Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS20795
Experiment: LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL |
---|---|---|---|---|---|
remove | |||||
4,346,342 | + | BWI76_RS20790 | 0.31 | -0.3 | |
4,346,544 | - | BWI76_RS20790 | 0.46 | -1.1 | |
4,346,605 | + | BWI76_RS20790 | 0.50 | +0.4 | |
4,346,644 | - | BWI76_RS20790 | 0.53 | +0.4 | |
4,347,523 | + | BWI76_RS20795 | 0.72 | +0.8 | |
4,347,955 | + | BWI76_RS20800 | 0.82 | +1.3 | |
4,347,963 | - | BWI76_RS20800 | 0.85 | -0.5 | |
4,347,963 | - | BWI76_RS20800 | 0.85 | +0.4 | |
4,348,572 | + | BWI76_RS20805 | 0.52 | -0.4 | |
4,348,572 | + | BWI76_RS20805 | 0.52 | +0.2 | |
4,348,572 | + | BWI76_RS20805 | 0.52 | -0.5 |
Or see this region's nucleotide sequence