 4,473,995 + -1.0 4,473,995 + +0.8 4,473,995 + +0.6 4,473,995 + +0.1 4,473,995 + +2.6 4,473,995 + +0.3 4,473,995 + -1.0 4,473,995 + -1.0 4,473,995 + +0.1 4,473,995 + -1.6 4,473,995 + +1.8 4,473,995 + -1.0 4,473,995 + +2.0 4,473,996 - -0.4 4,473,996 - +0.1 4,473,996 - +0.1 4,473,996 - -0.0 4,473,996 - -1.5 4,473,996 - +2.0 4,473,996 - -0.8 4,473,996 - +0.2 4,473,996 - -1.2 4,473,996 - -0.1 4,473,996 - +0.1 4,473,996 - -2.2 4,473,996 - -1.8 4,473,996 - -0.2 4,473,996 - +0.5 4,473,996 - +1.0 4,473,996 - +0.3 4,473,996 - -0.8 4,473,996 - +0.5 4,473,997 + +0.3 4,473,997 + -1.0 4,473,997 + -0.8 4,473,998 - +1.0 4,473,998 - -1.8 4,473,998 - -0.1 4,473,998 - -0.5 4,474,059 - PFLU_RS19770 0.12 -1.0 4,474,207 - PFLU_RS19770 0.29 -0.6 4,474,249 + PFLU_RS19770 0.33 -0.9 4,474,249 + PFLU_RS19770 0.33 -2.0 4,474,249 + PFLU_RS19770 0.33 +0.6 4,474,249 + PFLU_RS19770 0.33 -1.8 4,474,250 - PFLU_RS19770 0.33 +0.4 4,474,250 - PFLU_RS19770 0.33 -0.4 4,474,250 - PFLU_RS19770 0.33 +0.4 4,474,250 - PFLU_RS19770 0.33 -2.0 4,474,250 - PFLU_RS19770 0.33 -0.0 4,474,250 - PFLU_RS19770 0.33 +0.6 4,474,250 - PFLU_RS19770 0.33 -1.1 4,474,250 - PFLU_RS19770 0.33 +0.2 4,474,250 - PFLU_RS19770 0.33 -2.2 4,474,288 + PFLU_RS19770 0.38 -0.3 4,474,288 + PFLU_RS19770 0.38 +1.0 4,474,288 + PFLU_RS19770 0.38 -1.4 4,474,288 + PFLU_RS19770 0.38 -0.4 4,474,289 - PFLU_RS19770 0.38 +1.8 4,474,348 + PFLU_RS19770 0.45 -0.8 4,474,348 + PFLU_RS19770 0.45 +1.6 4,474,348 + PFLU_RS19770 0.45 -1.7 4,474,348 + PFLU_RS19770 0.45 +1.8 4,474,348 + PFLU_RS19770 0.45 +0.5 4,474,348 + PFLU_RS19770 0.45 +0.2 4,474,348 + PFLU_RS19770 0.45 +0.4 4,474,348 + PFLU_RS19770 0.45 +0.4 4,474,348 + PFLU_RS19770 0.45 +0.2 4,474,348 + PFLU_RS19770 0.45 +0.4 4,474,348 + PFLU_RS19770 0.45 +1.0 4,474,348 + PFLU_RS19770 0.45 +1.2 4,474,348 + PFLU_RS19770 0.45 -0.5 4,474,349 - PFLU_RS19770 0.45 +0.6 4,474,349 - PFLU_RS19770 0.45 -0.3 4,474,610 - PFLU_RS19770 0.75 -0.7 4,474,610 - PFLU_RS19770 0.75 -0.7 4,474,610 - PFLU_RS19770 0.75 -0.4 4,474,896 + -0.4 4,474,896 + -0.1 4,474,896 + -1.4 4,474,896 + +0.9 4,474,986 + PFLU_RS19775 0.16 -1.0 4,474,987 - PFLU_RS19775 0.17 -0.4 4,475,028 + PFLU_RS19775 0.21 -0.7 4,475,028 + PFLU_RS19775 0.21 -0.5 4,475,029 - PFLU_RS19775 0.21 +1.0 4,475,139 + PFLU_RS19775 0.32 +1.9 4,475,139 + PFLU_RS19775 0.32 -0.3 4,475,139 + PFLU_RS19775 0.32 -2.0 4,475,139 + PFLU_RS19775 0.32 -1.0 4,475,140 - PFLU_RS19775 0.32 -0.5 4,475,140 - PFLU_RS19775 0.32 -0.3 4,475,140 - PFLU_RS19775 0.32 -2.9 4,475,232 + PFLU_RS19775 0.42 -2.2 4,475,232 + PFLU_RS19775 0.42 -0.8 4,475,232 + PFLU_RS19775 0.42 -0.4 4,475,232 + PFLU_RS19775 0.42 -0.2 4,475,233 - PFLU_RS19775 0.42 -1.0 4,475,233 - PFLU_RS19775 0.42 -1.3 4,475,233 - PFLU_RS19775 0.42 +0.6 4,475,233 - PFLU_RS19775 0.42 +0.2 4,475,233 - PFLU_RS19775 0.42 -0.1 4,475,274 + PFLU_RS19775 0.46 -1.8 4,475,393 - PFLU_RS19775 0.59 +0.0 4,475,429 + PFLU_RS19775 0.63 -0.5 4,475,430 - PFLU_RS19775 0.63 -1.5 4,475,773 + +1.4 4,475,773 + +0.3 4,475,773 + -0.2 4,475,773 + +0.7 4,475,773 + +0.3 4,475,773 + +0.4 4,475,773 + -0.1 4,475,773 + +1.1 4,475,773 + +0.4 4,475,773 + -0.4 4,475,773 + +0.3 4,475,773 + -2.1 4,475,773 + -0.8 4,475,773 + +0.8 4,475,773 + +0.3 4,475,773 + +0.8 4,475,773 + -1.2 4,475,774 - +2.2 4,475,774 - -0.1 4,475,774 - -0.3 4,475,774 - +0.0 4,475,774 - -0.5 4,475,774 - -1.2 4,475,774 - -0.7 4,475,774 - -0.1 4,475,774 - +0.7 4,475,774 - -2.0 4,475,774 - +0.5 4,475,774 - -0.1 4,475,774 - -1.3 4,475,774 - +0.1 4,475,774 - -1.5 4,475,774 - -0.6 4,475,774 - -0.1 4,475,774 - +0.2 4,475,774 - -2.0 4,475,774 - -0.2 4,475,774 - -0.4 4,475,774 - -1.1 4,475,779 + -0.9 4,475,779 + +0.2 4,475,779 + -0.1 4,475,780 - +0.3 4,475,780 - +0.5 4,475,780 - +0.9 4,475,780 - -0.2 4,475,833 + +0.7 4,475,833 + -0.0 4,475,833 + +0.6 4,475,833 + +0.9 4,475,833 + +1.2 4,475,834 - -1.7 4,475,834 - +0.0 4,475,834 - -0.1 4,475,834 - -1.0 4,475,834 - +0.4 4,475,834 - -0.3 4,475,834 - +0.3 4,475,834 - -0.6 4,475,834 - +1.2 4,475,867 - -1.4 4,475,886 + +0.7 4,475,886 + +0.0 4,475,886 + +1.4 4,475,886 + -1.5 4,475,886 + +0.7 4,475,887 - -0.2 4,475,962 + -0.1 4,475,962 + +0.9 4,475,962 + -0.2 4,475,962 + -0.8 4,475,962 + -2.2 4,475,963 - PFLU_RS19780 0.10 +0.3 4,475,963 - PFLU_RS19780 0.10 -0.5 4,475,963 - PFLU_RS19780 0.10 +1.4 4,475,963 - PFLU_RS19780 0.10 +0.4 4,475,963 - PFLU_RS19780 0.10 +0.0 4,475,963 - PFLU_RS19780 0.10 +0.9 4,475,963 - PFLU_RS19780 0.10 +1.0 4,476,158 - PFLU_RS19780 0.22 +0.2 4,476,331 + PFLU_RS19780 0.32 +1.3 4,476,331 + PFLU_RS19780 0.32 +2.2 4,476,332 - PFLU_RS19780 0.33 +1.2 4,476,361 + PFLU_RS19780 0.34 +1.2 4,476,520 + PFLU_RS19780 0.44 -1.0 4,476,520 + PFLU_RS19780 0.44 +1.2 4,476,520 + PFLU_RS19780 0.44 +0.9 4,476,520 + PFLU_RS19780 0.44 +2.4 4,476,520 + PFLU_RS19780 0.44 -0.2 4,476,520 + PFLU_RS19780 0.44 +2.6 4,476,520 + PFLU_RS19780 0.44 -0.5 4,476,520 + PFLU_RS19780 0.44 -1.7 4,476,520 + PFLU_RS19780 0.44 +2.0 4,476,521 - PFLU_RS19780 0.44 -0.5 4,476,521 - PFLU_RS19780 0.44 +0.0 4,476,521 - PFLU_RS19780 0.44 +1.9 4,476,521 - PFLU_RS19780 0.44 +1.2 4,476,521 - PFLU_RS19780 0.44 +2.2 4,476,521 - PFLU_RS19780 0.44 -1.3 4,476,576 - PFLU_RS19780 0.47 +0.1 4,476,682 + PFLU_RS19780 0.54 -1.0 4,476,704 - PFLU_RS19780 0.55 -1.1
Or see this region's nucleotide sequence