Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS17675
Experiment: LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL |
---|---|---|---|---|---|
remove | |||||
3,670,295 | + | -0.1 | |||
3,670,295 | + | -0.0 | |||
3,670,366 | - | BWI76_RS17670 | 0.13 | -0.2 | |
3,670,908 | + | BWI76_RS17670 | 0.79 | -0.0 | |
3,670,950 | + | BWI76_RS17670 | 0.85 | +0.2 | |
3,671,105 | + | +0.5 | |||
3,671,377 | - | BWI76_RS17675 | 0.33 | -0.7 | |
3,671,538 | - | BWI76_RS17675 | 0.50 | +0.7 | |
3,671,694 | - | BWI76_RS17675 | 0.67 | -1.9 | |
3,671,967 | + | -1.0 | |||
3,672,191 | - | BWI76_RS17680 | 0.14 | -0.0 | |
3,672,268 | - | BWI76_RS17680 | 0.19 | +0.7 | |
3,672,342 | + | BWI76_RS17680 | 0.24 | +0.3 | |
3,672,350 | - | BWI76_RS17680 | 0.25 | -0.8 | |
3,672,429 | + | BWI76_RS17680 | 0.30 | +0.8 | |
3,672,453 | + | BWI76_RS17680 | 0.32 | +1.9 | |
3,672,465 | - | BWI76_RS17680 | 0.33 | +0.9 | |
3,672,657 | - | BWI76_RS17680 | 0.46 | +0.3 | |
3,672,657 | - | BWI76_RS17680 | 0.46 | +0.8 | |
3,672,704 | - | BWI76_RS17680 | 0.49 | -0.5 | |
3,672,745 | + | BWI76_RS17680 | 0.52 | -0.3 | |
3,672,843 | + | BWI76_RS17680 | 0.59 | +0.6 | |
3,672,843 | + | BWI76_RS17680 | 0.59 | -1.3 | |
3,672,848 | + | BWI76_RS17680 | 0.59 | +0.1 | |
3,672,856 | - | BWI76_RS17680 | 0.60 | +0.5 |
Or see this region's nucleotide sequence