Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS07165
Experiment: LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL |
---|---|---|---|---|---|
remove | |||||
1,504,587 | + | +0.2 | |||
1,504,587 | + | -2.6 | |||
1,504,633 | + | +0.3 | |||
1,504,660 | - | -1.0 | |||
1,504,675 | + | -0.4 | |||
1,504,700 | + | +0.4 | |||
1,504,712 | + | -0.3 | |||
1,504,720 | - | -0.7 | |||
1,504,799 | + | BWI76_RS07160 | 0.17 | -0.5 | |
1,504,802 | - | BWI76_RS07160 | 0.17 | -0.6 | |
1,504,802 | - | BWI76_RS07160 | 0.17 | +0.2 | |
1,504,941 | - | BWI76_RS07160 | 0.34 | -1.4 | |
1,505,289 | + | BWI76_RS07160 | 0.76 | +1.2 | |
1,505,831 | - | BWI76_RS07165 | 0.61 | +1.0 | |
1,505,861 | + | BWI76_RS07165 | 0.67 | +0.6 | |
1,506,224 | - | +0.0 | |||
1,506,570 | + | BWI76_RS07170 | 0.45 | -1.0 | |
1,506,685 | + | BWI76_RS07170 | 0.58 | +0.9 | |
1,506,786 | - | -0.8 | |||
1,506,791 | - | BWI76_RS07170 | 0.70 | +0.3 | |
1,506,831 | - | BWI76_RS07170 | 0.74 | +0.4 | |
1,506,845 | - | BWI76_RS07170 | 0.76 | -0.8 | |
1,506,866 | - | BWI76_RS07170 | 0.78 | -0.8 | |
1,506,945 | + | BWI76_RS07170 | 0.87 | -0.3 | |
1,507,002 | - | +0.6 |
Or see this region's nucleotide sequence