Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS18020

Experiment: LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL
3,743,385	-				-0.1
3,743,659	+		BWI76_RS18015	0.15	+0.0
3,743,766	-		BWI76_RS18015	0.32	+0.4
3,743,819	+		BWI76_RS18015	0.40	+0.4
3,743,829	-		BWI76_RS18015	0.41	+0.0
3,744,070	-		BWI76_RS18015	0.78	+0.9
3,744,092	+		BWI76_RS18015	0.82	-1.7
3,744,103	+		BWI76_RS18015	0.83	-0.4
3,744,103	+		BWI76_RS18015	0.83	-1.0
3,744,111	-		BWI76_RS18015	0.85	-2.0
3,744,111	-		BWI76_RS18015	0.85	+0.5
3,744,111	-		BWI76_RS18015	0.85	+0.4
3,744,113	+		BWI76_RS18015	0.85	+0.5
3,744,132	-		BWI76_RS18015	0.88	-1.8
3,744,139	-		BWI76_RS18015	0.89	-0.3
3,744,144	+		BWI76_RS18015	0.90	-3.0
3,744,157	-				+1.0
3,744,157	-				-1.8
3,744,184	+				+0.0
3,744,192	+				-2.4
3,744,192	+				-2.3
3,744,258	+				-0.9
3,744,259	+				-1.3
3,744,261	+				+0.5
3,744,304	-				-1.7
3,744,316	+				-0.5
3,744,316	+				-1.7
3,744,316	+				-0.3
3,744,324	-				+0.2
3,744,324	-				-0.6
3,744,324	-				+0.5
3,744,324	-				-0.5
3,744,324	-				-1.8
3,744,359	-				-0.3
3,744,384	+				-0.8
3,744,390	-				+0.4
3,744,394	+				+0.5
3,744,395	+				-0.6
3,744,402	-				-0.8
3,744,402	-				+0.3
3,744,403	-				+0.0
3,744,403	-				-3.4
3,744,403	-				+1.0
3,744,410	+				+0.0
3,744,413	-				+0.2
3,744,420	+				+0.4
3,744,428	-				-0.6
3,744,442	+				+5.2
3,744,442	+				+0.3
3,744,442	+				+0.6
3,744,442	+				+0.1
3,744,442	+				-1.2
3,744,442	+				+0.9
3,744,442	+				-2.1
3,744,442	+				+0.5
3,744,448	-				+0.5
3,744,453	+				-2.1
3,744,453	+				-1.3
3,744,453	+				+1.0
3,744,453	+				-0.8
3,744,453	+				+0.2
3,744,453	+				-0.6
3,744,454	+				-0.7
3,744,454	+				-0.5
3,744,454	+				+1.0
3,744,454	+				-0.5
3,744,454	+				-1.8
3,744,454	+				+0.6
3,744,454	+				-0.3
3,744,454	+				-0.8
3,744,454	+				-0.7
3,744,454	+				-0.1
3,744,454	+				+0.3
3,744,454	+				+0.9
3,744,454	+				+0.4
3,744,454	+				-0.4
3,744,454	+				-0.4
3,744,454	+				-2.7
3,744,454	+				+0.1
3,744,459	+				+1.6
3,744,460	-				+1.1
3,744,461	-				+0.4
3,744,461	-				-2.1
3,744,462	-				+0.3
3,744,462	-				+3.4
3,744,462	-				-1.7
3,744,462	-				+1.6
3,744,462	-				-0.8
3,744,462	-				+0.9
3,744,462	-				-2.3
3,744,462	-				-1.1
3,744,462	-				+0.9
3,744,462	-				-1.0
3,744,464	+				-0.0
3,744,464	+				-0.6
3,744,472	-		BWI76_RS18020	0.10	+0.7
3,744,479	-		BWI76_RS18020	0.11	-1.6
3,744,533	+		BWI76_RS18020	0.17	-0.6
3,744,542	+		BWI76_RS18020	0.17	-0.1
3,744,552	+		BWI76_RS18020	0.19	-1.3
3,744,552	-		BWI76_RS18020	0.19	+0.1
3,744,560	-		BWI76_RS18020	0.19	-0.9
3,744,560	-		BWI76_RS18020	0.19	-0.2
3,744,579	-		BWI76_RS18020	0.21	-2.9
3,744,580	+		BWI76_RS18020	0.21	-2.7
3,744,588	-		BWI76_RS18020	0.22	-2.0
3,744,596	-		BWI76_RS18020	0.23	+0.1
3,744,720	-		BWI76_RS18020	0.36	+0.4
3,744,751	+		BWI76_RS18020	0.40	-1.0
3,744,751	+		BWI76_RS18020	0.40	-0.5
3,744,929	+		BWI76_RS18020	0.58	+0.3
3,744,985	-		BWI76_RS18020	0.64	+0.8
3,745,122	-		BWI76_RS18020	0.79	-0.6
3,745,277	-				-2.3
3,745,295	+				-1.0
3,745,324	-				+1.0
3,745,367	-				-1.5
3,745,369	-				-1.3
3,745,487	+				-1.5
3,745,523	+				-2.4
3,745,549	-				-3.1
3,745,554	-				-1.6
3,745,634	+				+1.3
3,745,642	-				+0.2
3,745,711	+				+0.5
3,745,722	+				-2.4
3,745,727	+				+0.0
3,745,727	+				+1.0
3,745,727	+				-0.4
3,745,727	+				+0.4
3,745,735	-				+0.4
3,745,735	-				-0.5
3,745,735	-				-0.4
3,745,735	-				+0.0
3,745,735	-				-1.2
3,745,738	+				-2.0
3,745,741	-				+0.1
3,745,746	+				+0.3
3,745,746	+				+2.5
3,745,746	+				-1.3
3,745,746	+				-0.7
3,745,746	+				+1.1
3,745,746	-				-1.0
3,745,754	-				+0.5
3,745,754	-				-2.6
3,745,767	-				-0.6
3,745,767	-				+0.0
3,745,777	-				-2.1
3,745,786	-				-1.7
3,745,791	-				+0.6
3,745,791	-				-0.3
3,745,791	-				-0.1
3,745,793	+				+0.7
3,745,801	-				-0.7
3,745,811	-				-0.1
3,745,811	-				+0.5
3,745,815	+				-1.0
3,745,815	+				-0.2
3,745,815	+				+0.0
3,745,815	+				-1.0
3,745,823	-				+1.0
3,745,823	-				-0.1
3,745,823	-				-4.1
3,745,823	-				-1.6
3,745,903	+				-1.3
3,745,984	-				+0.6
3,745,989	-				+0.3
3,746,062	-				-0.2
3,746,062	-				-1.1
3,746,093	+				+0.2
3,746,101	-				+0.0
3,746,147	-				-1.4
3,746,159	+				+0.4
3,746,159	+				-0.6
3,746,159	+				+0.0
3,746,179	-				+0.6
3,746,179	-				-1.3
3,746,181	+				-0.6
3,746,181	+				-0.5
3,746,181	+				-2.0
3,746,181	+				+0.2
3,746,181	+				-0.8
3,746,181	+				-0.1
3,746,181	+				-0.3
3,746,181	+				-0.0
3,746,181	+				+0.2
3,746,181	+				-1.6
3,746,181	+				-1.1
3,746,181	+				-0.2
3,746,189	-				+0.0
3,746,189	-				-0.3
3,746,189	-				+1.4
3,746,189	-				+0.0
3,746,189	-				-0.9
3,746,189	-				-0.5
3,746,189	-				+1.0
3,746,240	-		BWI76_RS18025	0.16	-1.3
3,746,247	-		BWI76_RS18025	0.17	+1.8
3,746,268	+		BWI76_RS18025	0.21	+0.1
3,746,268	+		BWI76_RS18025	0.21	-1.3