Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS20960
Experiment: LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL |
---|---|---|---|---|---|
remove | |||||
4,380,301 | - | BWI76_RS20955 | 0.37 | -0.4 | |
4,380,302 | - | BWI76_RS20955 | 0.37 | -0.4 | |
4,380,324 | + | BWI76_RS20955 | 0.39 | +1.5 | |
4,380,359 | + | BWI76_RS20955 | 0.41 | +0.5 | |
4,380,359 | + | BWI76_RS20955 | 0.41 | -0.6 | |
4,380,367 | - | BWI76_RS20955 | 0.42 | +0.1 | |
4,380,522 | - | BWI76_RS20955 | 0.52 | -0.2 | |
4,380,765 | - | BWI76_RS20955 | 0.69 | -2.4 | |
4,380,870 | + | BWI76_RS20955 | 0.77 | +0.9 | |
4,381,207 | + | -0.3 | |||
4,381,291 | + | +0.0 | |||
4,381,419 | + | BWI76_RS20960 | 0.23 | -1.0 | |
4,381,427 | - | BWI76_RS20960 | 0.24 | +0.2 | |
4,381,475 | - | BWI76_RS20960 | 0.30 | +4.3 | |
4,381,839 | - | BWI76_RS20960 | 0.70 | +1.2 | |
4,381,839 | - | BWI76_RS20960 | 0.70 | +0.9 | |
4,382,355 | + | +0.2 | |||
4,382,628 | - | BWI76_RS20965 | 0.25 | +0.4 | |
4,382,639 | - | BWI76_RS20965 | 0.26 | +0.7 |
Or see this region's nucleotide sequence