Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS18505

Experiment: Glucose (C) and L-Glutamine (N); with TAPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glucose (C) and L-Glutamine (N); with TAPS
4,186,600	+		PFLU_RS18500	0.17	+0.2
4,186,600	+		PFLU_RS18500	0.17	+0.3
4,186,600	+		PFLU_RS18500	0.17	+2.5
4,186,600	+		PFLU_RS18500	0.17	+0.8
4,186,600	+		PFLU_RS18500	0.17	-2.5
4,186,601	-		PFLU_RS18500	0.17	+1.5
4,186,601	-		PFLU_RS18500	0.17	+0.5
4,186,601	-		PFLU_RS18500	0.17	+0.5
4,186,601	-		PFLU_RS18500	0.17	+1.5
4,186,601	-		PFLU_RS18500	0.17	-0.3
4,186,601	-		PFLU_RS18500	0.17	-0.1
4,186,601	-		PFLU_RS18500	0.17	-0.2
4,186,770	+		PFLU_RS18500	0.34	-0.7
4,186,771	-		PFLU_RS18500	0.34	-2.2
4,186,771	-		PFLU_RS18500	0.34	-0.5
4,186,771	-		PFLU_RS18500	0.34	+0.5
4,186,771	-		PFLU_RS18500	0.34	-0.4
4,186,771	-		PFLU_RS18500	0.34	+0.2
4,186,783	+		PFLU_RS18500	0.35	+1.2
4,186,804	+		PFLU_RS18500	0.37	+0.2
4,186,804	+		PFLU_RS18500	0.37	-1.5
4,186,804	+		PFLU_RS18500	0.37	-0.9
4,186,804	+		PFLU_RS18500	0.37	-2.7
4,186,804	+		PFLU_RS18500	0.37	-0.2
4,186,805	-		PFLU_RS18500	0.37	+0.2
4,186,896	+		PFLU_RS18500	0.47	-0.1
4,186,896	+		PFLU_RS18500	0.47	-1.3
4,186,897	-		PFLU_RS18500	0.47	+0.2
4,186,897	-		PFLU_RS18500	0.47	+0.5
4,186,897	-		PFLU_RS18500	0.47	-0.1
4,186,980	+		PFLU_RS18500	0.55	-0.2
4,186,980	+		PFLU_RS18500	0.55	-0.8
4,186,980	+		PFLU_RS18500	0.55	+0.2
4,186,980	+		PFLU_RS18500	0.55	-0.2
4,186,980	+		PFLU_RS18500	0.55	-0.5
4,186,980	+		PFLU_RS18500	0.55	+0.5
4,186,980	+		PFLU_RS18500	0.55	-0.2
4,186,981	-		PFLU_RS18500	0.55	+0.7
4,186,981	-		PFLU_RS18500	0.55	-1.1
4,186,981	-		PFLU_RS18500	0.55	+2.2
4,186,981	-		PFLU_RS18500	0.55	+1.3
4,186,981	-		PFLU_RS18500	0.55	-0.1
4,186,981	-		PFLU_RS18500	0.55	+1.2
4,186,981	-		PFLU_RS18500	0.55	+0.7
4,186,981	-		PFLU_RS18500	0.55	+1.6
4,186,981	-		PFLU_RS18500	0.55	+0.4
4,186,981	-		PFLU_RS18500	0.55	+1.1
4,186,984	+		PFLU_RS18500	0.55	-0.4
4,186,984	+		PFLU_RS18500	0.55	-0.8
4,186,984	+		PFLU_RS18500	0.55	+0.3
4,186,985	-		PFLU_RS18500	0.56	+1.5
4,186,985	-		PFLU_RS18500	0.56	+0.7
4,186,985	-		PFLU_RS18500	0.56	+0.1
4,187,008	+		PFLU_RS18500	0.58	-1.8
4,187,041	+		PFLU_RS18500	0.61	-0.1
4,187,042	-		PFLU_RS18500	0.61	-2.4
4,187,042	-		PFLU_RS18500	0.61	+0.5
4,187,042	-		PFLU_RS18500	0.61	-0.4
4,187,096	+		PFLU_RS18500	0.67	-1.0
4,187,097	-		PFLU_RS18500	0.67	-1.1
4,187,110	+		PFLU_RS18500	0.68	+0.1
4,187,110	+		PFLU_RS18500	0.68	-1.1
4,187,111	-		PFLU_RS18500	0.68	-1.2
4,187,125	+		PFLU_RS18500	0.70	-0.4
4,187,125	+		PFLU_RS18500	0.70	-1.3
4,187,182	+		PFLU_RS18500	0.75	-1.7
4,187,182	+		PFLU_RS18500	0.75	+1.1
4,187,183	-		PFLU_RS18500	0.75	-1.1
4,187,183	-		PFLU_RS18500	0.75	+2.3
4,187,183	-		PFLU_RS18500	0.75	+1.5
4,187,185	+		PFLU_RS18500	0.76	-0.3
4,187,185	+		PFLU_RS18500	0.76	+1.8
4,187,185	+		PFLU_RS18500	0.76	-0.1
4,187,185	+		PFLU_RS18500	0.76	+0.6
4,187,185	+		PFLU_RS18500	0.76	-0.1
4,187,185	+		PFLU_RS18500	0.76	-0.5
4,187,185	+		PFLU_RS18500	0.76	+0.1
4,187,185	+		PFLU_RS18500	0.76	-0.5
4,187,186	-		PFLU_RS18500	0.76	-0.2
4,187,186	-		PFLU_RS18500	0.76	+0.7
4,187,186	-		PFLU_RS18500	0.76	-0.1
4,187,186	-		PFLU_RS18500	0.76	-1.2
4,187,186	-		PFLU_RS18500	0.76	-0.3
4,187,186	-		PFLU_RS18500	0.76	-1.2
4,187,225	-		PFLU_RS18500	0.80	-1.6
4,187,257	+		PFLU_RS18500	0.83	+0.8
4,187,257	+		PFLU_RS18500	0.83	+0.8
4,187,257	+		PFLU_RS18500	0.83	-0.7
4,187,257	+		PFLU_RS18500	0.83	+0.5
4,187,257	+		PFLU_RS18500	0.83	-0.4
4,187,257	+		PFLU_RS18500	0.83	+0.9
4,187,257	+		PFLU_RS18500	0.83	-0.4
4,187,258	-		PFLU_RS18500	0.83	+1.5
4,187,258	-		PFLU_RS18500	0.83	-2.1
4,187,258	-		PFLU_RS18500	0.83	+0.6
4,187,258	-		PFLU_RS18500	0.83	-0.8
4,187,258	-		PFLU_RS18500	0.83	-0.8
4,187,298	+		PFLU_RS18500	0.87	+0.0
4,187,298	+		PFLU_RS18500	0.87	-0.3
4,187,298	+		PFLU_RS18500	0.87	+0.2
4,187,298	+		PFLU_RS18500	0.87	-1.3
4,187,299	-		PFLU_RS18500	0.87	+1.2
4,187,299	-		PFLU_RS18500	0.87	+0.9
4,187,311	+		PFLU_RS18500	0.88	+0.2
4,187,311	+		PFLU_RS18500	0.88	-0.0
4,187,311	+		PFLU_RS18500	0.88	-1.4
4,187,311	+		PFLU_RS18500	0.88	+0.0
4,187,311	+		PFLU_RS18500	0.88	-1.3
4,187,311	+		PFLU_RS18500	0.88	-1.2
4,187,311	+		PFLU_RS18500	0.88	+0.4
4,187,311	+		PFLU_RS18500	0.88	+0.2
4,187,311	+		PFLU_RS18500	0.88	+1.3
4,187,311	+		PFLU_RS18500	0.88	-0.6
4,187,311	+		PFLU_RS18500	0.88	-3.2
4,187,311	+		PFLU_RS18500	0.88	-0.9
4,187,312	-		PFLU_RS18500	0.88	+1.5
4,187,312	-		PFLU_RS18500	0.88	+0.7
4,187,312	-		PFLU_RS18500	0.88	+1.5
4,187,312	-		PFLU_RS18500	0.88	-1.7
4,187,312	-		PFLU_RS18500	0.88	+0.9
4,187,312	-		PFLU_RS18500	0.88	-0.1
4,187,312	-		PFLU_RS18500	0.88	-3.6
4,187,312	-		PFLU_RS18500	0.88	+0.1
4,187,312	-		PFLU_RS18500	0.88	+0.5
4,187,312	-		PFLU_RS18500	0.88	+1.9
4,187,312	-		PFLU_RS18500	0.88	+0.9
4,187,312	-		PFLU_RS18500	0.88	-2.1
4,187,314	+		PFLU_RS18500	0.89	+0.7
4,187,314	+		PFLU_RS18500	0.89	-0.5
4,187,314	+		PFLU_RS18500	0.89	+0.3
4,187,314	+		PFLU_RS18500	0.89	+0.4
4,187,315	-		PFLU_RS18500	0.89	-0.8
4,187,315	-		PFLU_RS18500	0.89	-0.1
4,187,315	-		PFLU_RS18500	0.89	+3.5
4,187,315	-		PFLU_RS18500	0.89	-0.0
4,187,315	-		PFLU_RS18500	0.89	-0.7
4,187,315	-		PFLU_RS18500	0.89	-2.1
4,187,315	-		PFLU_RS18500	0.89	+0.1
4,187,379	+				+0.8
4,187,380	-				+1.5
4,187,428	+				-0.1
4,187,428	+				-0.1
4,187,428	+				-1.6
4,187,428	+				+1.2
4,187,428	+				+0.3
4,187,428	+				+1.0
4,187,429	-				+0.3
4,187,429	-				+0.0
4,187,429	-				-1.1
4,187,434	-				-0.3
4,187,434	-				+0.2
4,187,434	-				-0.4
4,187,434	-				-0.2
4,187,584	+				-0.6
4,187,584	+				-1.7
4,187,584	+				+1.8
4,187,584	+				-0.1
4,187,585	-				-1.9
4,187,585	-				-0.7
4,187,585	-				-1.3
4,187,585	-				-1.1
4,187,585	-				-1.8
4,187,585	-				+0.5
4,187,585	-				+0.8
4,187,589	+				+1.2
4,187,589	+				-0.7
4,187,589	+				-0.2
4,187,589	+				-2.9
4,187,590	-				+0.0
4,187,590	-				-0.6
4,187,782	+		PFLU_RS18505	0.13	+0.9
4,187,845	+		PFLU_RS18505	0.18	+0.2
4,187,847	+		PFLU_RS18505	0.18	-0.2
4,187,847	+		PFLU_RS18505	0.18	-1.1
4,187,847	+		PFLU_RS18505	0.18	+0.5
4,187,847	+		PFLU_RS18505	0.18	-0.1
4,187,847	+		PFLU_RS18505	0.18	-0.8
4,187,847	+		PFLU_RS18505	0.18	+0.5
4,187,847	+		PFLU_RS18505	0.18	+0.9
4,187,847	+		PFLU_RS18505	0.18	-1.5
4,187,847	+		PFLU_RS18505	0.18	-0.8
4,187,847	+		PFLU_RS18505	0.18	+4.1
4,187,847	+		PFLU_RS18505	0.18	-1.5
4,187,847	+		PFLU_RS18505	0.18	-0.1
4,187,847	+		PFLU_RS18505	0.18	-1.1
4,187,847	+		PFLU_RS18505	0.18	+1.1
4,187,847	+		PFLU_RS18505	0.18	-0.8
4,187,847	+		PFLU_RS18505	0.18	-0.1
4,187,847	+		PFLU_RS18505	0.18	-1.5
4,187,847	+		PFLU_RS18505	0.18	-2.3
4,187,847	+		PFLU_RS18505	0.18	-1.3
4,187,847	+		PFLU_RS18505	0.18	-0.8
4,187,848	-		PFLU_RS18505	0.18	+1.5
4,187,848	-		PFLU_RS18505	0.18	-0.1
4,187,848	-		PFLU_RS18505	0.18	-0.3
4,187,848	-		PFLU_RS18505	0.18	+1.2
4,187,848	-		PFLU_RS18505	0.18	-0.5
4,187,848	-		PFLU_RS18505	0.18	-2.8
4,187,848	-		PFLU_RS18505	0.18	-1.1
4,187,848	-		PFLU_RS18505	0.18	-0.5
4,187,848	-		PFLU_RS18505	0.18	+0.5
4,187,848	-		PFLU_RS18505	0.18	+0.5
4,187,848	-		PFLU_RS18505	0.18	-1.9
4,187,848	-		PFLU_RS18505	0.18	-1.1
4,187,848	-		PFLU_RS18505	0.18	+0.5
4,187,848	-		PFLU_RS18505	0.18	-0.8
4,187,848	-		PFLU_RS18505	0.18	-1.1
4,187,848	-		PFLU_RS18505	0.18	+3.5
4,187,848	-		PFLU_RS18505	0.18	-2.2
4,187,848	-		PFLU_RS18505	0.18	-1.5
4,187,848	-		PFLU_RS18505	0.18	-0.7
4,187,927	-		PFLU_RS18505	0.24	-1.8
4,187,933	+		PFLU_RS18505	0.24	-1.4
4,187,934	-		PFLU_RS18505	0.24	+0.5
4,187,947	-		PFLU_RS18505	0.25	-0.5
4,187,977	-		PFLU_RS18505	0.27	-1.3
4,187,977	-		PFLU_RS18505	0.27	-0.1
4,187,977	-		PFLU_RS18505	0.27	-0.1
4,187,977	-		PFLU_RS18505	0.27	-0.5
4,188,192	+		PFLU_RS18505	0.43	-0.8
4,188,192	+		PFLU_RS18505	0.43	+1.5
4,188,192	+		PFLU_RS18505	0.43	+0.9
4,188,192	+		PFLU_RS18505	0.43	-0.8
4,188,192	+		PFLU_RS18505	0.43	+0.5
4,188,192	+		PFLU_RS18505	0.43	-1.7
4,188,192	+		PFLU_RS18505	0.43	-0.8
4,188,192	+		PFLU_RS18505	0.43	+0.9
4,188,192	+		PFLU_RS18505	0.43	+0.5
4,188,192	+		PFLU_RS18505	0.43	-0.5
4,188,192	+		PFLU_RS18505	0.43	-0.1
4,188,193	-		PFLU_RS18505	0.43	-1.5
4,188,193	-		PFLU_RS18505	0.43	-1.5
4,188,193	-		PFLU_RS18505	0.43	-0.1
4,188,193	-		PFLU_RS18505	0.43	+0.9
4,188,193	-		PFLU_RS18505	0.43	-0.5
4,188,193	-		PFLU_RS18505	0.43	+1.5
4,188,193	-		PFLU_RS18505	0.43	-0.8
4,188,193	-		PFLU_RS18505	0.43	-0.1
4,188,193	-		PFLU_RS18505	0.43	-0.5
4,188,193	-		PFLU_RS18505	0.43	-0.5
4,188,193	-		PFLU_RS18505	0.43	-1.2
4,188,193	-		PFLU_RS18505	0.43	-0.1
4,188,193	-		PFLU_RS18505	0.43	+0.5
4,188,193	-		PFLU_RS18505	0.43	-1.8
4,188,193	-		PFLU_RS18505	0.43	-2.3
4,188,193	-		PFLU_RS18505	0.43	-0.5
4,188,252	+		PFLU_RS18505	0.47	+0.5
4,188,252	+		PFLU_RS18505	0.47	+0.5
4,188,252	+		PFLU_RS18505	0.47	-0.1
4,188,253	-		PFLU_RS18505	0.47	-0.1
4,188,253	-		PFLU_RS18505	0.47	-0.8
4,188,253	-		PFLU_RS18505	0.47	-0.5
4,188,253	-		PFLU_RS18505	0.47	-0.8
4,188,253	-		PFLU_RS18505	0.47	-1.3
4,188,336	+		PFLU_RS18505	0.53	-0.5
4,188,336	+		PFLU_RS18505	0.53	+0.5
4,188,336	+		PFLU_RS18505	0.53	-0.5
4,188,337	-		PFLU_RS18505	0.53	-1.1
4,188,337	-		PFLU_RS18505	0.53	-0.7
4,188,354	+		PFLU_RS18505	0.54	-1.1
4,188,354	+		PFLU_RS18505	0.54	-0.1
4,188,354	+		PFLU_RS18505	0.54	+0.3
4,188,354	+		PFLU_RS18505	0.54	-0.5
4,188,354	+		PFLU_RS18505	0.54	-0.5
4,188,354	+		PFLU_RS18505	0.54	+0.2
4,188,487	-		PFLU_RS18505	0.64	-0.2
4,188,540	+		PFLU_RS18505	0.68	-0.8
4,188,540	+		PFLU_RS18505	0.68	-0.9
4,188,541	-		PFLU_RS18505	0.68	-0.3
4,188,541	-		PFLU_RS18505	0.68	-0.8
4,188,541	-		PFLU_RS18505	0.68	-1.1
4,188,994	-				-0.5