Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS14550
Experiment: LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL |
---|---|---|---|---|---|
remove | |||||
3,052,830 | + | -1.6 | |||
3,052,914 | + | BWI76_RS14545 | 0.18 | +0.1 | |
3,052,948 | + | BWI76_RS14545 | 0.22 | +0.2 | |
3,053,344 | + | BWI76_RS14545 | 0.71 | +0.1 | |
3,053,384 | - | BWI76_RS14545 | 0.76 | -0.3 | |
3,053,562 | + | +0.3 | |||
3,054,132 | - | BWI76_RS14550 | 0.35 | -1.1 | |
3,054,161 | - | BWI76_RS14550 | 0.37 | +1.1 | |
3,054,198 | + | BWI76_RS14550 | 0.39 | +0.1 | |
3,054,216 | - | BWI76_RS14550 | 0.40 | +0.9 | |
3,054,294 | - | BWI76_RS14550 | 0.45 | +0.6 | |
3,054,327 | - | BWI76_RS14550 | 0.48 | +0.0 | |
3,054,409 | - | BWI76_RS14550 | 0.53 | +0.6 | |
3,054,475 | + | BWI76_RS14550 | 0.57 | +0.8 | |
3,054,693 | + | BWI76_RS14550 | 0.71 | +1.8 | |
3,054,723 | + | BWI76_RS14550 | 0.73 | +0.2 | |
3,054,999 | - | +0.2 | |||
3,055,463 | - | -0.2 | |||
3,055,500 | + | BWI76_RS14555 | 0.11 | +1.2 | |
3,055,605 | - | BWI76_RS14555 | 0.16 | -1.9 | |
3,055,667 | - | BWI76_RS14555 | 0.19 | +1.4 | |
3,056,098 | - | BWI76_RS14555 | 0.40 | +1.4 |
Or see this region's nucleotide sequence