Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS10045

Experiment: Glucose (C) and L-Glutamine (N); with TAPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glucose (C) and L-Glutamine (N); with TAPS
2,215,617	+				+0.0
2,215,617	+				+2.6
2,215,706	+				-2.6
2,215,709	+				+1.3
2,215,709	+				+0.8
2,215,709	+				+0.6
2,215,709	+				-0.8
2,215,709	+				+0.5
2,215,709	+				-1.2
2,215,709	+				+0.4
2,215,710	-				+1.9
2,215,710	-				-0.1
2,215,710	-				+0.4
2,215,710	-				-2.3
2,215,710	-				+0.3
2,215,710	-				-0.5
2,215,735	+				+0.6
2,215,735	+				+0.0
2,215,736	-				+0.2
2,215,736	-				+0.5
2,215,736	-				-0.7
2,215,736	-				+0.2
2,215,750	+				-0.4
2,215,751	-				+0.7
2,215,751	-				+0.6
2,215,751	-				-0.9
2,215,766	+		PFLU_RS10040	0.10	+0.9
2,215,766	+		PFLU_RS10040	0.10	-1.3
2,215,766	+		PFLU_RS10040	0.10	+0.9
2,215,766	+		PFLU_RS10040	0.10	-0.4
2,215,767	-		PFLU_RS10040	0.10	+0.6
2,215,767	-		PFLU_RS10040	0.10	+0.6
2,215,819	+		PFLU_RS10040	0.16	-1.5
2,215,819	+		PFLU_RS10040	0.16	+1.3
2,215,819	+		PFLU_RS10040	0.16	-0.6
2,215,819	+		PFLU_RS10040	0.16	-1.8
2,215,819	+		PFLU_RS10040	0.16	-0.4
2,215,819	+		PFLU_RS10040	0.16	-0.1
2,215,819	+		PFLU_RS10040	0.16	-1.5
2,215,819	+		PFLU_RS10040	0.16	+0.9
2,215,819	+		PFLU_RS10040	0.16	+0.2
2,215,819	+		PFLU_RS10040	0.16	-0.6
2,215,820	-		PFLU_RS10040	0.16	-0.1
2,215,820	-		PFLU_RS10040	0.16	-1.5
2,215,820	-		PFLU_RS10040	0.16	-1.2
2,215,820	-		PFLU_RS10040	0.16	+0.6
2,215,820	-		PFLU_RS10040	0.16	+0.3
2,215,820	-		PFLU_RS10040	0.16	+0.4
2,215,820	-		PFLU_RS10040	0.16	-0.5
2,215,820	-		PFLU_RS10040	0.16	-0.6
2,215,820	-		PFLU_RS10040	0.16	+0.8
2,215,820	-		PFLU_RS10040	0.16	+0.8
2,215,820	-		PFLU_RS10040	0.16	-0.2
2,215,972	+		PFLU_RS10040	0.33	+1.3
2,215,972	+		PFLU_RS10040	0.33	-0.5
2,215,972	+		PFLU_RS10040	0.33	+0.3
2,215,979	-		PFLU_RS10040	0.33	-1.7
2,215,979	-		PFLU_RS10040	0.33	-1.9
2,215,979	-		PFLU_RS10040	0.33	+2.1
2,215,989	+		PFLU_RS10040	0.35	-1.6
2,215,990	-		PFLU_RS10040	0.35	+0.0
2,215,990	-		PFLU_RS10040	0.35	-1.4
2,216,095	+		PFLU_RS10040	0.46	-1.4
2,216,095	+		PFLU_RS10040	0.46	-1.5
2,216,145	-		PFLU_RS10040	0.51	-1.5
2,216,183	+		PFLU_RS10040	0.56	+2.0
2,216,183	+		PFLU_RS10040	0.56	+0.0
2,216,184	-		PFLU_RS10040	0.56	+1.0
2,216,184	-		PFLU_RS10040	0.56	+0.5
2,216,389	+		PFLU_RS10040	0.78	-1.8
2,216,389	+		PFLU_RS10040	0.78	-0.5
2,216,461	+		PFLU_RS10040	0.86	+0.6
2,216,461	+		PFLU_RS10040	0.86	-0.7
2,216,461	+		PFLU_RS10040	0.86	+0.1
2,216,461	+		PFLU_RS10040	0.86	+0.5
2,216,461	+		PFLU_RS10040	0.86	-1.7
2,216,461	+		PFLU_RS10040	0.86	-0.2
2,216,461	+		PFLU_RS10040	0.86	-0.3
2,216,461	+		PFLU_RS10040	0.86	+0.8
2,216,462	-		PFLU_RS10040	0.86	+0.1
2,216,462	-		PFLU_RS10040	0.86	+0.4
2,216,462	-		PFLU_RS10040	0.86	-0.2
2,216,467	+		PFLU_RS10040	0.86	-0.4
2,216,467	+		PFLU_RS10040	0.86	+1.2
2,216,467	+		PFLU_RS10040	0.86	+0.1
2,216,468	-		PFLU_RS10040	0.87	-0.7
2,216,468	-		PFLU_RS10040	0.87	-1.3
2,216,468	-		PFLU_RS10040	0.87	-0.9
2,216,468	-		PFLU_RS10040	0.87	-0.7
2,216,468	-		PFLU_RS10040	0.87	-1.4
2,216,470	+		PFLU_RS10040	0.87	-0.3
2,216,470	+		PFLU_RS10040	0.87	+0.3
2,216,470	+		PFLU_RS10040	0.87	-0.5
2,216,470	+		PFLU_RS10040	0.87	+0.2
2,216,470	+		PFLU_RS10040	0.87	-1.4
2,216,470	+		PFLU_RS10040	0.87	-1.0
2,216,470	+		PFLU_RS10040	0.87	-0.5
2,216,470	+		PFLU_RS10040	0.87	+1.3
2,216,471	-		PFLU_RS10040	0.87	-0.1
2,216,471	-		PFLU_RS10040	0.87	+0.2
2,216,471	-		PFLU_RS10040	0.87	-0.8
2,216,504	+				-1.2
2,216,505	-				-1.0
2,216,585	+				-0.5
2,216,585	+				-2.9
2,216,585	+				-1.2
2,216,585	+				-2.2
2,216,585	+				+0.2
2,216,585	+				+1.5
2,216,586	-				+0.6
2,216,586	-				+0.0
2,216,586	-				-0.4
2,216,586	-				-0.1
2,216,811	-		PFLU_RS10045	0.36	-1.2
2,216,978	+		PFLU_RS10045	0.65	-1.7
2,216,979	-		PFLU_RS10045	0.66	-0.8
2,216,979	-		PFLU_RS10045	0.66	-2.4
2,216,979	-		PFLU_RS10045	0.66	-1.0
2,216,979	-		PFLU_RS10045	0.66	-1.3
2,216,979	-		PFLU_RS10045	0.66	+0.8
2,216,979	-		PFLU_RS10045	0.66	-1.0
2,217,119	+				+2.1
2,217,119	+				+1.9
2,217,119	+				+0.6
2,217,119	+				+1.6
2,217,120	-				+1.1
2,217,120	-				-0.2
2,217,120	-				-1.4
2,217,120	-				-1.0
2,217,120	-				-1.4
2,217,120	-				-0.6
2,217,120	-				-1.3
2,217,151	+				+1.2
2,217,151	+				+0.3
2,217,151	+				+1.0
2,217,151	+				-0.2
2,217,151	+				-0.1
2,217,151	+				+1.4
2,217,151	+				+0.6
2,217,151	+				-2.1
2,217,152	-				-1.8
2,217,152	-				+0.6
2,217,165	+				-1.3
2,217,165	+				+0.6
2,217,166	-				-0.7
2,217,166	-				-0.6
2,217,166	-				-0.6
2,217,235	+		PFLU_RS10050	0.20	+1.0
2,217,235	+		PFLU_RS10050	0.20	-2.2
2,217,235	+		PFLU_RS10050	0.20	-0.1
2,217,235	+		PFLU_RS10050	0.20	-0.1
2,217,235	+		PFLU_RS10050	0.20	-0.4
2,217,235	+		PFLU_RS10050	0.20	+0.6
2,217,235	+		PFLU_RS10050	0.20	-1.8
2,217,235	+		PFLU_RS10050	0.20	-1.3
2,217,235	+		PFLU_RS10050	0.20	+0.0
2,217,235	+		PFLU_RS10050	0.20	-0.4
2,217,235	+		PFLU_RS10050	0.20	+0.5
2,217,235	+		PFLU_RS10050	0.20	+0.5
2,217,235	+		PFLU_RS10050	0.20	+0.8
2,217,235	+		PFLU_RS10050	0.20	+0.6
2,217,235	+		PFLU_RS10050	0.20	+0.3
2,217,235	+		PFLU_RS10050	0.20	-1.4
2,217,235	+		PFLU_RS10050	0.20	-1.3
2,217,235	+		PFLU_RS10050	0.20	+0.3
2,217,235	+		PFLU_RS10050	0.20	-0.5
2,217,235	+		PFLU_RS10050	0.20	+0.6
2,217,235	+		PFLU_RS10050	0.20	-0.5
2,217,235	+		PFLU_RS10050	0.20	+0.4
2,217,235	+		PFLU_RS10050	0.20	-0.7
2,217,235	+		PFLU_RS10050	0.20	+0.4
2,217,236	-		PFLU_RS10050	0.21	+0.6
2,217,236	-		PFLU_RS10050	0.21	+0.3
2,217,236	-		PFLU_RS10050	0.21	+0.0
2,217,236	-		PFLU_RS10050	0.21	+2.0
2,217,236	-		PFLU_RS10050	0.21	-0.4
2,217,236	-		PFLU_RS10050	0.21	+0.6
2,217,236	-		PFLU_RS10050	0.21	-0.2
2,217,236	-		PFLU_RS10050	0.21	+2.0
2,217,236	-		PFLU_RS10050	0.21	+0.4
2,217,236	-		PFLU_RS10050	0.21	-0.1
2,217,236	-		PFLU_RS10050	0.21	-0.9
2,217,236	-		PFLU_RS10050	0.21	+0.8
2,217,236	-		PFLU_RS10050	0.21	+0.5
2,217,236	-		PFLU_RS10050	0.21	-0.0
2,217,236	-		PFLU_RS10050	0.21	+0.6
2,217,236	-		PFLU_RS10050	0.21	-1.7
2,217,236	-		PFLU_RS10050	0.21	+0.6
2,217,236	-		PFLU_RS10050	0.21	-0.5
2,217,236	-		PFLU_RS10050	0.21	+0.4
2,217,236	-		PFLU_RS10050	0.21	-0.5
2,217,438	-		PFLU_RS10050	0.82	-0.2
2,217,502	+				+0.0
2,217,502	+				-0.6
2,217,503	-				-0.3
2,217,503	-				-0.2
2,217,503	-				-0.5
2,217,503	-				+1.6
2,217,529	+				-1.0
2,217,530	-				+1.2
2,217,530	-				+1.6
2,217,723	+		PFLU_RS10055	0.43	-1.9
2,217,723	+		PFLU_RS10055	0.43	-0.5
2,217,723	+		PFLU_RS10055	0.43	-0.2
2,217,724	-		PFLU_RS10055	0.43	-0.3
2,217,724	-		PFLU_RS10055	0.43	-0.3
2,217,724	-		PFLU_RS10055	0.43	+0.5
2,217,724	-		PFLU_RS10055	0.43	-1.8
2,217,724	-		PFLU_RS10055	0.43	-1.0
2,217,918	+		PFLU_RS10055	0.79	-0.5
2,217,918	+		PFLU_RS10055	0.79	+1.1
2,217,918	+		PFLU_RS10055	0.79	-0.2
2,217,918	+		PFLU_RS10055	0.79	+0.0
2,217,918	+		PFLU_RS10055	0.79	+0.9
2,217,919	-		PFLU_RS10055	0.79	-0.4
2,217,919	-		PFLU_RS10055	0.79	-1.4
2,217,965	-		PFLU_RS10055	0.88	-0.1
2,217,965	-		PFLU_RS10055	0.88	-0.2
2,218,011	-				-0.8