Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS11600

Experiment: Glucose (C) and L-Glutamine (N); with TAPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glucose (C) and L-Glutamine (N); with TAPS
2,571,969	+		PFLU_RS11595	0.16	+1.4
2,571,970	-		PFLU_RS11595	0.16	+0.4
2,571,996	+		PFLU_RS11595	0.19	-0.9
2,571,996	+		PFLU_RS11595	0.19	-0.3
2,571,996	+		PFLU_RS11595	0.19	+2.8
2,571,996	+		PFLU_RS11595	0.19	+0.6
2,571,996	+		PFLU_RS11595	0.19	-1.3
2,571,996	+		PFLU_RS11595	0.19	+1.3
2,571,996	+		PFLU_RS11595	0.19	-0.4
2,571,996	+		PFLU_RS11595	0.19	-0.7
2,571,997	-		PFLU_RS11595	0.19	-0.3
2,571,997	-		PFLU_RS11595	0.19	-1.0
2,571,997	-		PFLU_RS11595	0.19	+0.4
2,571,997	-		PFLU_RS11595	0.19	-0.7
2,571,997	-		PFLU_RS11595	0.19	-2.6
2,572,026	+		PFLU_RS11595	0.21	-2.3
2,572,026	+		PFLU_RS11595	0.21	-0.5
2,572,026	+		PFLU_RS11595	0.21	-1.4
2,572,026	+		PFLU_RS11595	0.21	+1.3
2,572,026	+		PFLU_RS11595	0.21	+0.0
2,572,026	+		PFLU_RS11595	0.21	-1.5
2,572,027	-		PFLU_RS11595	0.22	-0.6
2,572,027	-		PFLU_RS11595	0.22	+0.6
2,572,027	-		PFLU_RS11595	0.22	-0.0
2,572,027	-		PFLU_RS11595	0.22	+0.1
2,572,027	-		PFLU_RS11595	0.22	-2.3
2,572,027	-		PFLU_RS11595	0.22	-0.3
2,572,056	+		PFLU_RS11595	0.24	+0.4
2,572,057	-		PFLU_RS11595	0.24	+0.9
2,572,057	-		PFLU_RS11595	0.24	+0.3
2,572,229	+		PFLU_RS11595	0.41	+0.6
2,572,230	-		PFLU_RS11595	0.41	-0.6
2,572,230	-		PFLU_RS11595	0.41	-0.4
2,572,230	-		PFLU_RS11595	0.41	-2.6
2,572,233	+		PFLU_RS11595	0.41	+1.7
2,572,233	+		PFLU_RS11595	0.41	+0.1
2,572,233	+		PFLU_RS11595	0.41	-0.6
2,572,233	+		PFLU_RS11595	0.41	-0.6
2,572,233	+		PFLU_RS11595	0.41	+1.4
2,572,233	+		PFLU_RS11595	0.41	-1.2
2,572,233	+		PFLU_RS11595	0.41	-0.4
2,572,233	+		PFLU_RS11595	0.41	-2.3
2,572,233	+		PFLU_RS11595	0.41	+0.1
2,572,233	+		PFLU_RS11595	0.41	-0.6
2,572,233	+		PFLU_RS11595	0.41	-0.7
2,572,233	+		PFLU_RS11595	0.41	-0.5
2,572,233	+		PFLU_RS11595	0.41	+0.2
2,572,234	-		PFLU_RS11595	0.41	+1.9
2,572,234	-		PFLU_RS11595	0.41	-0.4
2,572,234	-		PFLU_RS11595	0.41	-0.1
2,572,234	-		PFLU_RS11595	0.41	+0.8
2,572,234	-		PFLU_RS11595	0.41	+0.4
2,572,234	-		PFLU_RS11595	0.41	-0.7
2,572,234	-		PFLU_RS11595	0.41	-0.1
2,572,234	-		PFLU_RS11595	0.41	-0.6
2,572,234	-		PFLU_RS11595	0.41	-0.6
2,572,234	-		PFLU_RS11595	0.41	-0.6
2,572,234	-		PFLU_RS11595	0.41	+0.7
2,572,241	+		PFLU_RS11595	0.42	+1.0
2,572,274	+		PFLU_RS11595	0.45	+0.0
2,572,274	+		PFLU_RS11595	0.45	-2.2
2,572,287	+		PFLU_RS11595	0.46	-0.6
2,572,287	+		PFLU_RS11595	0.46	-0.5
2,572,287	+		PFLU_RS11595	0.46	-1.4
2,572,287	+		PFLU_RS11595	0.46	+0.1
2,572,287	+		PFLU_RS11595	0.46	-0.9
2,572,287	+		PFLU_RS11595	0.46	+1.9
2,572,288	-		PFLU_RS11595	0.47	+1.4
2,572,288	-		PFLU_RS11595	0.47	-0.9
2,572,288	-		PFLU_RS11595	0.47	+0.1
2,572,288	-		PFLU_RS11595	0.47	+0.1
2,572,290	+		PFLU_RS11595	0.47	-0.9
2,572,290	+		PFLU_RS11595	0.47	-0.7
2,572,290	+		PFLU_RS11595	0.47	+1.4
2,572,290	+		PFLU_RS11595	0.47	-0.1
2,572,291	-		PFLU_RS11595	0.47	-0.1
2,572,291	-		PFLU_RS11595	0.47	+0.4
2,572,315	+		PFLU_RS11595	0.49	+0.1
2,572,315	+		PFLU_RS11595	0.49	-0.9
2,572,335	-		PFLU_RS11595	0.51	-0.4
2,572,356	+		PFLU_RS11595	0.53	+1.0
2,572,356	+		PFLU_RS11595	0.53	+1.0
2,572,356	+		PFLU_RS11595	0.53	+0.6
2,572,356	+		PFLU_RS11595	0.53	+0.9
2,572,356	+		PFLU_RS11595	0.53	-0.2
2,572,357	-		PFLU_RS11595	0.53	-1.6
2,572,357	-		PFLU_RS11595	0.53	-1.3
2,572,357	-		PFLU_RS11595	0.53	-0.1
2,572,424	+		PFLU_RS11595	0.60	+0.4
2,572,431	+		PFLU_RS11595	0.60	-0.1
2,572,432	-		PFLU_RS11595	0.60	-1.4
2,572,465	+		PFLU_RS11595	0.63	+0.4
2,572,465	+		PFLU_RS11595	0.63	-0.1
2,572,466	-		PFLU_RS11595	0.64	+0.8
2,572,492	+		PFLU_RS11595	0.66	-1.0
2,572,492	+		PFLU_RS11595	0.66	+1.1
2,572,493	-		PFLU_RS11595	0.66	-0.8
2,572,529	+		PFLU_RS11595	0.70	+0.9
2,572,530	-		PFLU_RS11595	0.70	+0.3
2,572,677	+		PFLU_RS11595	0.84	+1.0
2,572,677	+		PFLU_RS11595	0.84	-0.4
2,572,677	+		PFLU_RS11595	0.84	+1.4
2,572,677	+		PFLU_RS11595	0.84	-0.9
2,572,677	+		PFLU_RS11595	0.84	-1.4
2,572,677	+		PFLU_RS11595	0.84	+0.4
2,572,677	+		PFLU_RS11595	0.84	+1.4
2,572,677	+		PFLU_RS11595	0.84	-0.3
2,572,678	-		PFLU_RS11595	0.84	+1.7
2,572,678	-		PFLU_RS11595	0.84	+0.6
2,572,678	-		PFLU_RS11595	0.84	-0.7
2,572,678	-		PFLU_RS11595	0.84	+0.7
2,572,678	-		PFLU_RS11595	0.84	+0.6
2,572,678	-		PFLU_RS11595	0.84	+1.3
2,572,678	-		PFLU_RS11595	0.84	+1.1
2,572,678	-		PFLU_RS11595	0.84	+1.0
2,572,678	-		PFLU_RS11595	0.84	+1.4
2,572,678	-		PFLU_RS11595	0.84	-0.6
2,572,707	-		PFLU_RS11595	0.87	+1.8
2,572,707	-		PFLU_RS11595	0.87	+2.0
2,572,721	+		PFLU_RS11595	0.88	+0.3
2,572,722	-		PFLU_RS11595	0.88	+1.9
2,572,758	+				-1.4
2,572,759	-				-1.7
2,572,759	-				-1.6
2,572,759	-				+1.8
2,572,759	-				-1.1
2,572,791	+				+0.7
2,572,792	-				-0.1
2,572,792	-				-0.6
2,572,792	-				-1.9
2,572,792	-				+0.6
2,572,795	+				+0.4
2,572,795	+				-0.3
2,572,795	+				+1.4
2,572,795	+				-1.1
2,572,795	+				-0.4
2,572,795	+				-0.8
2,572,795	+				-0.2
2,572,796	-				+1.0
2,572,796	-				+0.5
2,572,796	-				-0.1
2,572,796	-				+1.4
2,572,796	-				+2.0
2,572,796	-				-2.3
2,572,796	-				+0.3
2,572,796	-				-0.1
2,572,796	-				+0.6
2,573,103	+		PFLU_RS11600	0.56	-1.3
2,573,103	+		PFLU_RS11600	0.56	+0.1
2,573,126	-		PFLU_RS11600	0.61	+0.2
2,573,126	-		PFLU_RS11600	0.61	+0.2
2,573,126	-		PFLU_RS11600	0.61	-0.7
2,573,189	+		PFLU_RS11600	0.75	-1.2
2,573,189	+		PFLU_RS11600	0.75	+0.4
2,573,189	+		PFLU_RS11600	0.75	-1.1
2,573,190	-		PFLU_RS11600	0.75	+0.7
2,573,190	-		PFLU_RS11600	0.75	-1.7
2,573,190	-		PFLU_RS11600	0.75	+0.1
2,573,190	-		PFLU_RS11600	0.75	-1.1
2,573,190	-		PFLU_RS11600	0.75	+0.4
2,573,190	-		PFLU_RS11600	0.75	-0.9
2,573,190	-		PFLU_RS11600	0.75	-1.4
2,573,285	-				-1.6
2,573,553	+		PFLU_RS11605	0.81	-0.1
2,573,554	-		PFLU_RS11605	0.82	-0.4
2,573,554	-		PFLU_RS11605	0.82	-0.8
2,573,554	-		PFLU_RS11605	0.82	-1.4
2,573,555	+		PFLU_RS11605	0.82	-0.1
2,573,555	+		PFLU_RS11605	0.82	+2.0
2,573,555	+		PFLU_RS11605	0.82	+2.4
2,573,555	+		PFLU_RS11605	0.82	+1.0
2,573,555	+		PFLU_RS11605	0.82	-0.7
2,573,555	+		PFLU_RS11605	0.82	+0.8
2,573,555	+		PFLU_RS11605	0.82	+0.9
2,573,555	+		PFLU_RS11605	0.82	+3.4
2,573,556	-		PFLU_RS11605	0.82	-1.1
2,573,556	-		PFLU_RS11605	0.82	-0.1
2,573,556	-		PFLU_RS11605	0.82	-0.0
2,573,556	-		PFLU_RS11605	0.82	+1.0
2,573,556	-		PFLU_RS11605	0.82	+0.1
2,573,556	-		PFLU_RS11605	0.82	+0.4
2,573,556	-		PFLU_RS11605	0.82	+0.5
2,573,556	-		PFLU_RS11605	0.82	+0.8
2,573,556	-		PFLU_RS11605	0.82	-0.9
2,573,556	-		PFLU_RS11605	0.82	+0.9
2,573,556	-		PFLU_RS11605	0.82	-0.4
2,573,556	-		PFLU_RS11605	0.82	+1.0
2,573,556	-		PFLU_RS11605	0.82	+1.7
2,573,596	+				-0.8
2,573,596	+				-1.4
2,573,597	-				-0.1
2,573,620	+				+0.3
2,573,620	+				-0.9
2,573,621	-				-0.7
2,573,641	+				+0.1
2,573,642	-				+1.3
2,573,642	-				+0.1
2,573,777	+				-0.1
2,573,777	+				+1.8
2,573,777	+				-0.3
2,573,777	+				-1.4
2,573,777	+				+0.1
2,573,777	+				+0.2
2,573,777	+				-0.1
2,573,777	+				+0.7
2,573,777	+				+1.3
2,573,777	+				+0.4
2,573,777	+				+1.0
2,573,777	+				+0.4
2,573,778	-				-0.2
2,573,778	-				-1.1
2,573,778	-				-0.7
2,573,778	-				+0.1
2,573,778	-				-1.6
2,573,778	-				-2.6
2,573,778	-				+0.3
2,573,778	-				-0.7
2,573,778	-				+0.7
2,573,778	-				+0.3
2,573,778	-				-2.1
2,573,778	-				-0.4
2,573,778	-				-0.7
2,573,778	-				-2.8
2,573,894	-		PFLU_RS11610	0.18	-0.3
2,573,894	-		PFLU_RS11610	0.18	+0.4
2,574,052	+		PFLU_RS11610	0.32	+0.1
2,574,052	+		PFLU_RS11610	0.32	-0.5
2,574,052	+		PFLU_RS11610	0.32	-0.9
2,574,052	+		PFLU_RS11610	0.32	-0.1
2,574,052	+		PFLU_RS11610	0.32	-0.6
2,574,052	+		PFLU_RS11610	0.32	+1.4
2,574,052	+		PFLU_RS11610	0.32	-0.3
2,574,053	-		PFLU_RS11610	0.32	-0.7
2,574,053	-		PFLU_RS11610	0.32	+0.9
2,574,053	-		PFLU_RS11610	0.32	-0.5
2,574,053	-		PFLU_RS11610	0.32	+1.7
2,574,245	+		PFLU_RS11610	0.50	+0.4
2,574,245	+		PFLU_RS11610	0.50	-0.3
2,574,246	-		PFLU_RS11610	0.50	+0.4
2,574,296	+		PFLU_RS11610	0.55	+0.3
2,574,297	-		PFLU_RS11610	0.55	+0.6
2,574,297	-		PFLU_RS11610	0.55	-1.1
2,574,297	-		PFLU_RS11610	0.55	+0.0