Experiment: LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS23625 and BWI76_RS23630 are separated by 166 nucleotides BWI76_RS23630 and BWI76_RS23635 are separated by 40 nucleotides
BWI76_RS23625: BWI76_RS23625 - helix-turn-helix transcriptional regulator, at 4,926,707 to 4,929,418
_RS23625
BWI76_RS23630: BWI76_RS23630 - acetoin(diacetyl) reductase, at 4,929,585 to 4,930,364
_RS23630
BWI76_RS23635: BWI76_RS23635 - MFS transporter, at 4,930,405 to 4,931,958
_RS23635
Position (kb) 4929
4930
4931 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4928.587 kb on + strand, within BWI76_RS23625 at 4928.777 kb on + strand, within BWI76_RS23625 at 4928.786 kb on + strand, within BWI76_RS23625 at 4928.833 kb on - strand, within BWI76_RS23625 at 4928.838 kb on - strand, within BWI76_RS23625 at 4928.839 kb on - strand, within BWI76_RS23625 at 4929.058 kb on + strand, within BWI76_RS23625 at 4929.166 kb on + strand at 4929.235 kb on + strand at 4929.356 kb on + strand at 4929.431 kb on + strand at 4929.439 kb on - strand at 4929.574 kb on - strand at 4929.624 kb on + strand at 4929.788 kb on + strand, within BWI76_RS23630 at 4929.788 kb on + strand, within BWI76_RS23630 at 4929.788 kb on + strand, within BWI76_RS23630 at 4929.829 kb on + strand, within BWI76_RS23630 at 4930.286 kb on - strand, within BWI76_RS23630 at 4930.559 kb on + strand at 4930.597 kb on + strand, within BWI76_RS23635 at 4930.700 kb on - strand, within BWI76_RS23635 at 4930.714 kb on + strand, within BWI76_RS23635 at 4930.715 kb on - strand, within BWI76_RS23635 at 4930.805 kb on - strand, within BWI76_RS23635 at 4930.880 kb on + strand, within BWI76_RS23635 at 4930.982 kb on + strand, within BWI76_RS23635 at 4931.009 kb on - strand, within BWI76_RS23635 at 4931.093 kb on + strand, within BWI76_RS23635 at 4931.106 kb on - strand, within BWI76_RS23635 at 4931.156 kb on + strand, within BWI76_RS23635 at 4931.169 kb on - strand, within BWI76_RS23635 at 4931.204 kb on - strand, within BWI76_RS23635
Per-strain Table
Position Strand Gene LocusTag Fraction LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL remove 4,928,587 + BWI76_RS23625 0.69 +0.8 4,928,777 + BWI76_RS23625 0.76 -1.4 4,928,786 + BWI76_RS23625 0.77 -0.0 4,928,833 - BWI76_RS23625 0.78 +0.1 4,928,838 - BWI76_RS23625 0.79 +1.0 4,928,839 - BWI76_RS23625 0.79 +0.5 4,929,058 + BWI76_RS23625 0.87 +0.5 4,929,166 + +0.6 4,929,235 + -2.0 4,929,356 + +0.0 4,929,431 + +0.8 4,929,439 - +0.3 4,929,574 - +1.1 4,929,624 + -0.3 4,929,788 + BWI76_RS23630 0.26 -2.1 4,929,788 + BWI76_RS23630 0.26 -0.5 4,929,788 + BWI76_RS23630 0.26 +0.8 4,929,829 + BWI76_RS23630 0.31 -0.6 4,930,286 - BWI76_RS23630 0.90 -0.3 4,930,559 + +0.1 4,930,597 + BWI76_RS23635 0.12 -1.1 4,930,700 - BWI76_RS23635 0.19 -0.8 4,930,714 + BWI76_RS23635 0.20 -0.2 4,930,715 - BWI76_RS23635 0.20 +0.5 4,930,805 - BWI76_RS23635 0.26 +0.6 4,930,880 + BWI76_RS23635 0.31 +0.2 4,930,982 + BWI76_RS23635 0.37 -1.4 4,931,009 - BWI76_RS23635 0.39 +0.1 4,931,093 + BWI76_RS23635 0.44 +1.2 4,931,106 - BWI76_RS23635 0.45 -0.5 4,931,156 + BWI76_RS23635 0.48 +0.2 4,931,169 - BWI76_RS23635 0.49 +0.6 4,931,204 - BWI76_RS23635 0.51 +2.4
Or see this region's nucleotide sequence