Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS06420
Experiment: LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL |
|---|---|---|---|---|---|
| remove | |||||
| 1,348,581 | - | BWI76_RS06415 | 0.75 | +1.0 | |
| 1,348,583 | - | BWI76_RS06415 | 0.76 | -1.5 | |
| 1,348,731 | + | BWI76_RS06415 | 0.86 | -0.0 | |
| 1,348,787 | + | +0.4 | |||
| 1,348,787 | + | -3.3 | |||
| 1,348,795 | - | -0.1 | |||
| 1,348,952 | - | +0.2 | |||
| 1,349,054 | + | +0.3 | |||
| 1,349,062 | - | +0.6 | |||
| 1,349,127 | + | +0.1 | |||
| 1,349,364 | - | BWI76_RS06420 | 0.25 | +0.4 | |
| 1,349,387 | - | BWI76_RS06420 | 0.27 | +0.6 | |
| 1,349,455 | + | BWI76_RS06420 | 0.33 | +0.8 | |
| 1,349,463 | - | BWI76_RS06420 | 0.33 | +0.3 | |
| 1,349,497 | + | BWI76_RS06420 | 0.36 | +1.2 | |
| 1,349,511 | + | BWI76_RS06420 | 0.37 | +1.6 | |
| 1,349,638 | + | BWI76_RS06420 | 0.48 | -1.0 | |
| 1,350,060 | - | BWI76_RS06420 | 0.84 | -0.1 | |
| 1,350,194 | + | +0.2 | |||
| 1,350,223 | + | +0.4 | |||
| 1,350,223 | + | +0.2 | |||
| 1,350,367 | - | +0.2 | |||
| 1,350,578 | - | BWI76_RS06425 | 0.17 | -1.5 | |
| 1,350,686 | - | BWI76_RS06425 | 0.25 | +0.2 | |
| 1,350,809 | + | BWI76_RS06425 | 0.33 | +0.2 | |
| 1,350,817 | - | BWI76_RS06425 | 0.34 | -1.2 | |
| 1,350,995 | - | BWI76_RS06425 | 0.47 | +0.7 | |
| 1,351,164 | - | BWI76_RS06425 | 0.59 | -0.0 | |
| 1,351,189 | + | BWI76_RS06425 | 0.60 | +0.9 |
Or see this region's nucleotide sequence