Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS19020

Experiment: Glucose (C) and Betaine (N); with TAPS; with chloride

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glucose (C) and Betaine (N); with TAPS; with chloride
4,300,798	+		PFLU_RS19010	0.74	-0.5
4,300,798	+		PFLU_RS19010	0.74	+0.6
4,300,798	+		PFLU_RS19010	0.74	+1.2
4,300,799	-		PFLU_RS19010	0.74	+1.4
4,300,799	-		PFLU_RS19010	0.74	-0.2
4,300,799	-		PFLU_RS19010	0.74	+2.8
4,300,799	-		PFLU_RS19010	0.74	-0.7
4,300,799	-		PFLU_RS19010	0.74	-0.8
4,300,799	-		PFLU_RS19010	0.74	+0.3
4,300,965	+				-0.5
4,300,965	+				+2.1
4,300,965	+				-0.4
4,300,965	+				-0.5
4,300,965	+				-0.5
4,300,965	+				+0.2
4,300,965	+				+0.1
4,300,965	+				-0.5
4,300,965	+				-1.0
4,300,965	+				-0.8
4,300,966	-				+0.3
4,300,966	-				-0.0
4,300,966	-				-0.5
4,301,013	+		PFLU_RS19015	0.12	-0.9
4,301,013	+		PFLU_RS19015	0.12	+0.6
4,301,013	+		PFLU_RS19015	0.12	+0.6
4,301,014	-		PFLU_RS19015	0.12	+1.4
4,301,014	-		PFLU_RS19015	0.12	+0.9
4,301,014	-		PFLU_RS19015	0.12	-0.5
4,301,014	-		PFLU_RS19015	0.12	+0.7
4,301,328	+		PFLU_RS19015	0.54	-2.5
4,301,328	+		PFLU_RS19015	0.54	+0.7
4,301,328	+		PFLU_RS19015	0.54	-3.5
4,301,328	+		PFLU_RS19015	0.54	-1.7
4,301,328	+		PFLU_RS19015	0.54	-0.1
4,301,329	-		PFLU_RS19015	0.55	+0.2
4,301,329	-		PFLU_RS19015	0.55	-0.7
4,301,444	+		PFLU_RS19015	0.70	-1.2
4,301,478	+		PFLU_RS19015	0.75	-0.3
4,301,478	+		PFLU_RS19015	0.75	-0.5
4,301,479	-		PFLU_RS19015	0.75	-2.0
4,301,511	+		PFLU_RS19015	0.79	+0.2
4,301,511	+		PFLU_RS19015	0.79	+0.1
4,301,511	+		PFLU_RS19015	0.79	+0.3
4,301,511	+		PFLU_RS19015	0.79	+1.4
4,301,511	+		PFLU_RS19015	0.79	+0.1
4,301,511	+		PFLU_RS19015	0.79	-0.5
4,301,512	-		PFLU_RS19015	0.79	-2.0
4,301,512	-		PFLU_RS19015	0.79	-1.0
4,301,512	-		PFLU_RS19015	0.79	-0.5
4,301,587	-		PFLU_RS19015	0.90	+0.1
4,301,605	-				-0.5
4,301,605	-				-2.5
4,301,605	-				-0.1
4,301,610	+				-2.7
4,301,610	+				+1.2
4,301,610	+				-1.7
4,301,610	+				-0.0
4,301,610	+				-1.2
4,301,610	+				+0.9
4,301,610	+				-2.7
4,301,610	+				-1.5
4,301,610	+				+0.2
4,301,610	+				-2.9
4,301,610	+				-0.3
4,301,610	+				-2.5
4,301,610	+				-0.7
4,301,610	+				+1.3
4,301,611	-				+0.6
4,301,611	-				+0.1
4,301,611	-				+2.2
4,301,611	-				+0.3
4,301,611	-				+0.2
4,301,611	-				-1.5
4,301,611	-				+0.8
4,301,611	-				+1.2
4,301,611	-				-0.8
4,301,611	-				+1.6
4,301,661	+				+1.8
4,301,662	-				-0.2
4,301,678	+				+0.2
4,301,694	+				-0.3
4,301,694	+				-0.6
4,301,694	+				-0.9
4,301,694	+				-0.8
4,301,694	+				-1.9
4,301,694	+				-1.4
4,301,694	+				+1.7
4,301,694	+				+0.1
4,301,694	+				+2.5
4,301,694	+				-0.0
4,301,694	+				+0.8
4,301,695	-				-0.7
4,301,695	-				-0.0
4,301,695	-				-1.6
4,301,695	-				-0.5
4,301,695	-				+0.2
4,301,695	-				+0.6
4,301,695	-				+1.8
4,301,699	-				-1.3
4,301,699	-				-1.9
4,301,727	+				-1.9
4,301,728	-				-0.9
4,301,728	-				+0.5
4,301,742	+				-1.4
4,301,742	+				+1.1
4,301,742	+				-0.6
4,301,742	+				+0.6
4,301,742	+				-1.9
4,301,742	+				-0.3
4,301,743	-				+0.1
4,301,743	-				+0.1
4,301,743	-				+0.6
4,301,743	-				+0.2
4,301,743	-				-1.5
4,301,839	+		PFLU_RS19020	0.19	-2.3
4,301,839	+		PFLU_RS19020	0.19	-0.7
4,301,840	-		PFLU_RS19020	0.20	-0.1
4,301,860	+		PFLU_RS19020	0.22	-0.1
4,301,861	-		PFLU_RS19020	0.22	+0.9
4,301,865	+		PFLU_RS19020	0.22	+0.6
4,301,866	-		PFLU_RS19020	0.22	-0.1
4,301,874	+		PFLU_RS19020	0.23	-0.2
4,301,874	+		PFLU_RS19020	0.23	-0.5
4,301,874	+		PFLU_RS19020	0.23	+1.0
4,301,874	+		PFLU_RS19020	0.23	+0.7
4,301,874	+		PFLU_RS19020	0.23	+2.0
4,301,874	+		PFLU_RS19020	0.23	+0.8
4,301,874	+		PFLU_RS19020	0.23	+1.8
4,301,874	+		PFLU_RS19020	0.23	+1.0
4,301,874	+		PFLU_RS19020	0.23	-1.4
4,301,874	+		PFLU_RS19020	0.23	-0.7
4,301,874	+		PFLU_RS19020	0.23	+2.2
4,301,874	+		PFLU_RS19020	0.23	-0.9
4,301,875	-		PFLU_RS19020	0.23	+0.2
4,301,875	-		PFLU_RS19020	0.23	-1.7
4,301,875	-		PFLU_RS19020	0.23	+2.4
4,301,875	-		PFLU_RS19020	0.23	+0.2
4,301,875	-		PFLU_RS19020	0.23	-2.4
4,302,124	+		PFLU_RS19020	0.51	-1.5
4,302,124	+		PFLU_RS19020	0.51	-0.2
4,302,124	+		PFLU_RS19020	0.51	-0.9
4,302,124	+		PFLU_RS19020	0.51	+0.7
4,302,124	+		PFLU_RS19020	0.51	-2.6
4,302,124	+		PFLU_RS19020	0.51	+0.5
4,302,125	-		PFLU_RS19020	0.51	+0.8
4,302,125	-		PFLU_RS19020	0.51	+0.6
4,302,125	-		PFLU_RS19020	0.51	+1.4
4,302,125	-		PFLU_RS19020	0.51	-1.5
4,302,150	+		PFLU_RS19020	0.53	+1.5
4,302,150	+		PFLU_RS19020	0.53	+0.9
4,302,150	+		PFLU_RS19020	0.53	-0.5
4,302,150	+		PFLU_RS19020	0.53	-0.3
4,302,150	+		PFLU_RS19020	0.53	+0.8
4,302,150	+		PFLU_RS19020	0.53	+1.3
4,302,151	-		PFLU_RS19020	0.53	-1.1
4,302,151	-		PFLU_RS19020	0.53	+1.8
4,302,151	-		PFLU_RS19020	0.53	+0.1
4,302,151	-		PFLU_RS19020	0.53	-0.5
4,302,151	-		PFLU_RS19020	0.53	+1.2
4,302,151	-		PFLU_RS19020	0.53	-1.0
4,302,151	-		PFLU_RS19020	0.53	-1.6
4,302,151	-		PFLU_RS19020	0.53	-0.7
4,302,186	+		PFLU_RS19020	0.57	-0.9
4,302,186	+		PFLU_RS19020	0.57	-1.1
4,302,187	-		PFLU_RS19020	0.57	+1.3
4,302,187	-		PFLU_RS19020	0.57	+1.6
4,302,187	-		PFLU_RS19020	0.57	+1.8
4,302,187	-		PFLU_RS19020	0.57	+1.0
4,302,187	-		PFLU_RS19020	0.57	+2.8
4,302,205	+		PFLU_RS19020	0.59	-0.8
4,302,228	+		PFLU_RS19020	0.62	-0.4
4,302,229	-		PFLU_RS19020	0.62	-0.4
4,302,358	+		PFLU_RS19020	0.76	-1.2
4,302,358	+		PFLU_RS19020	0.76	-0.3
4,302,358	+		PFLU_RS19020	0.76	-2.0
4,302,359	-		PFLU_RS19020	0.76	+0.3
4,302,359	-		PFLU_RS19020	0.76	-0.5
4,302,361	-		PFLU_RS19020	0.76	-2.5
4,302,421	-		PFLU_RS19020	0.83	-2.2
4,302,421	-		PFLU_RS19020	0.83	+0.4
4,302,596	+				-0.2
4,302,596	+				-2.0
4,302,597	-				+1.0
4,302,597	-				-0.8
4,302,597	-				-0.2
4,302,597	-				-0.2
4,302,637	+				-0.1
4,302,638	-				+0.8
4,302,638	-				-1.2
4,302,638	-				+0.4
4,302,638	-				+0.2
4,302,702	+				+0.8
4,302,703	-				-0.8
4,302,703	-				-0.5
4,302,736	-				+0.2
4,302,736	-				+0.5
4,302,736	-				-3.5
4,302,758	+				-2.5
4,302,758	+				-1.2
4,302,758	+				-1.0
4,302,758	+				+1.1
4,302,759	-				-0.2
4,302,759	-				-0.3
4,302,902	+		PFLU_RS19025	0.12	-1.2
4,302,903	-		PFLU_RS19025	0.12	+0.9
4,302,986	+		PFLU_RS19025	0.15	-1.2
4,303,001	+		PFLU_RS19025	0.16	-1.2
4,303,001	+		PFLU_RS19025	0.16	-0.4
4,303,001	+		PFLU_RS19025	0.16	+2.6
4,303,001	+		PFLU_RS19025	0.16	-2.0
4,303,001	+		PFLU_RS19025	0.16	-0.5
4,303,001	+		PFLU_RS19025	0.16	+0.3
4,303,002	-		PFLU_RS19025	0.16	-1.7
4,303,002	-		PFLU_RS19025	0.16	+1.2
4,303,067	+		PFLU_RS19025	0.19	-1.7
4,303,099	-		PFLU_RS19025	0.20	-0.7
4,303,211	+		PFLU_RS19025	0.25	-0.0
4,303,212	-		PFLU_RS19025	0.25	+0.2
4,303,212	-		PFLU_RS19025	0.25	+0.4
4,303,212	-		PFLU_RS19025	0.25	+0.8
4,303,213	+		PFLU_RS19025	0.25	-0.4
4,303,214	-		PFLU_RS19025	0.25	+0.2
4,303,214	-		PFLU_RS19025	0.25	-2.8
4,303,304	+		PFLU_RS19025	0.29	+1.0
4,303,304	+		PFLU_RS19025	0.29	-0.8
4,303,304	+		PFLU_RS19025	0.29	-0.0
4,303,304	+		PFLU_RS19025	0.29	+0.0
4,303,304	+		PFLU_RS19025	0.29	+0.5
4,303,305	-		PFLU_RS19025	0.29	-0.2
4,303,305	-		PFLU_RS19025	0.29	+0.8
4,303,305	-		PFLU_RS19025	0.29	+1.2
4,303,305	-		PFLU_RS19025	0.29	-0.9
4,303,340	+		PFLU_RS19025	0.30	+1.0
4,303,340	+		PFLU_RS19025	0.30	-1.7
4,303,340	+		PFLU_RS19025	0.30	+0.6
4,303,340	+		PFLU_RS19025	0.30	+0.3
4,303,340	+		PFLU_RS19025	0.30	-2.0
4,303,340	+		PFLU_RS19025	0.30	+1.2
4,303,340	+		PFLU_RS19025	0.30	-2.4
4,303,341	-		PFLU_RS19025	0.30	+1.2
4,303,341	-		PFLU_RS19025	0.30	+0.0
4,303,341	-		PFLU_RS19025	0.30	+0.6
4,303,341	-		PFLU_RS19025	0.30	-0.4
4,303,341	-		PFLU_RS19025	0.30	-1.5
4,303,341	-		PFLU_RS19025	0.30	+0.2
4,303,341	-		PFLU_RS19025	0.30	-0.3
4,303,478	+		PFLU_RS19025	0.36	-1.0
4,303,478	+		PFLU_RS19025	0.36	-0.9
4,303,478	+		PFLU_RS19025	0.36	+0.4
4,303,565	+		PFLU_RS19025	0.40	+0.1
4,303,566	-		PFLU_RS19025	0.40	+0.8