Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS28430

Experiment: Glucose (C) and Betaine (N); with TAPS; with chloride

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glucose (C) and Betaine (N); with TAPS; with chloride
6,324,901	+		PFLU_RS28420	0.34	-2.0
6,324,901	+		PFLU_RS28420	0.34	-0.6
6,324,901	+		PFLU_RS28420	0.34	-1.9
6,324,901	+		PFLU_RS28420	0.34	-2.9
6,324,902	-		PFLU_RS28420	0.34	-0.8
6,324,902	-		PFLU_RS28420	0.34	-3.3
6,324,902	-		PFLU_RS28420	0.34	-1.4
6,324,902	-		PFLU_RS28420	0.34	-0.2
6,324,902	-		PFLU_RS28420	0.34	-0.6
6,324,902	-		PFLU_RS28420	0.34	-1.2
6,324,902	-		PFLU_RS28420	0.34	-2.9
6,324,902	-		PFLU_RS28420	0.34	-0.4
6,324,914	+		PFLU_RS28420	0.35	+0.4
6,324,959	+		PFLU_RS28420	0.41	-1.8
6,324,959	+		PFLU_RS28420	0.41	+0.2
6,324,959	+		PFLU_RS28420	0.41	-0.3
6,324,960	-		PFLU_RS28420	0.41	-1.0
6,324,960	-		PFLU_RS28420	0.41	-2.8
6,324,960	-		PFLU_RS28420	0.41	-2.5
6,325,009	+		PFLU_RS28420	0.47	-2.9
6,325,009	+		PFLU_RS28420	0.47	-0.0
6,325,009	+		PFLU_RS28420	0.47	-2.5
6,325,009	+		PFLU_RS28420	0.47	-0.7
6,325,009	+		PFLU_RS28420	0.47	-1.4
6,325,009	+		PFLU_RS28420	0.47	-2.1
6,325,009	+		PFLU_RS28420	0.47	-2.5
6,325,009	+		PFLU_RS28420	0.47	-2.8
6,325,010	-		PFLU_RS28420	0.47	-2.0
6,325,010	-		PFLU_RS28420	0.47	-1.7
6,325,180	+		PFLU_RS28420	0.69	-1.5
6,325,181	-		PFLU_RS28420	0.69	-0.5
6,325,211	-		PFLU_RS28420	0.73	-0.8
6,325,211	-		PFLU_RS28420	0.73	-2.9
6,325,345	+		PFLU_RS28420	0.90	-1.5
6,325,345	+		PFLU_RS28420	0.90	-0.3
6,325,346	-		PFLU_RS28420	0.90	-1.9
6,325,378	+				-1.9
6,325,378	+				-0.7
6,325,378	+				-2.9
6,325,378	+				-1.4
6,325,379	-				+0.5
6,325,379	-				-1.5
6,325,379	-				-1.5
6,325,379	-				-1.1
6,325,379	-				-2.3
6,325,382	+				+0.3
6,325,382	+				-0.9
6,325,382	+				+0.7
6,325,382	+				-2.2
6,325,383	-				-0.5
6,325,383	-				-0.7
6,325,383	-				-0.1
6,325,383	-				-2.9
6,325,383	-				+1.5
6,325,717	+				+0.8
6,325,870	+		PFLU_RS28430	0.31	+1.1
6,325,870	+		PFLU_RS28430	0.31	-0.3
6,325,870	+		PFLU_RS28430	0.31	+0.2
6,325,870	+		PFLU_RS28430	0.31	+2.3
6,325,870	+		PFLU_RS28430	0.31	-2.1
6,325,870	+		PFLU_RS28430	0.31	+1.5
6,325,870	+		PFLU_RS28430	0.31	+0.2
6,325,870	+		PFLU_RS28430	0.31	+1.4
6,325,870	+		PFLU_RS28430	0.31	-0.5
6,325,870	+		PFLU_RS28430	0.31	+0.0
6,325,870	+		PFLU_RS28430	0.31	-1.0
6,325,870	+		PFLU_RS28430	0.31	-0.1
6,325,870	+		PFLU_RS28430	0.31	+0.8
6,325,870	+		PFLU_RS28430	0.31	-0.9
6,325,870	+		PFLU_RS28430	0.31	+0.4
6,325,870	+		PFLU_RS28430	0.31	+1.8
6,325,870	+		PFLU_RS28430	0.31	+0.1
6,325,870	+		PFLU_RS28430	0.31	-0.4
6,325,871	-		PFLU_RS28430	0.31	-1.0
6,325,871	-		PFLU_RS28430	0.31	+0.3
6,325,871	-		PFLU_RS28430	0.31	-1.3
6,325,871	-		PFLU_RS28430	0.31	-1.3
6,325,871	-		PFLU_RS28430	0.31	-0.1
6,325,871	-		PFLU_RS28430	0.31	+0.2
6,325,871	-		PFLU_RS28430	0.31	+0.3
6,325,871	-		PFLU_RS28430	0.31	-0.0
6,325,871	-		PFLU_RS28430	0.31	-0.3
6,325,871	-		PFLU_RS28430	0.31	+0.5
6,325,871	-		PFLU_RS28430	0.31	-1.6
6,325,871	-		PFLU_RS28430	0.31	+1.0
6,325,871	-		PFLU_RS28430	0.31	+0.5
6,325,871	-		PFLU_RS28430	0.31	-0.5
6,325,871	-		PFLU_RS28430	0.31	+0.7
6,325,871	-		PFLU_RS28430	0.31	+0.3
6,325,871	-		PFLU_RS28430	0.31	-0.0
6,325,871	-		PFLU_RS28430	0.31	+0.4
6,325,871	-		PFLU_RS28430	0.31	-2.0
6,325,871	-		PFLU_RS28430	0.31	-0.1
6,325,871	-		PFLU_RS28430	0.31	+1.1
6,325,871	-		PFLU_RS28430	0.31	-0.7
6,325,871	-		PFLU_RS28430	0.31	-1.2
6,325,871	-		PFLU_RS28430	0.31	+0.1
6,325,871	-		PFLU_RS28430	0.31	+0.7
6,325,871	-		PFLU_RS28430	0.31	+2.3
6,325,871	-		PFLU_RS28430	0.31	-0.5
6,325,871	-		PFLU_RS28430	0.31	-1.2
6,325,871	-		PFLU_RS28430	0.31	+1.7
6,325,943	+		PFLU_RS28430	0.51	-0.6
6,325,944	-		PFLU_RS28430	0.51	-0.0
6,325,944	-		PFLU_RS28430	0.51	-1.0
6,325,944	-		PFLU_RS28430	0.51	+0.4
6,325,944	-		PFLU_RS28430	0.51	+1.1
6,325,982	+		PFLU_RS28430	0.61	+1.2
6,325,982	+		PFLU_RS28430	0.61	+0.0
6,325,982	+		PFLU_RS28430	0.61	+1.0
6,325,982	+		PFLU_RS28430	0.61	-1.1
6,325,982	+		PFLU_RS28430	0.61	-0.2
6,325,982	+		PFLU_RS28430	0.61	+0.3
6,325,982	+		PFLU_RS28430	0.61	+0.1
6,325,982	+		PFLU_RS28430	0.61	-1.9
6,325,982	+		PFLU_RS28430	0.61	-0.1
6,325,982	+		PFLU_RS28430	0.61	+0.0
6,325,982	+		PFLU_RS28430	0.61	+1.6
6,325,982	+		PFLU_RS28430	0.61	-0.7
6,325,982	+		PFLU_RS28430	0.61	+0.7
6,325,982	+		PFLU_RS28430	0.61	-0.9
6,325,982	+		PFLU_RS28430	0.61	-0.3
6,325,982	+		PFLU_RS28430	0.61	+0.1
6,325,982	+		PFLU_RS28430	0.61	-0.3
6,325,982	+		PFLU_RS28430	0.61	+0.5
6,325,982	+		PFLU_RS28430	0.61	-0.9
6,325,982	+		PFLU_RS28430	0.61	+0.8
6,325,982	+		PFLU_RS28430	0.61	+0.1
6,325,982	+		PFLU_RS28430	0.61	-0.8
6,325,982	+		PFLU_RS28430	0.61	-0.6
6,325,982	+		PFLU_RS28430	0.61	-2.5
6,325,982	+		PFLU_RS28430	0.61	-1.0
6,325,982	+		PFLU_RS28430	0.61	-0.5
6,325,982	+		PFLU_RS28430	0.61	+2.1
6,325,982	+		PFLU_RS28430	0.61	+0.5
6,325,983	-		PFLU_RS28430	0.61	-1.2
6,325,983	-		PFLU_RS28430	0.61	-1.0
6,325,983	-		PFLU_RS28430	0.61	-1.9
6,325,983	-		PFLU_RS28430	0.61	-2.7
6,325,983	-		PFLU_RS28430	0.61	-0.7
6,325,983	-		PFLU_RS28430	0.61	-1.1
6,325,983	-		PFLU_RS28430	0.61	+1.1
6,325,983	-		PFLU_RS28430	0.61	-0.8
6,325,983	-		PFLU_RS28430	0.61	-1.8
6,325,983	-		PFLU_RS28430	0.61	-2.4
6,325,983	-		PFLU_RS28430	0.61	+1.1
6,325,983	-		PFLU_RS28430	0.61	+2.0
6,325,983	-		PFLU_RS28430	0.61	+0.4
6,325,983	-		PFLU_RS28430	0.61	+1.0
6,325,983	-		PFLU_RS28430	0.61	-2.2
6,325,983	-		PFLU_RS28430	0.61	-0.8
6,325,983	-		PFLU_RS28430	0.61	-0.5
6,325,983	-		PFLU_RS28430	0.61	-0.6
6,325,983	-		PFLU_RS28430	0.61	-0.2
6,325,983	-		PFLU_RS28430	0.61	-0.8
6,325,983	-		PFLU_RS28430	0.61	-3.6
6,325,983	-		PFLU_RS28430	0.61	-0.5
6,325,983	-		PFLU_RS28430	0.61	-1.1
6,325,983	-		PFLU_RS28430	0.61	-0.3
6,325,983	-		PFLU_RS28430	0.61	+1.9
6,325,983	-		PFLU_RS28430	0.61	-0.4
6,325,983	-		PFLU_RS28430	0.61	+0.2
6,325,983	-		PFLU_RS28430	0.61	-0.7
6,325,983	-		PFLU_RS28430	0.61	-0.0
6,325,983	-		PFLU_RS28430	0.61	-1.2
6,325,983	-		PFLU_RS28430	0.61	+0.3
6,325,983	-		PFLU_RS28430	0.61	-0.0
6,325,983	-		PFLU_RS28430	0.61	-0.7
6,325,986	+		PFLU_RS28430	0.62	+0.7
6,325,986	+		PFLU_RS28430	0.62	-0.2
6,325,986	+		PFLU_RS28430	0.62	+0.2
6,325,986	+		PFLU_RS28430	0.62	+1.0
6,325,986	+		PFLU_RS28430	0.62	+0.9
6,325,986	+		PFLU_RS28430	0.62	+1.3
6,325,986	+		PFLU_RS28430	0.62	-0.5
6,325,986	+		PFLU_RS28430	0.62	+1.3
6,325,986	+		PFLU_RS28430	0.62	-1.7
6,325,986	+		PFLU_RS28430	0.62	-0.3
6,325,986	+		PFLU_RS28430	0.62	-1.4
6,325,987	-		PFLU_RS28430	0.62	-0.0
6,325,987	-		PFLU_RS28430	0.62	+0.5
6,325,987	-		PFLU_RS28430	0.62	+0.5
6,325,987	-		PFLU_RS28430	0.62	+0.0
6,325,987	-		PFLU_RS28430	0.62	+0.7
6,325,987	-		PFLU_RS28430	0.62	+1.8
6,325,987	-		PFLU_RS28430	0.62	+0.3
6,325,987	-		PFLU_RS28430	0.62	-0.4
6,325,987	-		PFLU_RS28430	0.62	+1.4
6,325,987	-		PFLU_RS28430	0.62	-1.1
6,325,987	-		PFLU_RS28430	0.62	+0.8
6,325,996	+		PFLU_RS28430	0.65	+0.8
6,325,996	+		PFLU_RS28430	0.65	-0.2
6,325,996	+		PFLU_RS28430	0.65	+1.5
6,325,996	+		PFLU_RS28430	0.65	+0.5
6,325,997	-		PFLU_RS28430	0.65	-0.3
6,325,997	-		PFLU_RS28430	0.65	-0.0
6,325,997	-		PFLU_RS28430	0.65	+0.6
6,325,997	-		PFLU_RS28430	0.65	+0.3
6,325,997	-		PFLU_RS28430	0.65	+0.4
6,325,997	-		PFLU_RS28430	0.65	-0.9
6,325,997	-		PFLU_RS28430	0.65	-0.1
6,325,997	-		PFLU_RS28430	0.65	-1.2
6,325,997	-		PFLU_RS28430	0.65	-0.1
6,325,997	-		PFLU_RS28430	0.65	+1.0
6,325,997	-		PFLU_RS28430	0.65	-0.4
6,325,997	-		PFLU_RS28430	0.65	-0.2
6,325,997	-		PFLU_RS28430	0.65	+0.2
6,326,026	+		PFLU_RS28430	0.72	-1.1
6,326,112	+				+0.3
6,326,112	+				-0.6
6,326,112	+				+0.4
6,326,112	+				-0.4
6,326,112	+				+0.6
6,326,112	+				-1.4
6,326,113	-				+1.1
6,326,113	-				-1.6
6,326,113	-				+1.1
6,326,113	-				+0.3
6,326,120	+				-1.9
6,326,120	+				-0.1
6,326,120	+				+3.0
6,326,120	+				+1.1
6,326,121	-				-2.2
6,326,121	-				+0.7
6,326,121	-				+1.4
6,326,165	+				-0.5
6,326,165	+				-0.2
6,326,165	+				-2.4
6,326,165	+				-0.2
6,326,165	+				+0.9
6,326,165	+				+0.4
6,326,165	+				+0.7
6,326,165	+				-1.5
6,326,165	+				-1.6
6,326,165	+				-0.7
6,326,165	+				+0.6
6,326,165	+				-0.3
6,326,165	+				-0.1
6,326,165	+				+0.1
6,326,165	+				-2.0
6,326,165	+				-2.2
6,326,165	+				-0.2
6,326,165	+				-0.3
6,326,165	+				+0.2
6,326,165	+				+1.1
6,326,165	+				+0.3
6,326,165	+				+1.4
6,326,165	+				-0.5
6,326,165	+				-0.7
6,326,165	+				-0.3
6,326,165	+				-0.9
6,326,165	+				+0.9
6,326,165	+				-0.4
6,326,165	+				-0.6
6,326,165	+				+0.1
6,326,166	-				-0.2
6,326,166	-				+0.5
6,326,166	-				-0.5
6,326,166	-				+1.9
6,326,166	-				+2.2
6,326,166	-				-0.5
6,326,166	-				+0.9
6,326,166	-				+0.4
6,326,166	-				+0.1
6,326,166	-				+0.5
6,326,166	-				+0.3
6,326,166	-				+0.0
6,326,167	+				+0.7
6,326,168	-				+1.4
6,326,168	-				+2.1
6,326,168	-				-1.8
6,326,168	-				+0.4
6,326,168	-				-0.7
6,326,203	+				+1.0
6,326,203	+				+0.2
6,326,203	+				+0.2
6,326,203	+				+0.3
6,326,203	+				+1.3
6,326,203	+				-0.8
6,326,203	+				+1.1
6,326,203	+				+0.8
6,326,203	+				-1.3
6,326,203	+				+0.7
6,326,204	-				-0.6
6,326,204	-				-1.1
6,326,204	-				+1.0
6,326,204	-				-0.5
6,326,204	-				+2.1
6,326,204	-				-0.6
6,326,204	-				+0.5
6,326,204	-				-0.2
6,326,204	-				+0.1
6,326,242	+				-0.2
6,326,242	+				+0.4
6,326,242	+				+0.6
6,326,243	-				-0.1
6,326,274	+				-1.0
6,326,274	+				-0.5
6,326,274	+				+0.3
6,326,275	-				-0.4
6,326,579	+		PFLU_RS28435	0.52	-2.4
6,326,580	-		PFLU_RS28435	0.52	+0.3
6,326,657	+		PFLU_RS28435	0.63	-2.3
6,326,657	+		PFLU_RS28435	0.63	+1.3
6,326,657	+		PFLU_RS28435	0.63	+1.3
6,326,657	+		PFLU_RS28435	0.63	-0.9
6,326,658	-		PFLU_RS28435	0.63	+1.0
6,326,658	-		PFLU_RS28435	0.63	+1.7
6,326,658	-		PFLU_RS28435	0.63	-0.1
6,326,658	-		PFLU_RS28435	0.63	+1.4
6,326,658	-		PFLU_RS28435	0.63	+1.0
6,326,658	-		PFLU_RS28435	0.63	-0.2
6,326,658	-		PFLU_RS28435	0.63	+0.6
6,326,658	-		PFLU_RS28435	0.63	+1.7
6,326,742	+		PFLU_RS28435	0.74	+0.4
6,326,762	+		PFLU_RS28435	0.77	-1.3
6,326,762	+		PFLU_RS28435	0.77	-0.1
6,326,762	+		PFLU_RS28435	0.77	-2.8
6,326,762	+		PFLU_RS28435	0.77	+0.1
6,326,762	+		PFLU_RS28435	0.77	-1.1
6,326,762	+		PFLU_RS28435	0.77	-0.8
6,326,762	+		PFLU_RS28435	0.77	-0.9
6,326,762	+		PFLU_RS28435	0.77	-0.2
6,326,762	+		PFLU_RS28435	0.77	+0.4
6,326,762	+		PFLU_RS28435	0.77	-0.2
6,326,763	-		PFLU_RS28435	0.77	+2.9
6,326,763	-		PFLU_RS28435	0.77	+1.6
6,326,763	-		PFLU_RS28435	0.77	+0.1
6,326,763	-		PFLU_RS28435	0.77	+0.5
6,326,763	-		PFLU_RS28435	0.77	+0.4
6,326,763	-		PFLU_RS28435	0.77	-0.6
6,326,763	-		PFLU_RS28435	0.77	+0.3
6,326,763	-		PFLU_RS28435	0.77	+0.2
6,326,763	-		PFLU_RS28435	0.77	+2.3
6,326,763	-		PFLU_RS28435	0.77	+1.4
6,326,819	+		PFLU_RS28435	0.85	+0.2
6,326,819	+		PFLU_RS28435	0.85	-0.3
6,326,819	+		PFLU_RS28435	0.85	+2.0
6,326,819	+		PFLU_RS28435	0.85	-2.9
6,326,819	+		PFLU_RS28435	0.85	-0.7
6,326,820	-		PFLU_RS28435	0.85	+0.7
6,326,820	-		PFLU_RS28435	0.85	+1.6
6,326,820	-		PFLU_RS28435	0.85	+0.2
6,326,820	-		PFLU_RS28435	0.85	-0.8
6,326,820	-		PFLU_RS28435	0.85	-0.0
6,326,820	-		PFLU_RS28435	0.85	-1.4
6,326,820	-		PFLU_RS28435	0.85	-1.5
6,326,820	-		PFLU_RS28435	0.85	+0.1
6,326,820	-		PFLU_RS28435	0.85	+0.1
6,326,820	-		PFLU_RS28435	0.85	-1.8
6,326,879	+				+0.6
6,326,880	-				+0.8
6,326,896	+				-0.7
6,326,994	-				-0.5
6,326,994	-				-0.5
6,326,994	-				+0.0
6,326,994	-				-0.4
6,326,994	-				+0.9
6,326,994	-				-0.1
6,326,994	-				+0.8
6,326,994	-				-1.2
6,327,037	+				+1.4
6,327,057	-				+1.5
6,327,057	-				+2.7