Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS05120

Experiment: LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL
1,072,308	-				-1.0
1,072,308	-				-0.2
1,072,308	-				-0.3
1,072,308	-				-0.0
1,072,308	-				-1.0
1,072,311	+				+0.8
1,072,321	+				+1.2
1,072,321	+				+0.7
1,072,321	+				+0.1
1,072,321	+				-3.0
1,072,321	+				+0.1
1,072,321	+				-0.3
1,072,329	-				-0.2
1,072,329	-				+1.6
1,072,329	-				+0.8
1,072,365	-				-0.5
1,072,365	-				-1.1
1,072,378	+				-0.0
1,072,398	+		BWI76_RS05110	0.11	-3.6
1,072,412	+		BWI76_RS05110	0.15	-0.0
1,072,423	+		BWI76_RS05110	0.18	+1.4
1,072,431	+		BWI76_RS05110	0.20	-1.3
1,072,431	+		BWI76_RS05110	0.20	+0.3
1,072,431	+		BWI76_RS05110	0.20	+0.6
1,072,431	+		BWI76_RS05110	0.20	-0.6
1,072,436	+		BWI76_RS05110	0.21	-0.1
1,072,436	+		BWI76_RS05110	0.21	+0.9
1,072,439	-		BWI76_RS05110	0.22	+1.3
1,072,439	-		BWI76_RS05110	0.22	-0.8
1,072,439	-		BWI76_RS05110	0.22	+1.0
1,072,439	-		BWI76_RS05110	0.22	-1.6
1,072,439	-		BWI76_RS05110	0.22	-0.0
1,072,448	-		BWI76_RS05110	0.25	+0.1
1,072,467	-		BWI76_RS05110	0.30	+0.2
1,072,469	+		BWI76_RS05110	0.30	-0.0
1,072,472	-		BWI76_RS05110	0.31	-1.0
1,072,474	+		BWI76_RS05110	0.31	+0.3
1,072,477	-		BWI76_RS05110	0.32	-0.2
1,072,505	+		BWI76_RS05110	0.40	-1.4
1,072,523	+		BWI76_RS05110	0.44	+0.5
1,072,536	+		BWI76_RS05110	0.48	+0.5
1,072,536	+		BWI76_RS05110	0.48	-0.6
1,072,536	+		BWI76_RS05110	0.48	-0.6
1,072,546	-		BWI76_RS05110	0.51	-2.3
1,072,561	-		BWI76_RS05110	0.54	-1.0
1,072,564	-		BWI76_RS05110	0.55	-0.5
1,072,566	-		BWI76_RS05110	0.56	+0.5
1,072,569	+		BWI76_RS05110	0.57	+0.1
1,072,575	+		BWI76_RS05110	0.58	-0.0
1,072,577	+		BWI76_RS05110	0.59	+0.5
1,072,611	+		BWI76_RS05110	0.68	+0.7
1,072,621	+		BWI76_RS05110	0.70	-1.8
1,072,621	+				+1.0
1,072,621	+		BWI76_RS05110	0.70	-1.0
1,072,621	+		BWI76_RS05110	0.70	+0.1
1,072,621	+		BWI76_RS05110	0.70	+1.0
1,072,621	+		BWI76_RS05110	0.70	-0.6
1,072,621	+		BWI76_RS05110	0.70	-1.2
1,072,626	+		BWI76_RS05110	0.72	-0.6
1,072,626	+		BWI76_RS05110	0.72	+0.0
1,072,626	+		BWI76_RS05110	0.72	-0.3
1,072,626	+		BWI76_RS05110	0.72	-0.3
1,072,626	+		BWI76_RS05110	0.72	+0.5
1,072,629	-		BWI76_RS05110	0.72	-1.3
1,072,629	-		BWI76_RS05110	0.72	+0.0
1,072,629	-		BWI76_RS05110	0.72	+0.4
1,072,629	-		BWI76_RS05110	0.72	+0.5
1,072,634	-		BWI76_RS05110	0.74	-0.3
1,072,634	-		BWI76_RS05110	0.74	+1.6
1,072,634	-		BWI76_RS05110	0.74	+1.6
1,072,634	-		BWI76_RS05110	0.74	-1.6
1,072,638	-		BWI76_RS05110	0.75	+0.7
1,072,638	-		BWI76_RS05110	0.75	+1.7
1,072,645	+		BWI76_RS05110	0.77	+1.2
1,072,645	+		BWI76_RS05110	0.77	-1.3
1,072,645	+		BWI76_RS05110	0.77	+1.3
1,072,645	+		BWI76_RS05110	0.77	+0.3
1,072,645	+		BWI76_RS05110	0.77	-0.0
1,072,645	+		BWI76_RS05110	0.77	-0.9
1,072,648	-		BWI76_RS05110	0.78	+0.3
1,072,650	+		BWI76_RS05110	0.78	+0.1
1,072,651	+		BWI76_RS05110	0.78	+0.3
1,072,651	+		BWI76_RS05110	0.78	+0.5
1,072,651	+		BWI76_RS05110	0.78	-0.3
1,072,652	+		BWI76_RS05110	0.79	-0.1
1,072,653	-		BWI76_RS05110	0.79	+0.8
1,072,653	-		BWI76_RS05110	0.79	+0.4
1,072,653	-		BWI76_RS05110	0.79	-0.3
1,072,658	-		BWI76_RS05110	0.80	+1.0
1,072,658	-		BWI76_RS05110	0.80	+2.0
1,072,659	+		BWI76_RS05110	0.80	+1.0
1,072,683	+		BWI76_RS05110	0.87	-0.4
1,072,683	+				-0.6
1,072,683	+		BWI76_RS05110	0.87	+1.0
1,072,683	+				-0.0
1,072,683	+		BWI76_RS05110	0.87	+0.2
1,072,691	-		BWI76_RS05110	0.89	-1.5
1,072,691	-		BWI76_RS05110	0.89	+0.1
1,072,691	-		BWI76_RS05110	0.89	-0.0
1,072,691	-		BWI76_RS05110	0.89	-1.5
1,072,691	-		BWI76_RS05110	0.89	-0.9
1,072,691	-		BWI76_RS05110	0.89	+0.3
1,072,691	-		BWI76_RS05110	0.89	-1.1
1,072,691	-		BWI76_RS05110	0.89	-0.0
1,072,691	-		BWI76_RS05110	0.89	-2.8
1,072,691	-		BWI76_RS05110	0.89	-1.6
1,072,691	-		BWI76_RS05110	0.89	+2.1
1,072,691	-		BWI76_RS05110	0.89	+1.9
1,072,691	-		BWI76_RS05110	0.89	+1.0
1,072,691	-		BWI76_RS05110	0.89	-0.7
1,072,691	-		BWI76_RS05110	0.89	+2.0
1,072,693	+		BWI76_RS05110	0.89	-1.0
1,072,698	+				-0.0
1,072,698	+				-0.4
1,072,701	-				-0.4
1,072,701	-				-1.0
1,072,717	+				-0.3
1,072,775	+				+0.1
1,072,815	+				-0.6
1,072,815	+				-1.0
1,072,815	+				+0.7
1,072,815	+				+0.4
1,072,815	+				+0.1
1,072,823	-				+0.1
1,072,918	+				-0.2
1,072,941	+				+1.6
1,072,941	+				+0.1
1,072,949	+				+0.5
1,072,949	-				+1.7
1,072,957	-				-2.6
1,073,005	+		BWI76_RS05115	0.23	-0.6
1,073,006	+		BWI76_RS05115	0.24	-0.9
1,073,011	-		BWI76_RS05115	0.27	-2.0
1,073,027	+		BWI76_RS05115	0.36	-0.3
1,073,027	+				-0.6
1,073,035	-		BWI76_RS05115	0.40	+0.5
1,073,035	-		BWI76_RS05115	0.40	+1.0
1,073,035	-		BWI76_RS05115	0.40	-1.8
1,073,042	+		BWI76_RS05115	0.44	-0.0
1,073,043	+		BWI76_RS05115	0.44	-0.6
1,073,043	+		BWI76_RS05115	0.44	+2.6
1,073,043	+		BWI76_RS05115	0.44	+0.1
1,073,043	+		BWI76_RS05115	0.44	-1.1
1,073,043	+		BWI76_RS05115	0.44	-0.3
1,073,043	+		BWI76_RS05115	0.44	-0.2
1,073,043	+		BWI76_RS05115	0.44	+1.7
1,073,043	+		BWI76_RS05115	0.44	-0.9
1,073,043	+		BWI76_RS05115	0.44	-0.5
1,073,043	+		BWI76_RS05115	0.44	-0.8
1,073,048	+		BWI76_RS05115	0.47	-0.6
1,073,048	+		BWI76_RS05115	0.47	+0.2
1,073,048	+		BWI76_RS05115	0.47	-0.4
1,073,048	+		BWI76_RS05115	0.47	+1.0
1,073,051	-		BWI76_RS05115	0.49	-0.6
1,073,051	-		BWI76_RS05115	0.49	-1.3
1,073,051	-		BWI76_RS05115	0.49	-1.0
1,073,051	-		BWI76_RS05115	0.49	-1.4
1,073,051	-				-0.0
1,073,051	-		BWI76_RS05115	0.49	-1.7
1,073,051	-		BWI76_RS05115	0.49	-1.5
1,073,053	+		BWI76_RS05115	0.50	-2.3
1,073,053	+		BWI76_RS05115	0.50	-0.6
1,073,053	+		BWI76_RS05115	0.50	-0.4
1,073,053	+		BWI76_RS05115	0.50	-0.4
1,073,053	+		BWI76_RS05115	0.50	+1.0
1,073,053	+		BWI76_RS05115	0.50	-1.0
1,073,055	+		BWI76_RS05115	0.51	+1.2
1,073,056	-		BWI76_RS05115	0.52	+1.5
1,073,061	-		BWI76_RS05115	0.54	-0.0
1,073,061	-		BWI76_RS05115	0.54	-1.3
1,073,061	-		BWI76_RS05115	0.54	+0.9
1,073,076	+		BWI76_RS05115	0.63	-0.1
1,073,083	+		BWI76_RS05115	0.67	+0.0
1,073,088	+		BWI76_RS05115	0.69	-1.2
1,073,091	+		BWI76_RS05115	0.71	-0.0
1,073,096	-		BWI76_RS05115	0.74	-0.4
1,073,096	-		BWI76_RS05115	0.74	-0.8
1,073,107	+		BWI76_RS05115	0.80	-0.5
1,073,182	+				-0.6
1,073,182	+				+0.1
1,073,182	+				-0.2
1,073,182	+				-0.6
1,073,182	+				+0.8
1,073,190	-				+1.6
1,073,250	+				+0.2
1,073,290	-				-0.6
1,073,290	-				-6.0
1,073,339	+				-1.6
1,073,341	-				-1.6
1,073,363	+				-0.6
1,073,393	-				+1.0
1,073,393	-				-3.7
1,073,397	+				-1.3
1,073,519	-				-2.2
1,073,525	-				-4.3
1,073,620	+		BWI76_RS05120	0.12	-1.8
1,073,685	+		BWI76_RS05120	0.15	-2.2
1,073,693	-		BWI76_RS05120	0.15	-2.7
1,073,712	-		BWI76_RS05120	0.16	-3.7
1,073,743	+		BWI76_RS05120	0.17	-3.7
1,073,801	-		BWI76_RS05120	0.19	-1.3
1,073,826	-		BWI76_RS05120	0.20	-1.0
1,073,826	-		BWI76_RS05120	0.20	-2.5
1,073,849	-		BWI76_RS05120	0.21	-3.2
1,074,165	+		BWI76_RS05120	0.34	-2.8
1,074,340	-		BWI76_RS05120	0.40	-3.7
1,074,371	-		BWI76_RS05120	0.42	-1.0
1,074,511	-		BWI76_RS05120	0.47	-2.0
1,074,760	-		BWI76_RS05120	0.57	-4.5
1,074,801	-		BWI76_RS05120	0.59	-3.3
1,074,942	+		BWI76_RS05120	0.64	-1.6
1,075,051	+		BWI76_RS05120	0.68	-2.1
1,075,082	+		BWI76_RS05120	0.70	-2.3
1,075,288	+		BWI76_RS05120	0.78	-4.1
1,075,428	-		BWI76_RS05120	0.83	-1.0
1,075,498	+		BWI76_RS05120	0.86	-3.3
1,075,511	-		BWI76_RS05120	0.86	-3.1
1,075,604	-		BWI76_RS05120	0.90	+0.1
1,075,659	+				-0.3
1,075,814	-				+0.5
1,075,832	+				-0.0
1,075,840	-				-0.1
1,075,845	+				-0.1
1,075,867	+				-1.6
1,075,867	+				-0.0
1,075,935	+				+0.6
1,075,990	-				+0.3
1,076,047	-				+2.0
1,076,140	-				+0.7
1,076,143	+				-1.6
1,076,143	+				-0.6
1,076,143	+				-1.0
1,076,151	-				-0.7
1,076,151	-				-0.2
1,076,151	-				+0.2
1,076,230	+				+0.4
1,076,281	-				-0.6
1,076,290	-				+0.0
1,076,453	-		BWI76_RS05125	0.14	-0.4
1,076,522	-		BWI76_RS05125	0.18	+0.8
1,076,528	-		BWI76_RS05125	0.18	-0.4
1,076,530	+		BWI76_RS05125	0.18	+1.0
1,076,616	+		BWI76_RS05125	0.22	+1.0
1,076,640	+		BWI76_RS05125	0.23	-0.6
1,076,664	+		BWI76_RS05125	0.24	+1.3