Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS15255

Experiment: LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS15245 and BWI76_RS15250 are separated by 111 nucleotidesBWI76_RS15250 and BWI76_RS15255 are separated by 28 nucleotidesBWI76_RS15255 and BWI76_RS15260 overlap by 4 nucleotidesBWI76_RS15260 and BWI76_RS15265 are separated by 19 nucleotides BWI76_RS15245: BWI76_RS15245 - dihydrodipicolinate synthase family protein, at 3,195,372 to 3,196,256 _RS15245 BWI76_RS15250: BWI76_RS15250 - tellurium resistance protein TerC, at 3,196,368 to 3,197,129 _RS15250 BWI76_RS15255: BWI76_RS15255 - hypothetical protein, at 3,197,158 to 3,198,330 _RS15255 BWI76_RS15260: BWI76_RS15260 - hypothetical protein, at 3,198,327 to 3,198,797 _RS15260 BWI76_RS15265: BWI76_RS15265 - hypothetical protein, at 3,198,817 to 3,200,097 _RS15265 Position (kb) 3197 3198 3199Strain fitness (log2 ratio) -2 -1 0 1 2at 3196.173 kb on - strandat 3196.173 kb on - strandat 3196.186 kb on + strandat 3196.191 kb on + strandat 3196.194 kb on - strandat 3196.197 kb on + strandat 3196.198 kb on + strandat 3196.199 kb on - strandat 3196.204 kb on + strandat 3196.205 kb on - strandat 3196.205 kb on - strandat 3196.205 kb on - strandat 3196.212 kb on - strandat 3196.212 kb on - strandat 3196.212 kb on - strandat 3196.351 kb on + strandat 3196.533 kb on + strand, within BWI76_RS15250at 3197.100 kb on + strandat 3197.199 kb on + strandat 3197.205 kb on + strandat 3197.213 kb on - strandat 3197.224 kb on + strandat 3197.232 kb on + strandat 3197.232 kb on + strandat 3197.237 kb on + strandat 3197.293 kb on - strandat 3197.361 kb on + strand, within BWI76_RS15255at 3197.373 kb on + strand, within BWI76_RS15255at 3197.457 kb on + strand, within BWI76_RS15255at 3197.481 kb on + strand, within BWI76_RS15255at 3197.516 kb on + strand, within BWI76_RS15255at 3197.555 kb on + strand, within BWI76_RS15255at 3197.563 kb on - strand, within BWI76_RS15255at 3197.605 kb on + strand, within BWI76_RS15255at 3197.695 kb on + strand, within BWI76_RS15255at 3198.582 kb on + strand, within BWI76_RS15260at 3199.228 kb on - strand, within BWI76_RS15265

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Per-strain Table

Position Strand Gene LocusTag Fraction LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL
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3,196,173 - -0.2
3,196,173 - -2.2
3,196,186 + +2.2
3,196,191 + +0.7
3,196,194 - -0.1
3,196,197 + +0.9
3,196,198 + -0.7
3,196,199 - +1.0
3,196,204 + +0.5
3,196,205 - -0.8
3,196,205 - +0.0
3,196,205 - -1.2
3,196,212 - -0.5
3,196,212 - +1.6
3,196,212 - -0.4
3,196,351 + -0.8
3,196,533 + BWI76_RS15250 0.22 -1.2
3,197,100 + +1.3
3,197,199 + +1.2
3,197,205 + -0.8
3,197,213 - +1.2
3,197,224 + +0.1
3,197,232 + +1.0
3,197,232 + -0.0
3,197,237 + -0.2
3,197,293 - -0.4
3,197,361 + BWI76_RS15255 0.17 -0.4
3,197,373 + BWI76_RS15255 0.18 +0.8
3,197,457 + BWI76_RS15255 0.25 -2.2
3,197,481 + BWI76_RS15255 0.28 +2.2
3,197,516 + BWI76_RS15255 0.31 +0.2
3,197,555 + BWI76_RS15255 0.34 +1.5
3,197,563 - BWI76_RS15255 0.35 +1.7
3,197,605 + BWI76_RS15255 0.38 +0.9
3,197,695 + BWI76_RS15255 0.46 +0.9
3,198,582 + BWI76_RS15260 0.54 -0.2
3,199,228 - BWI76_RS15265 0.32 +0.5

Or see this region's nucleotide sequence