Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS12870
Experiment: LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL |
---|---|---|---|---|---|
remove | |||||
2,681,110 | - | BWI76_RS12865 | 0.22 | +0.2 | |
2,681,268 | + | BWI76_RS12865 | 0.35 | +0.4 | |
2,681,368 | - | BWI76_RS12865 | 0.44 | -2.0 | |
2,681,368 | - | BWI76_RS12865 | 0.44 | +0.4 | |
2,681,518 | - | BWI76_RS12865 | 0.57 | -2.4 | |
2,681,906 | + | -0.1 | |||
2,681,921 | - | -0.2 | |||
2,682,117 | + | +2.0 | |||
2,682,117 | + | -1.5 | |||
2,682,205 | - | BWI76_RS12870 | 0.19 | +0.8 | |
2,682,302 | + | BWI76_RS12870 | 0.31 | -1.9 | |
2,682,418 | + | BWI76_RS12870 | 0.46 | -1.3 | |
2,682,797 | + | +0.4 | |||
2,682,911 | + | -1.3 | |||
2,683,019 | + | -1.8 | |||
2,683,148 | - | BWI76_RS12875 | 0.24 | -0.5 | |
2,683,188 | + | BWI76_RS12875 | 0.31 | -0.8 | |
2,683,225 | - | BWI76_RS12875 | 0.38 | +1.5 | |
2,683,379 | - | BWI76_RS12875 | 0.67 | -0.1 | |
2,683,526 | - | -0.2 | |||
2,683,568 | + | -0.5 | |||
2,683,573 | - | -1.6 | |||
2,683,576 | - | +0.2 | |||
2,683,612 | - | +0.3 | |||
2,683,663 | + | -1.0 | |||
2,683,700 | + | +0.5 | |||
2,683,713 | - | +0.2 | |||
2,683,725 | + | -2.1 | |||
2,683,791 | - | BWI76_RS12880 | 0.14 | +1.8 | |
2,683,801 | - | BWI76_RS12880 | 0.15 | -2.8 | |
2,683,811 | - | BWI76_RS12880 | 0.16 | -1.8 |
Or see this region's nucleotide sequence