Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS23515
Experiment: LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL |
---|---|---|---|---|---|
remove | |||||
4,905,245 | + | +1.9 | |||
4,905,253 | - | +0.8 | |||
4,905,286 | + | -1.8 | |||
4,905,294 | - | -0.4 | |||
4,905,308 | + | +0.2 | |||
4,905,308 | + | -0.8 | |||
4,905,326 | - | -0.9 | |||
4,905,338 | - | +1.8 | |||
4,905,505 | + | +0.9 | |||
4,905,525 | - | +1.8 | |||
4,905,527 | + | +0.5 | |||
4,905,530 | + | -1.9 | |||
4,905,572 | + | BWI76_RS23510 | 0.14 | +0.3 | |
4,905,573 | - | BWI76_RS23510 | 0.14 | -2.2 | |
4,905,714 | - | BWI76_RS23510 | 0.33 | +0.2 | |
4,905,740 | + | BWI76_RS23510 | 0.37 | +0.1 | |
4,905,748 | - | BWI76_RS23510 | 0.38 | -1.3 | |
4,905,781 | + | +1.2 | |||
4,905,833 | + | BWI76_RS23510 | 0.50 | +1.2 | |
4,905,875 | - | BWI76_RS23510 | 0.56 | +1.1 | |
4,906,055 | - | BWI76_RS23510 | 0.80 | +1.2 | |
4,906,413 | + | BWI76_RS23515 | 0.56 | -1.2 | |
4,906,488 | - | BWI76_RS23515 | 0.80 | -2.4 | |
4,906,523 | + | +2.2 | |||
4,906,538 | - | -1.8 | |||
4,906,612 | - | -2.7 | |||
4,906,802 | + | -1.0 | |||
4,907,013 | - | BWI76_RS23520 | 0.37 | +0.9 | |
4,907,133 | - | -0.1 | |||
4,907,173 | - | +0.1 | |||
4,907,173 | - | +1.2 | |||
4,907,380 | - | -0.7 | |||
4,907,380 | - | -2.0 | |||
4,907,394 | - | +2.8 | |||
4,907,407 | + | -1.1 | |||
4,907,422 | - | +0.1 | |||
4,907,439 | - | -2.0 | |||
4,907,526 | + | -2.1 | |||
4,907,534 | - | +0.6 |
Or see this region's nucleotide sequence