Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS18885
Experiment: LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL |
---|---|---|---|---|---|
remove | |||||
3,914,792 | + | +0.3 | |||
3,914,813 | - | -0.4 | |||
3,915,397 | - | -0.1 | |||
3,915,641 | + | -0.3 | |||
3,916,112 | + | BWI76_RS18885 | 0.33 | -1.7 | |
3,916,779 | - | BWI76_RS18885 | 0.78 | -0.3 | |
3,916,853 | - | BWI76_RS18885 | 0.83 | -0.5 | |
3,917,080 | + | +0.1 | |||
3,917,098 | - | -0.5 | |||
3,917,189 | + | +0.7 | |||
3,917,189 | + | +0.4 | |||
3,917,231 | + | -0.1 | |||
3,917,256 | + | +0.8 | |||
3,917,486 | - | BWI76_RS18890 | 0.24 | +0.6 | |
3,917,499 | - | BWI76_RS18890 | 0.25 | -1.3 | |
3,917,514 | + | BWI76_RS18890 | 0.26 | -0.3 | |
3,917,688 | - | BWI76_RS18890 | 0.37 | +0.8 | |
3,917,688 | - | BWI76_RS18890 | 0.37 | -3.3 | |
3,917,693 | - | BWI76_RS18890 | 0.37 | +0.1 | |
3,917,797 | - | BWI76_RS18890 | 0.44 | +0.2 | |
3,917,799 | + | BWI76_RS18890 | 0.44 | +0.2 | |
3,917,810 | - | BWI76_RS18890 | 0.45 | +0.2 | |
3,917,874 | - | BWI76_RS18890 | 0.49 | +0.2 | |
3,918,008 | - | BWI76_RS18890 | 0.57 | +1.0 |
Or see this region's nucleotide sequence