Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS01795

Experiment: LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS01790 and BWI76_RS01795 are separated by 121 nucleotidesBWI76_RS01795 and BWI76_RS01800 are separated by 282 nucleotides BWI76_RS01790: BWI76_RS01790 - lysine-sensitive aspartokinase 3, at 365,131 to 366,480 _RS01790 BWI76_RS01795: BWI76_RS01795 - hypothetical protein, at 366,602 to 366,964 _RS01795 BWI76_RS01800: BWI76_RS01800 - glucose-6-phosphate isomerase, at 367,247 to 368,896 _RS01800 Position (kb) 366 367Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 365.661 kb on + strand, within BWI76_RS01790at 365.689 kb on - strand, within BWI76_RS01790at 365.694 kb on - strand, within BWI76_RS01790at 365.790 kb on + strand, within BWI76_RS01790at 365.860 kb on - strand, within BWI76_RS01790at 365.908 kb on + strand, within BWI76_RS01790at 365.916 kb on - strand, within BWI76_RS01790at 365.916 kb on - strand, within BWI76_RS01790at 366.119 kb on - strand, within BWI76_RS01790at 366.166 kb on + strand, within BWI76_RS01790at 366.234 kb on + strand, within BWI76_RS01790at 366.242 kb on - strand, within BWI76_RS01790at 366.253 kb on + strand, within BWI76_RS01790at 366.418 kb on + strandat 366.663 kb on + strand, within BWI76_RS01795at 366.681 kb on + strand, within BWI76_RS01795at 366.801 kb on + strand, within BWI76_RS01795at 366.931 kb on + strandat 366.938 kb on - strandat 366.990 kb on - strandat 367.238 kb on + strandat 367.265 kb on + strandat 367.443 kb on - strand, within BWI76_RS01800at 367.532 kb on + strand, within BWI76_RS01800at 367.566 kb on - strand, within BWI76_RS01800at 367.772 kb on - strand, within BWI76_RS01800

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Per-strain Table

Position Strand Gene LocusTag Fraction LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL
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365,661 + BWI76_RS01790 0.39 -0.5
365,689 - BWI76_RS01790 0.41 -0.1
365,694 - BWI76_RS01790 0.42 -3.2
365,790 + BWI76_RS01790 0.49 +0.1
365,860 - BWI76_RS01790 0.54 +1.4
365,908 + BWI76_RS01790 0.58 -0.5
365,916 - BWI76_RS01790 0.58 +0.3
365,916 - BWI76_RS01790 0.58 +0.6
366,119 - BWI76_RS01790 0.73 +1.0
366,166 + BWI76_RS01790 0.77 -1.6
366,234 + BWI76_RS01790 0.82 -0.7
366,242 - BWI76_RS01790 0.82 +0.0
366,253 + BWI76_RS01790 0.83 -0.9
366,418 + +0.5
366,663 + BWI76_RS01795 0.17 +0.5
366,681 + BWI76_RS01795 0.22 +0.5
366,801 + BWI76_RS01795 0.55 +3.0
366,931 + -0.5
366,938 - -0.9
366,990 - +0.4
367,238 + -1.3
367,265 + -0.1
367,443 - BWI76_RS01800 0.12 -0.1
367,532 + BWI76_RS01800 0.17 +0.4
367,566 - BWI76_RS01800 0.19 +1.4
367,772 - BWI76_RS01800 0.32 -1.6

Or see this region's nucleotide sequence