Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS12070
Experiment: LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL |
---|---|---|---|---|---|
remove | |||||
2,536,370 | - | BWI76_RS12060 | 0.78 | -0.4 | |
2,536,511 | + | BWI76_RS12060 | 0.83 | -0.1 | |
2,536,519 | - | BWI76_RS12060 | 0.83 | -1.0 | |
2,536,519 | - | BWI76_RS12060 | 0.83 | +0.6 | |
2,536,565 | + | BWI76_RS12060 | 0.85 | -0.8 | |
2,536,573 | - | BWI76_RS12060 | 0.85 | +0.4 | |
2,536,573 | - | BWI76_RS12060 | 0.85 | +0.3 | |
2,536,613 | - | BWI76_RS12060 | 0.87 | -0.1 | |
2,536,620 | - | BWI76_RS12060 | 0.87 | -0.9 | |
2,536,883 | + | -0.1 | |||
2,536,958 | + | -0.2 | |||
2,537,032 | + | -0.1 | |||
2,537,040 | - | +0.7 | |||
2,537,174 | + | +0.8 | |||
2,537,179 | + | +0.4 | |||
2,537,219 | + | BWI76_RS12065 | 0.22 | -0.1 | |
2,537,242 | + | BWI76_RS12065 | 0.34 | +0.7 | |
2,537,289 | + | BWI76_RS12065 | 0.59 | -0.7 | |
2,537,295 | - | BWI76_RS12065 | 0.62 | +0.2 | |
2,537,528 | - | BWI76_RS12070 | 0.83 | -1.8 | |
2,537,559 | - | +0.3 | |||
2,537,608 | + | -0.6 | |||
2,537,697 | + | +0.5 |
Or see this region's nucleotide sequence