Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS21365
Experiment: LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL |
---|---|---|---|---|---|
remove | |||||
4,471,756 | - | BWI76_RS21360 | 0.41 | +0.2 | |
4,471,817 | + | BWI76_RS21360 | 0.45 | -0.7 | |
4,471,927 | - | BWI76_RS21360 | 0.52 | +0.6 | |
4,472,040 | - | BWI76_RS21360 | 0.59 | +2.7 | |
4,472,224 | + | BWI76_RS21360 | 0.70 | -1.2 | |
4,472,253 | + | BWI76_RS21360 | 0.72 | +0.4 | |
4,472,288 | - | BWI76_RS21360 | 0.74 | +1.3 | |
4,472,578 | + | -1.7 | |||
4,472,625 | + | -0.7 | |||
4,472,647 | + | +0.5 | |||
4,472,655 | - | -0.4 | |||
4,472,760 | - | -0.6 | |||
4,473,262 | - | BWI76_RS21365 | 0.76 | +0.7 | |
4,473,297 | + | BWI76_RS21365 | 0.81 | +1.0 | |
4,473,297 | + | BWI76_RS21365 | 0.81 | -0.3 | |
4,473,297 | + | BWI76_RS21365 | 0.81 | +1.0 | |
4,473,305 | - | BWI76_RS21365 | 0.82 | +0.3 | |
4,473,395 | + | +0.9 | |||
4,473,469 | + | +0.8 | |||
4,473,476 | + | -0.1 | |||
4,473,477 | - | -0.1 | |||
4,473,804 | + | BWI76_RS21370 | 0.18 | -2.6 | |
4,473,812 | - | BWI76_RS21370 | 0.18 | -0.3 |
Or see this region's nucleotide sequence