Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS22280
Experiment: LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL |
---|---|---|---|---|---|
remove | |||||
4,644,032 | + | BWI76_RS22275 | 0.61 | +0.2 | |
4,644,147 | - | BWI76_RS22275 | 0.66 | -0.5 | |
4,644,471 | + | BWI76_RS22275 | 0.81 | -1.1 | |
4,644,491 | - | BWI76_RS22275 | 0.82 | +0.6 | |
4,644,506 | + | BWI76_RS22275 | 0.82 | -0.3 | |
4,644,569 | + | BWI76_RS22275 | 0.85 | +0.1 | |
4,644,889 | - | +0.4 | |||
4,644,923 | - | +0.7 | |||
4,644,923 | - | -0.1 | |||
4,644,961 | - | -1.1 | |||
4,644,963 | + | BWI76_RS22280 | 0.10 | +0.2 | |
4,645,001 | + | BWI76_RS22280 | 0.17 | +3.1 | |
4,645,083 | - | BWI76_RS22280 | 0.33 | -0.1 | |
4,645,202 | + | BWI76_RS22280 | 0.55 | +1.1 | |
4,645,225 | + | BWI76_RS22280 | 0.60 | +1.0 | |
4,645,379 | + | BWI76_RS22280 | 0.89 | +0.7 | |
4,645,409 | - | -0.3 | |||
4,645,770 | + | BWI76_RS22285 | 0.20 | +0.7 | |
4,645,778 | - | BWI76_RS22285 | 0.20 | -0.5 | |
4,645,778 | - | BWI76_RS22285 | 0.20 | +0.8 | |
4,645,789 | + | BWI76_RS22285 | 0.21 | -0.0 | |
4,646,340 | + | BWI76_RS22285 | 0.76 | +1.1 | |
4,646,350 | - | BWI76_RS22285 | 0.77 | +0.1 | |
4,646,357 | + | BWI76_RS22285 | 0.78 | -0.6 |
Or see this region's nucleotide sequence