Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS23530
Experiment: LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL |
---|---|---|---|---|---|
remove | |||||
4,907,526 | + | -2.1 | |||
4,907,534 | - | +0.6 | |||
4,907,597 | + | +0.7 | |||
4,907,753 | + | BWI76_RS23525 | 0.24 | -1.3 | |
4,907,792 | - | BWI76_RS23525 | 0.28 | +0.2 | |
4,907,792 | - | BWI76_RS23525 | 0.28 | +0.8 | |
4,907,796 | - | BWI76_RS23525 | 0.29 | -0.2 | |
4,907,819 | - | BWI76_RS23525 | 0.31 | -0.8 | |
4,907,999 | - | BWI76_RS23525 | 0.52 | +1.4 | |
4,908,128 | + | BWI76_RS23525 | 0.66 | -2.7 | |
4,908,193 | - | BWI76_RS23525 | 0.73 | -0.0 | |
4,908,522 | + | -1.1 | |||
4,908,525 | - | -0.1 | |||
4,908,527 | + | +0.5 | |||
4,908,630 | - | BWI76_RS23530 | 0.24 | +0.2 | |
4,908,742 | - | BWI76_RS23530 | 0.46 | +1.4 | |
4,908,880 | + | BWI76_RS23530 | 0.73 | +1.2 | |
4,908,987 | + | -0.4 | |||
4,909,019 | - | -0.6 | |||
4,909,091 | + | +1.4 | |||
4,909,099 | - | +1.7 | |||
4,909,161 | - | BWI76_RS23535 | 0.13 | -0.2 | |
4,909,193 | - | BWI76_RS23535 | 0.20 | -0.3 | |
4,909,247 | - | BWI76_RS23535 | 0.32 | -0.8 | |
4,909,692 | + | -0.1 | |||
4,909,705 | - | -0.6 | |||
4,909,705 | - | +0.4 | |||
4,909,705 | - | -1.4 | |||
4,909,783 | + | BWI76_RS23540 | 0.12 | -1.5 | |
4,910,010 | - | BWI76_RS23540 | 0.49 | +0.2 |
Or see this region's nucleotide sequence