Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS14195

Experiment: Glucose (C) and L-Glutamine (N); with TAPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glucose (C) and L-Glutamine (N); with TAPS
3,174,985	-		PFLU_RS14190	0.24	-0.6
3,175,019	+		PFLU_RS14190	0.28	+0.4
3,175,019	+		PFLU_RS14190	0.28	+2.0
3,175,020	-		PFLU_RS14190	0.29	+2.4
3,175,020	-		PFLU_RS14190	0.29	+0.5
3,175,020	-		PFLU_RS14190	0.29	+0.7
3,175,055	+		PFLU_RS14190	0.33	+0.9
3,175,056	-		PFLU_RS14190	0.33	-0.8
3,175,239	-		PFLU_RS14190	0.55	+0.6
3,175,248	+		PFLU_RS14190	0.56	+0.8
3,175,249	-		PFLU_RS14190	0.56	-0.4
3,175,249	-		PFLU_RS14190	0.56	-0.2
3,175,284	+		PFLU_RS14190	0.60	-0.6
3,175,284	+		PFLU_RS14190	0.60	+0.6
3,175,284	+		PFLU_RS14190	0.60	-0.2
3,175,284	+		PFLU_RS14190	0.60	+1.8
3,175,285	-		PFLU_RS14190	0.60	-0.6
3,175,325	+		PFLU_RS14190	0.65	-2.1
3,175,325	+		PFLU_RS14190	0.65	-1.1
3,175,401	+		PFLU_RS14190	0.74	-0.5
3,175,401	+		PFLU_RS14190	0.74	+1.0
3,175,401	+		PFLU_RS14190	0.74	+1.8
3,175,402	-		PFLU_RS14190	0.74	-0.5
3,175,402	-		PFLU_RS14190	0.74	-1.1
3,175,402	-		PFLU_RS14190	0.74	-0.9
3,175,456	+		PFLU_RS14190	0.81	-1.9
3,175,483	-		PFLU_RS14190	0.84	+1.1
3,175,568	-				-0.6
3,175,615	+				-0.3
3,175,615	+				+0.7
3,175,615	+				-0.3
3,175,615	+				+0.4
3,175,615	+				+0.2
3,175,615	+				+0.8
3,175,615	+				-0.2
3,175,615	+				-0.3
3,175,615	+				+1.4
3,175,616	-				+0.4
3,175,616	-				+0.1
3,175,616	-				-0.6
3,175,616	-				-0.6
3,175,616	-				-0.5
3,175,616	-				+0.8
3,175,616	-				-0.2
3,175,616	-				+0.0
3,175,629	+				-0.6
3,175,629	+				+1.9
3,175,629	+				+0.8
3,175,629	+				-2.5
3,175,629	+				-0.3
3,175,629	+				-1.3
3,175,629	+				+0.3
3,175,629	+				+2.1
3,175,630	-				+1.7
3,175,630	-				-1.6
3,175,633	+				-0.8
3,175,633	+				+0.0
3,175,633	+				+0.5
3,175,633	+				+1.7
3,175,633	+				+0.5
3,175,633	+				+0.7
3,175,633	+				+2.4
3,175,633	+				-1.1
3,175,634	-				-0.7
3,175,634	-				-0.6
3,175,634	-				-2.6
3,175,665	-				-2.4
3,175,705	+				-0.4
3,175,706	-				-1.2
3,175,706	-				-0.3
3,175,706	-				+0.0
3,175,722	+				-0.2
3,175,722	+				+1.9
3,175,723	-				+0.9
3,175,723	-				-2.1
3,175,723	-				-2.4
3,175,723	-				-0.9
3,175,726	+				+0.5
3,175,726	+				+0.8
3,175,726	+				-0.3
3,175,727	-				+0.1
3,175,727	-				+0.5
3,175,727	-				-0.8
3,175,747	-				-2.8
3,175,747	-				-0.2
3,175,752	+				+0.4
3,175,753	-				+0.5
3,175,774	-				+0.8
3,175,774	-				+0.4
3,175,805	-				+1.8
3,175,810	+				+0.4
3,175,927	+		PFLU_RS14195	0.41	-1.4
3,175,927	+		PFLU_RS14195	0.41	-0.2
3,175,928	-		PFLU_RS14195	0.41	-1.8
3,175,928	-		PFLU_RS14195	0.41	-0.0
3,175,928	-		PFLU_RS14195	0.41	-1.6
3,176,087	+				-0.2
3,176,087	+				-0.8
3,176,087	+				+1.2
3,176,087	+				+1.7
3,176,087	+				+1.7
3,176,087	+				+3.0
3,176,087	+				+1.3
3,176,087	+				-1.2
3,176,087	+				+2.8
3,176,087	+				-0.1
3,176,087	+				+1.4
3,176,087	+				-0.9
3,176,087	+				+0.2
3,176,087	+				+0.2
3,176,087	+				+0.2
3,176,087	+				-0.2
3,176,087	+				-0.2
3,176,087	+				-0.9
3,176,087	+				+1.2
3,176,087	+				+1.4
3,176,087	+				+2.4
3,176,087	+				-0.7
3,176,088	-				+0.4
3,176,088	-				-0.3
3,176,088	-				-1.8
3,176,088	-				+0.2
3,176,088	-				-0.5
3,176,088	-				-0.5
3,176,088	-				-2.6
3,176,088	-				-0.2
3,176,088	-				-0.6
3,176,088	-				+0.4
3,176,088	-				+1.0
3,176,125	+				+1.4
3,176,125	+				+0.4
3,176,125	+				-2.1
3,176,125	+				+0.6
3,176,125	+				-0.2
3,176,126	-				+0.3
3,176,126	-				-1.8
3,176,126	-				-1.0
3,176,126	-				+1.9
3,176,126	-				+0.0
3,176,126	-				-0.7
3,176,126	-				-1.3
3,176,134	-				-0.9
3,176,148	+				-0.7
3,176,148	+				+1.1
3,176,149	-				+1.6
3,176,149	-				-0.2
3,176,391	+		PFLU_RS14200	0.23	+0.0
3,176,391	+		PFLU_RS14200	0.23	-0.1
3,176,391	+		PFLU_RS14200	0.23	-1.2
3,176,391	+		PFLU_RS14200	0.23	+0.7
3,176,391	+		PFLU_RS14200	0.23	+0.2
3,176,391	+		PFLU_RS14200	0.23	-1.8
3,176,391	+		PFLU_RS14200	0.23	+2.4
3,176,392	-		PFLU_RS14200	0.23	+1.4
3,176,392	-		PFLU_RS14200	0.23	-0.3
3,176,392	-		PFLU_RS14200	0.23	+1.4
3,176,392	-		PFLU_RS14200	0.23	-0.9
3,176,462	+		PFLU_RS14200	0.29	-0.6
3,176,462	+		PFLU_RS14200	0.29	+0.8
3,176,462	+		PFLU_RS14200	0.29	-0.2
3,176,462	+		PFLU_RS14200	0.29	-0.2
3,176,462	+		PFLU_RS14200	0.29	-0.5
3,176,463	-		PFLU_RS14200	0.29	+2.0
3,176,463	-		PFLU_RS14200	0.29	-2.6
3,176,463	-		PFLU_RS14200	0.29	+1.7
3,176,463	-		PFLU_RS14200	0.29	+0.3
3,176,639	+		PFLU_RS14200	0.44	+0.1
3,176,640	-		PFLU_RS14200	0.44	+2.2
3,176,640	-		PFLU_RS14200	0.44	-0.0
3,176,723	+		PFLU_RS14200	0.52	+1.4
3,176,723	+		PFLU_RS14200	0.52	+0.3
3,176,724	-		PFLU_RS14200	0.52	-2.7
3,176,912	+		PFLU_RS14200	0.68	+0.8
3,176,912	+		PFLU_RS14200	0.68	-1.1
3,176,912	+		PFLU_RS14200	0.68	-1.2
3,176,912	+		PFLU_RS14200	0.68	+1.0
3,176,912	+		PFLU_RS14200	0.68	+1.2
3,176,912	+		PFLU_RS14200	0.68	-0.2
3,176,912	+		PFLU_RS14200	0.68	-0.7
3,176,913	-		PFLU_RS14200	0.68	+1.4
3,176,913	-		PFLU_RS14200	0.68	-0.4
3,176,913	-		PFLU_RS14200	0.68	+1.4
3,176,913	-		PFLU_RS14200	0.68	+0.1
3,176,913	-		PFLU_RS14200	0.68	-2.5
3,176,913	-		PFLU_RS14200	0.68	-2.4
3,176,913	-		PFLU_RS14200	0.68	+0.4
3,176,945	+		PFLU_RS14200	0.71	+0.5
3,176,945	+		PFLU_RS14200	0.71	+0.9
3,176,946	-		PFLU_RS14200	0.71	-0.1
3,176,946	-		PFLU_RS14200	0.71	-0.9
3,177,031	+		PFLU_RS14200	0.78	-0.3
3,177,040	+		PFLU_RS14200	0.79	+0.1
3,177,050	+		PFLU_RS14200	0.80	+0.7
3,177,050	+		PFLU_RS14200	0.80	+0.8
3,177,051	-		PFLU_RS14200	0.80	-0.9
3,177,051	-		PFLU_RS14200	0.80	+0.8