Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS14655

Experiment: Glucose (C) and Betaine (N); with TAPS; with chloride

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glucose (C) and Betaine (N); with TAPS; with chloride
3,274,096	+		PFLU_RS14650	0.15	+2.3
3,274,096	+		PFLU_RS14650	0.15	-2.6
3,274,096	+		PFLU_RS14650	0.15	+0.9
3,274,096	+		PFLU_RS14650	0.15	+0.8
3,274,096	+		PFLU_RS14650	0.15	+0.0
3,274,096	+		PFLU_RS14650	0.15	+1.3
3,274,096	+		PFLU_RS14650	0.15	+0.3
3,274,096	+		PFLU_RS14650	0.15	-1.2
3,274,096	+		PFLU_RS14650	0.15	+0.7
3,274,096	+		PFLU_RS14650	0.15	+1.1
3,274,096	+		PFLU_RS14650	0.15	-1.2
3,274,096	+		PFLU_RS14650	0.15	-0.3
3,274,096	+		PFLU_RS14650	0.15	-1.6
3,274,096	+		PFLU_RS14650	0.15	-0.7
3,274,096	+		PFLU_RS14650	0.15	+1.0
3,274,096	+		PFLU_RS14650	0.15	+0.1
3,274,097	-		PFLU_RS14650	0.15	+2.2
3,274,097	-		PFLU_RS14650	0.15	-0.1
3,274,097	-		PFLU_RS14650	0.15	+0.1
3,274,097	-		PFLU_RS14650	0.15	-1.4
3,274,097	-		PFLU_RS14650	0.15	+1.3
3,274,097	-		PFLU_RS14650	0.15	+1.1
3,274,097	-		PFLU_RS14650	0.15	-0.1
3,274,097	-		PFLU_RS14650	0.15	+2.0
3,274,097	-		PFLU_RS14650	0.15	+0.5
3,274,097	-		PFLU_RS14650	0.15	-1.8
3,274,097	-		PFLU_RS14650	0.15	+0.3
3,274,097	-		PFLU_RS14650	0.15	-0.7
3,274,097	-		PFLU_RS14650	0.15	-2.4
3,274,097	-		PFLU_RS14650	0.15	-1.0
3,274,097	-		PFLU_RS14650	0.15	-2.6
3,274,097	-		PFLU_RS14650	0.15	+0.1
3,274,097	-		PFLU_RS14650	0.15	-1.0
3,274,097	-		PFLU_RS14650	0.15	-0.9
3,274,097	-		PFLU_RS14650	0.15	-1.6
3,274,097	-		PFLU_RS14650	0.15	+1.1
3,274,097	-		PFLU_RS14650	0.15	-0.2
3,274,097	-		PFLU_RS14650	0.15	+0.8
3,274,097	-		PFLU_RS14650	0.15	-0.1
3,274,097	-		PFLU_RS14650	0.15	-0.7
3,274,097	-		PFLU_RS14650	0.15	-0.5
3,274,321	+		PFLU_RS14650	0.35	+0.3
3,274,321	+		PFLU_RS14650	0.35	-1.2
3,274,321	+		PFLU_RS14650	0.35	-2.4
3,274,321	+		PFLU_RS14650	0.35	-0.2
3,274,321	+		PFLU_RS14650	0.35	+3.7
3,274,321	+		PFLU_RS14650	0.35	-1.4
3,274,321	+		PFLU_RS14650	0.35	+1.9
3,274,321	+		PFLU_RS14650	0.35	+0.2
3,274,321	+		PFLU_RS14650	0.35	+0.7
3,274,321	+		PFLU_RS14650	0.35	+0.5
3,274,321	+		PFLU_RS14650	0.35	-1.0
3,274,321	+		PFLU_RS14650	0.35	-1.7
3,274,322	-		PFLU_RS14650	0.35	-1.5
3,274,322	-		PFLU_RS14650	0.35	-1.0
3,274,322	-		PFLU_RS14650	0.35	-1.5
3,274,322	-		PFLU_RS14650	0.35	+0.0
3,274,322	-		PFLU_RS14650	0.35	+0.9
3,274,355	+		PFLU_RS14650	0.38	-1.0
3,274,355	+		PFLU_RS14650	0.38	-2.4
3,274,356	-		PFLU_RS14650	0.38	-0.7
3,274,500	+		PFLU_RS14650	0.51	+1.0
3,274,500	+		PFLU_RS14650	0.51	+0.2
3,274,500	+		PFLU_RS14650	0.51	-2.5
3,274,500	+		PFLU_RS14650	0.51	-1.7
3,274,500	+		PFLU_RS14650	0.51	+0.2
3,274,500	+		PFLU_RS14650	0.51	+1.3
3,274,500	+		PFLU_RS14650	0.51	-2.2
3,274,500	+		PFLU_RS14650	0.51	+2.3
3,274,501	-		PFLU_RS14650	0.51	+0.1
3,274,501	-		PFLU_RS14650	0.51	-0.2
3,274,501	-		PFLU_RS14650	0.51	-2.6
3,274,501	-		PFLU_RS14650	0.51	+2.3
3,274,501	-		PFLU_RS14650	0.51	-0.7
3,274,501	-		PFLU_RS14650	0.51	-1.7
3,274,501	-		PFLU_RS14650	0.51	-1.7
3,274,501	-		PFLU_RS14650	0.51	+0.5
3,274,501	-		PFLU_RS14650	0.51	-2.7
3,274,501	-		PFLU_RS14650	0.51	+0.5
3,274,501	-		PFLU_RS14650	0.51	+0.3
3,274,501	-		PFLU_RS14650	0.51	+2.7
3,274,501	-		PFLU_RS14650	0.51	+0.9
3,274,642	+		PFLU_RS14650	0.64	-0.7
3,274,642	+		PFLU_RS14650	0.64	+1.3
3,274,643	-		PFLU_RS14650	0.64	+2.2
3,274,720	+		PFLU_RS14650	0.71	-2.0
3,274,721	-		PFLU_RS14650	0.71	-1.4
3,274,734	+		PFLU_RS14650	0.72	-1.0
3,274,799	-		PFLU_RS14650	0.78	+0.8
3,274,799	-		PFLU_RS14650	0.78	+1.5
3,274,872	+		PFLU_RS14650	0.84	-1.1
3,275,045	+				-0.2
3,275,045	+				+0.1
3,275,045	+				-0.2
3,275,045	+				+0.6
3,275,045	+				-1.1
3,275,045	+				-1.0
3,275,046	-				-2.2
3,275,046	-				-2.2
3,275,046	-				-1.7
3,275,046	-				-2.0
3,275,140	+				-1.0
3,275,140	+				-1.7
3,275,379	+		PFLU_RS14655	0.28	+0.0
3,275,379	+		PFLU_RS14655	0.28	+0.2
3,275,379	+		PFLU_RS14655	0.28	+0.6
3,275,556	+		PFLU_RS14655	0.43	+2.0
3,275,556	+		PFLU_RS14655	0.43	+0.3
3,275,557	-		PFLU_RS14655	0.43	-2.2
3,275,557	-		PFLU_RS14655	0.43	-1.8
3,275,557	-		PFLU_RS14655	0.43	+0.8
3,275,557	-		PFLU_RS14655	0.43	-2.5
3,275,557	-		PFLU_RS14655	0.43	-0.9
3,275,557	-		PFLU_RS14655	0.43	-0.2
3,275,557	-		PFLU_RS14655	0.43	-3.5
3,275,557	-		PFLU_RS14655	0.43	+0.4
3,275,557	-		PFLU_RS14655	0.43	-2.2
3,275,672	+		PFLU_RS14655	0.53	+1.9
3,275,707	-		PFLU_RS14655	0.56	-1.0
3,275,707	-		PFLU_RS14655	0.56	-0.2
3,275,707	-		PFLU_RS14655	0.56	-0.8
3,275,845	+		PFLU_RS14655	0.68	-0.0
3,275,845	+		PFLU_RS14655	0.68	+1.3
3,275,845	+		PFLU_RS14655	0.68	-1.5
3,275,845	+		PFLU_RS14655	0.68	+0.2
3,275,845	+		PFLU_RS14655	0.68	-1.7
3,275,845	+		PFLU_RS14655	0.68	+0.8
3,275,845	+		PFLU_RS14655	0.68	-0.0
3,275,846	-		PFLU_RS14655	0.68	+0.8
3,275,846	-		PFLU_RS14655	0.68	-0.4
3,275,904	+		PFLU_RS14655	0.73	+2.8
3,275,904	+		PFLU_RS14655	0.73	-1.0
3,275,904	+		PFLU_RS14655	0.73	+0.3
3,275,904	+		PFLU_RS14655	0.73	+1.3
3,275,904	+		PFLU_RS14655	0.73	+0.9
3,275,904	+		PFLU_RS14655	0.73	-0.9
3,275,904	+		PFLU_RS14655	0.73	+1.3
3,275,904	+		PFLU_RS14655	0.73	+0.7
3,275,905	-		PFLU_RS14655	0.73	-0.4
3,275,905	-		PFLU_RS14655	0.73	-0.5
3,275,905	-		PFLU_RS14655	0.73	+0.3
3,275,905	-		PFLU_RS14655	0.73	+1.2
3,275,905	-		PFLU_RS14655	0.73	-1.4
3,276,293	+				-0.1
3,276,293	+				-1.0
3,276,387	-		PFLU_RS14660	0.16	+0.3
3,276,467	+		PFLU_RS14660	0.25	-0.1
3,276,467	+		PFLU_RS14660	0.25	-0.2
3,276,468	-		PFLU_RS14660	0.25	+0.3
3,276,488	+		PFLU_RS14660	0.27	+0.3
3,276,489	-		PFLU_RS14660	0.27	+1.5
3,276,489	-		PFLU_RS14660	0.27	-1.1
3,276,489	-		PFLU_RS14660	0.27	+0.9
3,276,512	+		PFLU_RS14660	0.30	+0.3
3,276,512	+		PFLU_RS14660	0.30	-0.7
3,276,512	+		PFLU_RS14660	0.30	-0.1
3,276,513	-		PFLU_RS14660	0.30	-2.7
3,276,545	+		PFLU_RS14660	0.34	+0.8
3,276,545	+		PFLU_RS14660	0.34	-1.2
3,276,545	+		PFLU_RS14660	0.34	-1.9
3,276,546	-		PFLU_RS14660	0.34	+2.9
3,276,546	-		PFLU_RS14660	0.34	-2.7
3,276,546	-		PFLU_RS14660	0.34	+3.3
3,276,546	-		PFLU_RS14660	0.34	-1.0
3,276,546	-		PFLU_RS14660	0.34	-0.5
3,276,546	-		PFLU_RS14660	0.34	+0.1
3,276,563	+		PFLU_RS14660	0.36	+0.6
3,276,563	+		PFLU_RS14660	0.36	+0.3
3,276,563	+		PFLU_RS14660	0.36	+1.3
3,276,564	-		PFLU_RS14660	0.36	-1.2
3,276,564	-		PFLU_RS14660	0.36	-0.2
3,276,564	-		PFLU_RS14660	0.36	-2.5
3,276,620	+		PFLU_RS14660	0.42	+0.5
3,276,620	+		PFLU_RS14660	0.42	+4.0
3,276,620	+		PFLU_RS14660	0.42	+2.7
3,276,620	+		PFLU_RS14660	0.42	-2.6
3,276,620	+		PFLU_RS14660	0.42	+0.7
3,276,620	+		PFLU_RS14660	0.42	-0.7
3,276,620	+		PFLU_RS14660	0.42	-1.7
3,276,620	+		PFLU_RS14660	0.42	+0.6
3,276,620	+		PFLU_RS14660	0.42	+2.2
3,276,620	+		PFLU_RS14660	0.42	+1.3
3,276,620	+		PFLU_RS14660	0.42	-1.5
3,276,620	+		PFLU_RS14660	0.42	-0.7
3,276,620	+		PFLU_RS14660	0.42	+0.2
3,276,620	+		PFLU_RS14660	0.42	+0.6
3,276,620	+		PFLU_RS14660	0.42	+0.2
3,276,621	-		PFLU_RS14660	0.42	+2.7
3,276,621	-		PFLU_RS14660	0.42	-0.4
3,276,621	-		PFLU_RS14660	0.42	-0.8
3,276,621	-		PFLU_RS14660	0.42	-0.7
3,276,621	-		PFLU_RS14660	0.42	-2.2
3,276,621	-		PFLU_RS14660	0.42	+1.3
3,276,621	-		PFLU_RS14660	0.42	-0.0
3,276,621	-		PFLU_RS14660	0.42	+1.8
3,276,621	-		PFLU_RS14660	0.42	-1.2
3,276,621	-		PFLU_RS14660	0.42	-0.2
3,276,621	-		PFLU_RS14660	0.42	-2.0
3,276,621	-		PFLU_RS14660	0.42	-1.0
3,276,621	-		PFLU_RS14660	0.42	+0.7
3,276,621	-		PFLU_RS14660	0.42	-1.5
3,276,621	-		PFLU_RS14660	0.42	-1.0
3,276,626	+		PFLU_RS14660	0.43	-0.4
3,276,626	+		PFLU_RS14660	0.43	+0.3
3,276,626	+		PFLU_RS14660	0.43	+0.1
3,276,626	+		PFLU_RS14660	0.43	-1.6
3,276,626	+		PFLU_RS14660	0.43	+0.3
3,276,627	-		PFLU_RS14660	0.43	+1.3
3,276,627	-		PFLU_RS14660	0.43	-1.5
3,276,728	+		PFLU_RS14660	0.55	-0.7
3,276,729	-		PFLU_RS14660	0.55	+2.2
3,276,729	-		PFLU_RS14660	0.55	-1.7
3,276,729	-		PFLU_RS14660	0.55	-1.7
3,276,992	+		PFLU_RS14660	0.85	+1.6
3,276,992	+		PFLU_RS14660	0.85	+1.8
3,276,993	-		PFLU_RS14660	0.85	-1.0
3,276,993	-		PFLU_RS14660	0.85	+1.1
3,277,075	+				-0.7
3,277,075	+				+0.6
3,277,075	+				+1.6
3,277,075	+				-1.0
3,277,075	+				+0.9
3,277,075	+				-1.2
3,277,075	+				-1.2
3,277,075	+				+1.2
3,277,075	+				-1.5
3,277,075	+				+2.0
3,277,075	+				+1.5
3,277,075	+				-1.7
3,277,075	+				-0.9
3,277,076	-				+1.1
3,277,076	-				-1.7
3,277,076	-				-0.7
3,277,076	-				+0.3
3,277,076	-				-2.9
3,277,076	-				-0.2
3,277,076	-				-1.1
3,277,076	-				+0.3
3,277,076	-				-0.7
3,277,076	-				+2.3
3,277,076	-				+0.3
3,277,094	-				+0.0
3,277,140	+				-0.1
3,277,140	+				-1.7
3,277,140	+				+0.3
3,277,140	+				+1.8
3,277,140	+				-1.2
3,277,140	+				-2.0
3,277,141	-				-0.7
3,277,141	-				-1.1
3,277,141	-				-1.2
3,277,141	-				-0.7
3,277,141	-				+0.9