Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS24355

Experiment: Glucose (C) and Betaine (N); with TAPS; with chloride

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glucose (C) and Betaine (N); with TAPS; with chloride
5,453,096	-		PFLU_RS24350	0.69	-1.6
5,453,113	+		PFLU_RS24350	0.69	-0.2
5,453,113	+		PFLU_RS24350	0.69	-0.7
5,453,113	+		PFLU_RS24350	0.69	-0.0
5,453,113	+		PFLU_RS24350	0.69	-1.8
5,453,113	+		PFLU_RS24350	0.69	+0.1
5,453,114	-		PFLU_RS24350	0.69	-0.6
5,453,114	-		PFLU_RS24350	0.69	-0.1
5,453,114	-		PFLU_RS24350	0.69	+0.7
5,453,114	-		PFLU_RS24350	0.69	-2.3
5,453,114	-		PFLU_RS24350	0.69	-0.9
5,453,114	-		PFLU_RS24350	0.69	+0.8
5,453,114	-		PFLU_RS24350	0.69	-1.8
5,453,114	-		PFLU_RS24350	0.69	-0.8
5,453,132	-		PFLU_RS24350	0.70	-0.1
5,453,170	+		PFLU_RS24350	0.72	+0.3
5,453,170	+		PFLU_RS24350	0.72	-1.7
5,453,170	+		PFLU_RS24350	0.72	-0.8
5,453,170	+		PFLU_RS24350	0.72	+1.9
5,453,170	+		PFLU_RS24350	0.72	+1.5
5,453,170	+		PFLU_RS24350	0.72	-3.1
5,453,170	+		PFLU_RS24350	0.72	+0.5
5,453,171	-		PFLU_RS24350	0.72	+0.2
5,453,171	-		PFLU_RS24350	0.72	+0.4
5,453,171	-		PFLU_RS24350	0.72	-0.1
5,453,171	-		PFLU_RS24350	0.72	-0.9
5,453,171	-		PFLU_RS24350	0.72	-1.2
5,453,171	-		PFLU_RS24350	0.72	-1.5
5,453,171	-		PFLU_RS24350	0.72	-1.1
5,453,171	-		PFLU_RS24350	0.72	+2.0
5,453,200	+		PFLU_RS24350	0.73	+0.5
5,453,200	+		PFLU_RS24350	0.73	-0.0
5,453,200	+		PFLU_RS24350	0.73	+1.6
5,453,200	+		PFLU_RS24350	0.73	-0.8
5,453,201	-		PFLU_RS24350	0.73	-0.2
5,453,201	-		PFLU_RS24350	0.73	+3.2
5,453,201	-		PFLU_RS24350	0.73	+1.2
5,453,201	-		PFLU_RS24350	0.73	+0.2
5,453,201	-		PFLU_RS24350	0.73	+0.3
5,453,201	-		PFLU_RS24350	0.73	-1.2
5,453,227	-		PFLU_RS24350	0.74	+0.2
5,453,227	-		PFLU_RS24350	0.74	-0.1
5,453,305	+		PFLU_RS24350	0.77	+0.6
5,453,305	+		PFLU_RS24350	0.77	-2.4
5,453,305	+		PFLU_RS24350	0.77	-0.4
5,453,305	+		PFLU_RS24350	0.77	+0.6
5,453,305	+		PFLU_RS24350	0.77	-0.1
5,453,305	+		PFLU_RS24350	0.77	+2.2
5,453,305	+		PFLU_RS24350	0.77	+1.0
5,453,306	-		PFLU_RS24350	0.77	-2.6
5,453,306	-		PFLU_RS24350	0.77	-0.5
5,453,306	-		PFLU_RS24350	0.77	-0.1
5,453,306	-		PFLU_RS24350	0.77	+3.0
5,453,306	-		PFLU_RS24350	0.77	-0.5
5,453,306	-		PFLU_RS24350	0.77	+0.6
5,453,306	-		PFLU_RS24350	0.77	+0.3
5,453,306	-		PFLU_RS24350	0.77	-0.5
5,453,306	-		PFLU_RS24350	0.77	-1.5
5,453,306	-		PFLU_RS24350	0.77	-0.1
5,453,314	+		PFLU_RS24350	0.77	-0.2
5,453,314	+		PFLU_RS24350	0.77	+0.3
5,453,314	+		PFLU_RS24350	0.77	-0.8
5,453,314	+		PFLU_RS24350	0.77	-1.8
5,453,314	+		PFLU_RS24350	0.77	-1.1
5,453,314	+		PFLU_RS24350	0.77	-1.0
5,453,314	+		PFLU_RS24350	0.77	-0.5
5,453,314	+		PFLU_RS24350	0.77	+1.2
5,453,314	+		PFLU_RS24350	0.77	-1.3
5,453,314	+		PFLU_RS24350	0.77	-2.2
5,453,314	+		PFLU_RS24350	0.77	-0.2
5,453,314	+		PFLU_RS24350	0.77	-1.7
5,453,314	+		PFLU_RS24350	0.77	+0.6
5,453,314	+		PFLU_RS24350	0.77	+0.5
5,453,315	-		PFLU_RS24350	0.77	-0.6
5,453,315	-		PFLU_RS24350	0.77	+0.1
5,453,315	-		PFLU_RS24350	0.77	+0.2
5,453,315	-		PFLU_RS24350	0.77	+1.0
5,453,315	-		PFLU_RS24350	0.77	-0.1
5,453,315	-		PFLU_RS24350	0.77	+0.7
5,453,315	-		PFLU_RS24350	0.77	-0.2
5,453,315	-		PFLU_RS24350	0.77	-2.3
5,453,315	-		PFLU_RS24350	0.77	-0.1
5,453,315	-		PFLU_RS24350	0.77	-0.8
5,453,315	-		PFLU_RS24350	0.77	-2.6
5,453,461	+		PFLU_RS24350	0.83	+4.5
5,453,461	+		PFLU_RS24350	0.83	+0.3
5,453,461	+		PFLU_RS24350	0.83	-1.0
5,453,461	+		PFLU_RS24350	0.83	+2.2
5,453,461	+		PFLU_RS24350	0.83	+0.6
5,453,461	+		PFLU_RS24350	0.83	-0.1
5,453,461	+		PFLU_RS24350	0.83	-0.4
5,453,461	+		PFLU_RS24350	0.83	+0.4
5,453,461	+		PFLU_RS24350	0.83	-1.2
5,453,461	+		PFLU_RS24350	0.83	+0.4
5,453,461	+		PFLU_RS24350	0.83	-0.3
5,453,461	+		PFLU_RS24350	0.83	-0.5
5,453,461	+		PFLU_RS24350	0.83	+0.8
5,453,461	+		PFLU_RS24350	0.83	-1.5
5,453,461	+		PFLU_RS24350	0.83	+0.5
5,453,461	+		PFLU_RS24350	0.83	+0.8
5,453,462	-		PFLU_RS24350	0.83	-0.8
5,453,462	-		PFLU_RS24350	0.83	-0.8
5,453,462	-		PFLU_RS24350	0.83	-0.4
5,453,462	-		PFLU_RS24350	0.83	-2.0
5,453,462	-		PFLU_RS24350	0.83	-1.6
5,453,462	-		PFLU_RS24350	0.83	+1.9
5,453,462	-		PFLU_RS24350	0.83	+1.6
5,453,462	-		PFLU_RS24350	0.83	-0.6
5,453,462	-		PFLU_RS24350	0.83	+0.2
5,453,462	-		PFLU_RS24350	0.83	-1.9
5,453,462	-		PFLU_RS24350	0.83	-0.0
5,453,462	-		PFLU_RS24350	0.83	+0.2
5,453,462	-		PFLU_RS24350	0.83	-1.9
5,453,462	-		PFLU_RS24350	0.83	-1.1
5,453,462	-		PFLU_RS24350	0.83	-1.4
5,453,462	-		PFLU_RS24350	0.83	+0.3
5,453,462	-		PFLU_RS24350	0.83	-0.4
5,453,462	-		PFLU_RS24350	0.83	-1.8
5,453,462	-		PFLU_RS24350	0.83	-0.3
5,453,463	+		PFLU_RS24350	0.83	-0.4
5,453,463	+		PFLU_RS24350	0.83	+0.1
5,453,463	+		PFLU_RS24350	0.83	-2.6
5,453,463	+		PFLU_RS24350	0.83	-1.6
5,453,463	+		PFLU_RS24350	0.83	-1.4
5,453,463	+		PFLU_RS24350	0.83	+0.3
5,453,463	+		PFLU_RS24350	0.83	-0.2
5,453,463	+		PFLU_RS24350	0.83	-1.0
5,453,463	+		PFLU_RS24350	0.83	+0.3
5,453,463	+		PFLU_RS24350	0.83	+0.2
5,453,463	+		PFLU_RS24350	0.83	+0.4
5,453,463	+		PFLU_RS24350	0.83	+1.0
5,453,463	+		PFLU_RS24350	0.83	+1.4
5,453,463	+		PFLU_RS24350	0.83	+0.8
5,453,464	-		PFLU_RS24350	0.83	-1.7
5,453,464	-		PFLU_RS24350	0.83	-0.9
5,453,464	-		PFLU_RS24350	0.83	-0.5
5,453,464	-		PFLU_RS24350	0.83	-1.0
5,453,464	-		PFLU_RS24350	0.83	-1.8
5,453,464	-		PFLU_RS24350	0.83	-1.9
5,453,464	-		PFLU_RS24350	0.83	+1.6
5,453,464	-		PFLU_RS24350	0.83	-0.4
5,453,464	-		PFLU_RS24350	0.83	+1.8
5,453,464	-		PFLU_RS24350	0.83	+0.7
5,453,464	-		PFLU_RS24350	0.83	-0.1
5,453,464	-		PFLU_RS24350	0.83	-1.6
5,453,464	-		PFLU_RS24350	0.83	-0.7
5,453,464	-		PFLU_RS24350	0.83	-2.4
5,453,464	-		PFLU_RS24350	0.83	+0.6
5,453,464	-		PFLU_RS24350	0.83	+0.8
5,453,464	-		PFLU_RS24350	0.83	-0.2
5,453,482	+		PFLU_RS24350	0.84	-0.7
5,453,483	-		PFLU_RS24350	0.84	-0.8
5,453,483	-		PFLU_RS24350	0.84	-0.4
5,453,483	-		PFLU_RS24350	0.84	+0.5
5,453,483	-		PFLU_RS24350	0.84	-0.1
5,453,560	+		PFLU_RS24350	0.87	+0.6
5,453,561	-		PFLU_RS24350	0.87	-0.1
5,453,575	+		PFLU_RS24350	0.87	+1.0
5,453,576	-		PFLU_RS24350	0.87	-0.3
5,453,576	-		PFLU_RS24350	0.87	+0.4
5,453,631	+		PFLU_RS24350	0.89	-0.6
5,453,631	+		PFLU_RS24350	0.89	+1.2
5,453,631	+		PFLU_RS24350	0.89	+2.2
5,453,632	-		PFLU_RS24350	0.89	-0.1
5,453,632	-		PFLU_RS24350	0.89	+0.1
5,453,632	-		PFLU_RS24350	0.89	-0.2
5,453,655	+				-0.5
5,453,656	-				-1.7
5,453,713	+				+0.1
5,453,713	+				+0.5
5,453,713	+				+0.2
5,453,713	+				+0.9
5,453,713	+				-1.9
5,453,752	+				+0.4
5,453,752	+				+1.0
5,453,752	+				+1.3
5,453,753	-				+0.8
5,453,753	-				-0.5
5,453,773	+				+1.5
5,453,773	+				-0.3
5,453,773	+				-0.0
5,453,774	-				+1.1
5,453,774	-				-1.2
5,453,774	-				-1.5
5,453,800	+				-1.2
5,453,800	+				-0.8
5,453,801	-				-0.9
5,453,924	+				+1.5
5,453,925	-				-0.1
5,453,928	+				+0.6
5,453,928	+				-0.6
5,453,928	+				-2.3
5,453,928	+				+0.0
5,453,928	+				+0.9
5,453,928	+				+1.1
5,453,929	-				-0.4
5,453,929	-				+1.2
5,453,980	+				+1.2
5,453,980	+				+1.3
5,453,981	-				+2.6
5,453,981	-				+0.7
5,453,981	-				+0.6
5,453,981	-				-0.4
5,453,981	-				-0.1
5,454,192	+		PFLU_RS24355	0.25	-0.1
5,454,192	+		PFLU_RS24355	0.25	-1.8
5,454,192	+		PFLU_RS24355	0.25	-1.0
5,454,193	-		PFLU_RS24355	0.25	-0.4
5,454,193	-		PFLU_RS24355	0.25	-1.3
5,454,193	-		PFLU_RS24355	0.25	+1.4
5,454,222	+		PFLU_RS24355	0.30	+0.0
5,454,222	+		PFLU_RS24355	0.30	-0.9
5,454,222	+		PFLU_RS24355	0.30	-1.4
5,454,222	+		PFLU_RS24355	0.30	-0.0
5,454,223	-		PFLU_RS24355	0.30	-1.8
5,454,223	-		PFLU_RS24355	0.30	+3.2
5,454,223	-		PFLU_RS24355	0.30	-0.1
5,454,223	-		PFLU_RS24355	0.30	-0.5
5,454,223	-		PFLU_RS24355	0.30	-0.7
5,454,223	-		PFLU_RS24355	0.30	-1.1
5,454,223	-		PFLU_RS24355	0.30	+0.5
5,454,592	+				-0.5
5,454,592	+				+0.8
5,454,592	+				+0.4
5,454,592	+				+0.1
5,454,592	+				+0.2
5,454,592	+				+0.7
5,454,592	+				+0.2
5,454,592	+				-0.8
5,454,592	+				+0.2
5,454,592	+				+0.2
5,454,592	+				+0.5
5,454,593	-				+0.4
5,454,593	-				-0.9
5,454,593	-				+0.9
5,454,593	-				+2.8
5,454,604	+				+0.5
5,454,604	+				+0.4
5,454,604	+				-0.2
5,454,604	+				+0.1
5,454,604	+				+0.2
5,454,604	+				+0.6
5,454,605	-				+0.0
5,454,605	-				+2.6
5,454,621	+				+0.6
5,454,621	+				-0.2
5,454,621	+				+1.8
5,454,621	+				-0.1
5,454,621	+				-0.2
5,454,622	-				+2.0
5,454,622	-				+0.1
5,454,622	-				-1.2
5,454,704	-				-0.4
5,454,704	-				-1.4
5,454,717	+				+1.2
5,454,717	+				+0.6
5,454,717	+				+0.9
5,454,717	+				+2.0
5,454,717	+				-1.6
5,454,717	+				+0.1
5,454,717	+				-1.6
5,454,718	-				+1.2
5,454,718	-				+0.8
5,454,731	+				+0.4
5,454,731	+				-0.9
5,454,732	-				+0.7
5,454,732	-				+0.2
5,454,732	-				+0.0
5,454,732	-				+1.1
5,454,732	-				+0.2
5,454,732	-				+0.1
5,454,732	-				-1.8
5,454,784	+				+1.5
5,454,784	+				+0.2
5,454,784	+				-1.3
5,454,784	+				-0.4
5,454,785	-				-0.4
5,454,785	-				+0.6
5,454,790	+				+1.1
5,454,790	+				-0.3
5,454,790	+				-0.5
5,454,791	-				-1.8
5,454,791	-				+0.6
5,454,791	-				-0.4
5,454,791	-				-1.2
5,454,791	-				+1.9
5,454,856	+		PFLU_RS24360	0.15	+1.6
5,454,856	+		PFLU_RS24360	0.15	+2.2
5,454,856	+		PFLU_RS24360	0.15	-0.2
5,454,856	+		PFLU_RS24360	0.15	-0.1
5,454,856	+		PFLU_RS24360	0.15	+0.4
5,454,856	+		PFLU_RS24360	0.15	+0.4
5,454,857	-		PFLU_RS24360	0.15	+0.5
5,454,857	-		PFLU_RS24360	0.15	-0.9
5,454,857	-		PFLU_RS24360	0.15	+2.2
5,454,857	-		PFLU_RS24360	0.15	-0.1
5,454,857	-		PFLU_RS24360	0.15	-0.5
5,454,857	-		PFLU_RS24360	0.15	-1.4
5,454,857	-		PFLU_RS24360	0.15	+0.2
5,454,894	-		PFLU_RS24360	0.24	-1.5
5,455,120	+		PFLU_RS24360	0.81	+0.5
5,455,121	-		PFLU_RS24360	0.81	+0.1
5,455,121	-		PFLU_RS24360	0.81	-2.2
5,455,121	-		PFLU_RS24360	0.81	+1.0
5,455,121	-		PFLU_RS24360	0.81	-0.2
5,455,121	-		PFLU_RS24360	0.81	-0.5
5,455,121	-		PFLU_RS24360	0.81	-0.2
5,455,193	+				-1.5
5,455,193	+				+1.6
5,455,194	-				-0.8
5,455,194	-				+0.4
5,455,194	-				-0.4
5,455,195	+				-0.6
5,455,196	-				-0.6
5,455,215	+				+2.2
5,455,244	+				+0.6
5,455,244	+				-0.9
5,455,244	+				+0.5
5,455,245	-				-0.4
5,455,245	-				-0.8
5,455,245	-				-0.6
5,455,245	-				-0.1
5,455,245	-				+0.2
5,455,245	-				+1.6
5,455,252	+				-1.9
5,455,253	-				+0.8
5,455,274	+				+0.9
5,455,274	+				+0.7
5,455,274	+				-0.6
5,455,274	+				-1.4
5,455,274	+				-0.8
5,455,274	+				+0.4
5,455,275	-				+1.8
5,455,275	-				-0.6
5,455,275	-				-0.8
5,455,275	-				-0.2
5,455,275	-				-1.4
5,455,275	-				-0.9
5,455,275	-				+1.5
5,455,275	-				-0.3
5,455,275	-				-1.8
5,455,275	-				-1.1
5,455,275	-				-0.1
5,455,307	+				+0.1
5,455,307	+				+0.7
5,455,307	+				-0.8
5,455,307	+				-2.2
5,455,308	-				-0.9
5,455,308	-				-0.2
5,455,308	-				-0.8
5,455,335	+				+0.1
5,455,335	+				+0.6
5,455,335	+				-0.1
5,455,335	+				-0.8
5,455,335	+				+1.1
5,455,335	+				-2.9
5,455,335	+				+0.6
5,455,335	+				+0.8
5,455,335	+				+0.4
5,455,335	+				+0.4
5,455,335	+				+1.6
5,455,335	+				+1.6
5,455,335	+				-0.8
5,455,335	+				+2.6
5,455,335	+				-0.4
5,455,335	+				-0.1
5,455,336	-				+0.4
5,455,336	-				+0.9
5,455,336	-				+1.2
5,455,336	-				+0.1
5,455,336	-				+0.6
5,455,336	-				-0.6
5,455,336	-				+0.2
5,455,336	-				-1.1
5,455,336	-				-1.0
5,455,336	-				-0.9
5,455,336	-				+0.4
5,455,336	-				-0.4
5,455,336	-				-0.4
5,455,336	-				+0.4
5,455,336	-				+0.3
5,455,336	-				-0.2
5,455,425	+				-0.9
5,455,425	+				+1.7
5,455,425	+				-0.8
5,455,425	+				+0.6
5,455,425	+				-0.5
5,455,426	-				-0.0
5,455,426	-				-0.6
5,455,426	-				-0.1
5,455,426	-				+0.1
5,455,426	-				+0.4
5,455,426	-				+0.2
5,455,429	+				-0.1
5,455,429	+				+2.6
5,455,429	+				-0.0
5,455,429	+				-1.2
5,455,429	+				-0.3
5,455,429	+				-0.1
5,455,429	+				-0.9
5,455,429	+				+0.1
5,455,429	+				+0.4
5,455,429	+				+1.5
5,455,429	+				+1.6
5,455,430	-				-0.4
5,455,430	-				-0.5
5,455,430	-				-1.3
5,455,430	-				-0.5
5,455,430	-				-0.3
5,455,430	-				+0.0
5,455,430	-				-0.4
5,455,430	-				-0.6
5,455,430	-				-0.6
5,455,430	-				-0.4
5,455,430	-				-0.4
5,455,430	-				-0.7
5,455,430	-				-0.3
5,455,430	-				+0.4
5,455,430	-				+1.2