Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS21725

Experiment: Glucose (C) and Betaine (N); with TAPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glucose (C) and Betaine (N); with TAPS
4,891,284	+				+2.0
4,891,284	+				+1.5
4,891,285	-				+1.3
4,891,296	+				+1.0
4,891,296	+				+0.3
4,891,296	+				+1.2
4,891,296	+				+0.9
4,891,296	+				+1.0
4,891,296	+				+1.2
4,891,296	+				+0.8
4,891,296	+				+1.1
4,891,296	+				+0.9
4,891,296	+				+1.0
4,891,296	+				+0.9
4,891,296	+				+1.8
4,891,297	-				+2.3
4,891,297	-				+2.6
4,891,297	-				+1.4
4,891,297	-				+3.3
4,891,297	-				+0.3
4,891,297	-				+2.7
4,891,303	+				+2.1
4,891,303	+				+3.3
4,891,303	+				+1.9
4,891,303	+				+1.9
4,891,303	+				+2.5
4,891,304	-				+2.2
4,891,304	-				+2.0
4,891,304	-				+2.4
4,891,304	-				+0.3
4,891,706	+				+1.5
4,891,707	-				+1.5
4,891,732	+				+1.9
4,891,732	+				+1.9
4,892,103	-		PFLU_RS21720	0.79	+0.5
4,892,202	+				+1.1
4,892,202	+				+1.8
4,892,202	+				+2.1
4,892,202	+				+0.3
4,892,202	+				+1.6
4,892,202	+				+2.0
4,892,202	+				+2.3
4,892,202	+				+1.1
4,892,202	+				+1.7
4,892,202	+				+1.3
4,892,202	+				+2.6
4,892,202	+				+1.1
4,892,202	+				+1.1
4,892,202	+				+2.8
4,892,202	+				+1.5
4,892,202	+				+1.9
4,892,202	+				+2.0
4,892,202	+				+0.5
4,892,202	+				+1.1
4,892,202	+				+2.4
4,892,202	+				+1.2
4,892,202	+				+2.7
4,892,202	+				+1.4
4,892,202	+				+2.2
4,892,202	+				+1.5
4,892,202	+				+2.0
4,892,202	+				+2.4
4,892,202	+				+1.9
4,892,202	+				+2.0
4,892,202	+				+1.8
4,892,202	+				+2.4
4,892,202	+				+0.9
4,892,202	+				+2.1
4,892,202	+				+1.9
4,892,202	+				+2.4
4,892,202	+				+1.6
4,892,202	+				+2.7
4,892,202	+				+2.0
4,892,202	+				+1.1
4,892,202	+				+0.8
4,892,202	+				+1.5
4,892,202	+				+2.5
4,892,203	-				+1.9
4,892,203	-				+2.2
4,892,203	-				+1.0
4,892,203	-				+2.1
4,892,203	-				+2.0
4,892,203	-				+1.8
4,892,203	-				+2.2
4,892,203	-				+2.1
4,892,203	-				+0.8
4,892,203	-				+3.4
4,892,203	-				+1.9
4,892,203	-				+1.5
4,892,203	-				+1.7
4,892,203	-				+0.6
4,892,203	-				+2.1
4,892,203	-				+2.2
4,892,203	-				+0.6
4,892,203	-				+2.0
4,892,203	-				+2.5
4,892,203	-				+1.8
4,892,203	-				+2.3
4,892,203	-				+0.9
4,892,203	-				+2.7
4,892,203	-				+2.1
4,892,203	-				+1.7
4,892,203	-				+2.1
4,892,203	-				+2.5
4,892,203	-				+0.1
4,892,203	-				+1.2
4,892,203	-				+2.2
4,892,203	-				+1.4
4,892,203	-				+2.9
4,892,203	-				+1.3
4,892,203	-				+1.9
4,892,203	-				+2.9
4,892,203	-				+1.0
4,892,203	-				+3.7
4,892,203	-				+1.9
4,892,203	-				+1.4
4,892,203	-				+1.8
4,892,203	-				+2.3
4,892,230	+				+1.9
4,892,230	+				+0.3
4,892,230	+				+3.0
4,892,230	+				+1.3
4,892,230	+				+1.3
4,892,230	+				+1.7
4,892,230	+				+2.7
4,892,230	+				+2.9
4,892,230	+				+2.0
4,892,230	+				+1.7
4,892,230	+				+2.1
4,892,230	+				+1.7
4,892,231	-				-0.7
4,892,231	-				+0.3
4,892,231	-				-1.8
4,892,231	-				-1.1
4,892,231	-				+0.3
4,892,231	-				-0.8
4,892,231	-				-0.0
4,892,231	-				-0.2
4,892,231	-				+0.3
4,892,231	-				+0.1
4,892,231	-				-0.1
4,892,231	-				-0.6
4,892,231	-				-0.2
4,892,231	-				+0.2
4,892,231	-				+1.5
4,892,231	-				+1.3
4,892,231	-				-0.4
4,892,234	+				+2.1
4,892,234	+				+2.3
4,892,234	+				+1.8
4,892,234	+				+2.6
4,892,234	+				+3.5
4,892,234	+				+1.4
4,892,234	+				+1.5
4,892,235	-				-0.7
4,892,235	-				-0.1
4,892,235	-				+0.3
4,892,235	-				+0.6
4,892,235	-				-0.5
4,892,694	+		PFLU_RS21725	0.45	+1.9
4,892,694	+		PFLU_RS21725	0.45	+2.3
4,892,695	-		PFLU_RS21725	0.45	+1.1
4,892,695	-		PFLU_RS21725	0.45	+1.2
4,892,695	-		PFLU_RS21725	0.45	+2.7
4,892,695	-		PFLU_RS21725	0.45	+1.5
4,892,695	-		PFLU_RS21725	0.45	+0.2
4,892,695	-		PFLU_RS21725	0.45	-1.3
4,892,772	-		PFLU_RS21725	0.53	-0.2
4,892,929	+		PFLU_RS21725	0.69	+1.6
4,892,930	-		PFLU_RS21725	0.69	+1.6
4,892,930	-		PFLU_RS21725	0.69	+2.1
4,892,930	-		PFLU_RS21725	0.69	+1.9
4,892,937	+		PFLU_RS21725	0.70	+0.7
4,892,937	+		PFLU_RS21725	0.70	+2.4
4,892,937	+		PFLU_RS21725	0.70	+1.1
4,892,937	+		PFLU_RS21725	0.70	+2.0
4,892,938	-		PFLU_RS21725	0.70	+1.2
4,892,938	-		PFLU_RS21725	0.70	+1.3
4,892,938	-		PFLU_RS21725	0.70	+1.3
4,892,952	+		PFLU_RS21725	0.72	+1.1
4,892,952	+		PFLU_RS21725	0.72	+1.4
4,892,952	+		PFLU_RS21725	0.72	+2.0
4,892,952	+		PFLU_RS21725	0.72	+2.6
4,892,952	+		PFLU_RS21725	0.72	+1.7
4,892,952	+		PFLU_RS21725	0.72	+1.6
4,892,952	+		PFLU_RS21725	0.72	+1.7
4,892,952	+		PFLU_RS21725	0.72	+2.3
4,892,952	+		PFLU_RS21725	0.72	+1.7
4,892,953	-		PFLU_RS21725	0.72	+2.0
4,892,953	-		PFLU_RS21725	0.72	+2.2
4,892,953	-		PFLU_RS21725	0.72	+1.7
4,892,953	-		PFLU_RS21725	0.72	+3.1
4,893,036	+		PFLU_RS21725	0.80	+0.3
4,893,036	+		PFLU_RS21725	0.80	+1.6
4,893,114	+		PFLU_RS21725	0.88	+1.3
4,893,114	+		PFLU_RS21725	0.88	+2.9
4,893,114	+		PFLU_RS21725	0.88	+3.2
4,893,114	+		PFLU_RS21725	0.88	+2.2
4,893,114	+		PFLU_RS21725	0.88	+1.3
4,893,115	-		PFLU_RS21725	0.88	+1.7
4,893,115	-		PFLU_RS21725	0.88	+1.6
4,893,115	-		PFLU_RS21725	0.88	+1.7
4,893,155	+				+3.0
4,893,156	-				+2.0
4,893,156	-				+1.1
4,893,156	-				+2.5
4,893,237	+				+2.0
4,893,237	+				-0.5
4,893,238	-				+4.0
4,893,238	-				+0.0
4,893,245	+				+3.1
4,893,246	-				+0.8
4,893,246	-				-0.6
4,893,246	-				+0.7
4,893,253	+				+1.3
4,893,254	-				+3.1
4,893,421	+		PFLU_RS21730	0.37	+2.3
4,893,421	+		PFLU_RS21730	0.37	+1.6
4,893,421	+		PFLU_RS21730	0.37	+2.5
4,893,421	+		PFLU_RS21730	0.37	+1.7
4,893,421	+		PFLU_RS21730	0.37	+2.0
4,893,421	+		PFLU_RS21730	0.37	+0.1
4,893,421	+		PFLU_RS21730	0.37	+1.8
4,893,421	+		PFLU_RS21730	0.37	+2.0
4,893,421	+		PFLU_RS21730	0.37	+1.9
4,893,422	-		PFLU_RS21730	0.37	-0.9
4,893,422	-		PFLU_RS21730	0.37	-0.7
4,893,422	-		PFLU_RS21730	0.37	+0.2
4,893,422	-		PFLU_RS21730	0.37	+0.8
4,893,422	-		PFLU_RS21730	0.37	+0.1
4,893,422	-		PFLU_RS21730	0.37	+0.1
4,893,422	-		PFLU_RS21730	0.37	+1.0
4,893,422	-		PFLU_RS21730	0.37	-0.4
4,893,487	-		PFLU_RS21730	0.50	+1.1
4,893,487	-		PFLU_RS21730	0.50	+0.3
4,893,487	-		PFLU_RS21730	0.50	-1.3
4,893,618	+		PFLU_RS21730	0.76	+1.4
4,893,618	+		PFLU_RS21730	0.76	+1.7
4,893,618	+		PFLU_RS21730	0.76	+0.6
4,893,618	+		PFLU_RS21730	0.76	+2.4
4,893,618	+		PFLU_RS21730	0.76	-0.8
4,893,618	+		PFLU_RS21730	0.76	+1.7
4,893,618	+		PFLU_RS21730	0.76	+2.3
4,893,618	+		PFLU_RS21730	0.76	+1.6
4,893,618	+		PFLU_RS21730	0.76	+1.8
4,893,619	-		PFLU_RS21730	0.76	+1.1
4,893,619	-		PFLU_RS21730	0.76	+1.8
4,893,619	-		PFLU_RS21730	0.76	+0.3
4,893,619	-		PFLU_RS21730	0.76	+1.3
4,893,619	-		PFLU_RS21730	0.76	-0.1
4,893,619	-		PFLU_RS21730	0.76	+1.7
4,893,619	-		PFLU_RS21730	0.76	+0.7
4,893,619	-		PFLU_RS21730	0.76	+0.5
4,893,619	-		PFLU_RS21730	0.76	+1.0
4,893,668	+		PFLU_RS21730	0.86	+1.4
4,893,668	+		PFLU_RS21730	0.86	+1.7
4,893,668	+		PFLU_RS21730	0.86	+1.7
4,893,669	-		PFLU_RS21730	0.86	-0.0
4,893,669	-		PFLU_RS21730	0.86	+1.2
4,893,669	-		PFLU_RS21730	0.86	+0.9
4,893,669	-		PFLU_RS21730	0.86	+0.9
4,893,669	-		PFLU_RS21730	0.86	+1.3
4,893,669	-		PFLU_RS21730	0.86	-0.4
4,893,669	-		PFLU_RS21730	0.86	+1.2
4,893,669	-		PFLU_RS21730	0.86	-0.7
4,893,669	-		PFLU_RS21730	0.86	+2.1
4,893,680	-		PFLU_RS21730	0.89	+1.1
4,893,680	-		PFLU_RS21730	0.89	+2.6
4,893,680	-		PFLU_RS21730	0.89	+1.6
4,893,691	+				+2.1
4,893,691	+				+2.5
4,893,691	+				+1.3
4,893,691	+				+1.8
4,893,691	+				+2.0
4,893,691	+				+2.9
4,893,691	+				+1.9
4,893,692	-				+0.8
4,893,692	-				+1.2
4,893,692	-				+2.0
4,893,742	+				+2.0
4,893,754	-				+0.5
4,893,767	+				+3.0
4,893,767	+				+1.7
4,893,767	+				+2.0
4,893,767	+				+3.3
4,893,767	+				+2.9
4,893,767	+				+2.2
4,893,768	-				+0.0
4,893,768	-				-1.5
4,893,768	-				-0.9
4,893,768	-				-0.3
4,893,768	-				+1.0
4,893,768	-				-1.2
4,893,768	-				-0.4
4,893,768	-				-0.3
4,893,768	-				+1.8
4,893,768	-				+0.1
4,893,768	-				+0.5
4,893,768	-				-1.1
4,893,768	-				-0.8
4,893,773	+				+0.1
4,893,774	-				+0.2
4,893,774	-				-0.4
4,893,774	-				-0.3
4,893,774	-				-1.1
4,893,774	-				-0.5
4,893,796	+				+2.2
4,893,797	-				+1.6
4,893,825	+				+0.1
4,893,825	+				+0.1
4,893,825	+				+0.3
4,893,826	-				-1.9
4,893,826	-				+1.3
4,893,826	-				+0.1
4,893,826	-				+0.7
4,893,826	-				-0.1
4,893,877	+				-0.3
4,893,877	+				+1.5
4,893,877	+				+0.7
4,893,877	+				-2.9
4,893,877	+				+0.2
4,893,877	+				-0.9
4,893,965	+				+1.5
4,893,965	+				+0.5
4,893,965	+				+1.5
4,893,966	-				+1.7
4,893,968	+				+2.4
4,893,968	+				+2.9
4,893,968	+				+1.4
4,893,968	+				+1.6
4,893,969	-				+1.2
4,893,969	-				+2.8
4,893,969	-				+2.0
4,893,969	-				+2.2
4,893,969	-				+1.6
4,893,969	-				+1.2