Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS18360
Experiment: LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL |
---|---|---|---|---|---|
remove | |||||
3,810,276 | + | BWI76_RS18350 | 0.60 | +0.1 | |
3,810,324 | - | BWI76_RS18350 | 0.66 | -0.4 | |
3,810,357 | + | BWI76_RS18350 | 0.70 | -1.2 | |
3,810,365 | - | BWI76_RS18350 | 0.71 | -0.5 | |
3,810,437 | - | BWI76_RS18350 | 0.81 | -3.2 | |
3,810,518 | - | -0.4 | |||
3,810,600 | + | -0.8 | |||
3,810,724 | + | BWI76_RS18355 | 0.22 | +1.5 | |
3,810,737 | - | BWI76_RS18355 | 0.24 | +0.3 | |
3,811,005 | - | BWI76_RS18355 | 0.64 | +0.4 | |
3,811,173 | - | BWI76_RS18355 | 0.89 | -0.2 | |
3,811,226 | + | -0.1 | |||
3,811,234 | - | -0.2 | |||
3,811,286 | + | -0.5 | |||
3,811,486 | + | BWI76_RS18360 | 0.23 | +1.8 | |
3,811,800 | - | BWI76_RS18360 | 0.55 | -2.4 | |
3,811,968 | - | BWI76_RS18360 | 0.72 | +1.1 | |
3,812,259 | - | -0.0 | |||
3,812,430 | + | BWI76_RS18365 | 0.11 | +0.8 | |
3,812,451 | + | BWI76_RS18365 | 0.14 | -0.6 | |
3,812,451 | + | BWI76_RS18365 | 0.14 | -0.6 | |
3,812,459 | - | BWI76_RS18365 | 0.15 | +0.5 | |
3,812,777 | - | BWI76_RS18365 | 0.54 | -0.1 | |
3,812,997 | - | BWI76_RS18365 | 0.82 | -1.8 | |
3,813,035 | - | BWI76_RS18365 | 0.87 | -0.6 | |
3,813,130 | - | -2.5 | |||
3,813,183 | - | +0.5 | |||
3,813,184 | + | +1.1 |
Or see this region's nucleotide sequence