Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS09875
Experiment: LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL |
---|---|---|---|---|---|
remove | |||||
2,073,464 | - | BWI76_RS09870 | 0.54 | -0.6 | |
2,073,577 | + | BWI76_RS09870 | 0.64 | +0.7 | |
2,073,605 | + | BWI76_RS09870 | 0.66 | +0.1 | |
2,073,769 | + | BWI76_RS09870 | 0.80 | -0.7 | |
2,073,866 | + | BWI76_RS09870 | 0.88 | +1.2 | |
2,073,874 | - | BWI76_RS09870 | 0.89 | +4.4 | |
2,073,874 | - | BWI76_RS09870 | 0.89 | +0.1 | |
2,073,874 | - | BWI76_RS09870 | 0.89 | +0.5 | |
2,073,879 | + | BWI76_RS09870 | 0.89 | +0.3 | |
2,073,995 | - | +0.1 | |||
2,074,455 | - | BWI76_RS09875 | 0.24 | -0.3 | |
2,074,528 | + | BWI76_RS09875 | 0.31 | -0.3 | |
2,074,544 | - | BWI76_RS09875 | 0.32 | -0.5 | |
2,074,557 | - | BWI76_RS09875 | 0.34 | +0.9 | |
2,074,557 | - | BWI76_RS09875 | 0.34 | +0.3 | |
2,074,672 | - | BWI76_RS09875 | 0.44 | -2.8 | |
2,074,845 | - | BWI76_RS09875 | 0.60 | +0.1 | |
2,074,857 | + | BWI76_RS09875 | 0.61 | -2.4 | |
2,074,865 | - | BWI76_RS09875 | 0.62 | -0.1 | |
2,075,040 | - | BWI76_RS09875 | 0.78 | +0.0 | |
2,075,401 | + | -0.7 | |||
2,075,409 | - | +0.4 | |||
2,075,751 | + | -1.5 |
Or see this region's nucleotide sequence