Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS10290

Experiment: Glucose (C) and L-Glutamine (N); with TAPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glucose (C) and L-Glutamine (N); with TAPS
2,268,838	+		PFLU_RS10285	0.48	+0.4
2,268,845	+		PFLU_RS10285	0.49	-1.5
2,268,846	-		PFLU_RS10285	0.49	+2.2
2,268,902	+		PFLU_RS10285	0.52	+0.2
2,268,902	+		PFLU_RS10285	0.52	-0.4
2,268,902	+		PFLU_RS10285	0.52	+0.1
2,268,902	+		PFLU_RS10285	0.52	-0.1
2,268,903	-		PFLU_RS10285	0.52	+0.4
2,268,903	-		PFLU_RS10285	0.52	+1.5
2,268,903	-		PFLU_RS10285	0.52	-0.4
2,268,903	-		PFLU_RS10285	0.52	-2.0
2,268,904	+		PFLU_RS10285	0.52	-1.8
2,268,904	+		PFLU_RS10285	0.52	-0.7
2,268,904	+		PFLU_RS10285	0.52	-0.0
2,268,904	+		PFLU_RS10285	0.52	-0.6
2,268,904	+		PFLU_RS10285	0.52	-0.9
2,268,905	-		PFLU_RS10285	0.52	+0.5
2,268,905	-		PFLU_RS10285	0.52	+1.2
2,268,905	-		PFLU_RS10285	0.52	+0.8
2,268,905	-		PFLU_RS10285	0.52	-2.3
2,268,905	-		PFLU_RS10285	0.52	-2.1
2,268,905	-		PFLU_RS10285	0.52	-0.7
2,268,980	-		PFLU_RS10285	0.56	+1.5
2,268,986	-		PFLU_RS10285	0.56	+0.7
2,268,986	-		PFLU_RS10285	0.56	-0.8
2,269,123	+		PFLU_RS10285	0.64	+2.1
2,269,124	-		PFLU_RS10285	0.64	-1.0
2,269,124	-		PFLU_RS10285	0.64	-1.1
2,269,124	-		PFLU_RS10285	0.64	+0.7
2,269,124	-		PFLU_RS10285	0.64	+0.1
2,269,387	+		PFLU_RS10285	0.78	+0.1
2,269,388	-		PFLU_RS10285	0.78	+0.6
2,269,388	-		PFLU_RS10285	0.78	-2.0
2,269,388	-		PFLU_RS10285	0.78	-0.5
2,269,437	+		PFLU_RS10285	0.81	-1.2
2,269,564	+		PFLU_RS10285	0.88	-2.0
2,269,564	+		PFLU_RS10285	0.88	+0.2
2,269,564	+		PFLU_RS10285	0.88	-1.5
2,269,564	+		PFLU_RS10285	0.88	-1.0
2,269,564	+		PFLU_RS10285	0.88	-0.6
2,269,564	+		PFLU_RS10285	0.88	-1.1
2,269,564	+		PFLU_RS10285	0.88	+0.8
2,269,564	+		PFLU_RS10285	0.88	-1.4
2,269,564	+		PFLU_RS10285	0.88	-1.6
2,269,564	+		PFLU_RS10285	0.88	+0.1
2,269,565	-		PFLU_RS10285	0.88	-0.5
2,269,565	-		PFLU_RS10285	0.88	-2.4
2,269,565	-		PFLU_RS10285	0.88	-1.2
2,269,704	+				-0.5
2,269,705	-				-0.1
2,269,841	-				+1.5
2,269,847	+				-0.0
2,269,847	+				-0.3
2,269,848	-				-0.9
2,269,848	-				-1.6
2,269,848	-				+0.9
2,269,848	-				+0.8
2,270,084	+		PFLU_RS10290	0.38	-0.2
2,270,084	+		PFLU_RS10290	0.38	-1.0
2,270,084	+		PFLU_RS10290	0.38	-2.7
2,270,084	+		PFLU_RS10290	0.38	-0.1
2,270,085	-		PFLU_RS10290	0.38	-0.5
2,270,374	+		PFLU_RS10290	0.75	-1.4
2,270,374	+		PFLU_RS10290	0.75	-1.8
2,270,374	+		PFLU_RS10290	0.75	-0.5
2,270,374	+		PFLU_RS10290	0.75	-0.8
2,270,375	-		PFLU_RS10290	0.75	+0.3
2,270,375	-		PFLU_RS10290	0.75	-0.9
2,270,375	-		PFLU_RS10290	0.75	-1.5
2,270,465	+		PFLU_RS10290	0.86	-1.0
2,270,465	+		PFLU_RS10290	0.86	-0.5
2,270,465	+		PFLU_RS10290	0.86	+0.1
2,270,465	+		PFLU_RS10290	0.86	+0.3
2,270,465	+		PFLU_RS10290	0.86	-0.8
2,270,466	-		PFLU_RS10290	0.86	-2.5
2,270,466	-		PFLU_RS10290	0.86	+0.2
2,270,571	+				+0.2
2,270,571	+				-1.4
2,270,571	+				+0.5
2,270,571	+				+1.8
2,270,571	+				-0.5
2,270,572	-				-1.5
2,270,572	-				-0.2
2,270,572	-				+0.4
2,270,572	-				-0.5
2,270,572	-				+0.8
2,270,572	-				-0.0
2,270,592	-				+0.3
2,270,592	-				-0.5
2,270,592	-				-0.2
2,270,595	+				+0.2
2,270,595	+				+0.2
2,270,595	+				+0.2
2,270,595	+				-1.7
2,270,595	+				+0.8
2,270,595	+				+2.2
2,270,596	-				+0.9
2,270,596	-				-0.4
2,270,596	-				-1.1
2,270,596	-				+1.8
2,270,596	-				-0.0
2,270,596	-				+0.8
2,270,596	-				+0.8
2,270,609	+				-1.4
2,270,609	+				-0.5
2,270,610	-				+1.1
2,270,653	-				+1.7
2,270,659	+				-0.8
2,270,659	+				-0.5
2,270,660	-				+0.5
2,270,660	-				+1.4
2,270,706	+				-0.2
2,270,761	+				-0.2
2,270,761	+				-1.4
2,270,762	-				+0.7
2,270,763	+				+0.8
2,270,763	+				-0.8
2,270,763	+				-0.8
2,270,763	+				+2.2
2,270,764	-				+0.4
2,270,764	-				+1.8
2,270,764	-				+2.6
2,270,764	-				+0.3
2,270,764	-				-0.5
2,270,790	+				+2.2
2,270,791	-				+2.8
2,270,791	-				+1.5
2,270,817	+				+0.2
2,270,817	+				-0.5
2,270,817	+				+0.8
2,270,817	+				+0.2
2,270,817	+				+1.1
2,270,818	-				-0.5
2,270,818	-				+1.2
2,270,818	-				-0.1
2,270,818	-				+0.5
2,270,820	-				+0.2
2,270,830	+				+2.2
2,270,830	+				-0.5
2,270,830	+				-0.5
2,270,831	-				+0.8
2,270,831	-				+0.2
2,270,831	-				-2.5
2,270,850	+				+0.5
2,270,859	+				+1.0
2,270,904	+		PFLU_RS10295	0.10	+0.2
2,270,908	+		PFLU_RS10295	0.11	-1.0
2,271,004	-		PFLU_RS10295	0.25	-1.9
2,271,013	-		PFLU_RS10295	0.26	-0.5
2,271,082	-		PFLU_RS10295	0.36	-0.8
2,271,180	+		PFLU_RS10295	0.50	+0.2
2,271,180	+		PFLU_RS10295	0.50	-2.8
2,271,181	-		PFLU_RS10295	0.50	-0.7
2,271,233	-		PFLU_RS10295	0.57	-1.1
2,271,237	+		PFLU_RS10295	0.58	-1.7
2,271,237	+		PFLU_RS10295	0.58	+0.8
2,271,238	-		PFLU_RS10295	0.58	-1.1
2,271,254	-		PFLU_RS10295	0.60	+0.8
2,271,288	+		PFLU_RS10295	0.65	+0.1
2,271,300	-		PFLU_RS10295	0.67	-1.7
2,271,300	-		PFLU_RS10295	0.67	+2.6
2,271,300	-		PFLU_RS10295	0.67	+1.2
2,271,300	-		PFLU_RS10295	0.67	-0.9
2,271,300	-		PFLU_RS10295	0.67	+0.2
2,271,333	+		PFLU_RS10295	0.71	+0.5
2,271,356	+		PFLU_RS10295	0.74	-1.0
2,271,356	+		PFLU_RS10295	0.74	-1.8
2,271,357	-		PFLU_RS10295	0.75	+0.8
2,271,357	-		PFLU_RS10295	0.75	-2.1
2,271,433	+		PFLU_RS10295	0.85	-0.0
2,271,434	-		PFLU_RS10295	0.86	+1.5
2,271,434	-		PFLU_RS10295	0.86	+0.5
2,271,508	-				+0.8