Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS01105
Experiment: LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL |
---|---|---|---|---|---|
remove | |||||
226,918 | + | -0.9 | |||
226,979 | + | BWI76_RS01100 | 0.15 | -0.2 | |
227,132 | + | BWI76_RS01100 | 0.29 | -0.1 | |
227,132 | + | BWI76_RS01100 | 0.29 | -0.2 | |
227,132 | + | BWI76_RS01100 | 0.29 | +1.1 | |
227,140 | - | BWI76_RS01100 | 0.30 | -1.9 | |
227,142 | + | BWI76_RS01100 | 0.30 | -0.2 | |
227,227 | + | BWI76_RS01100 | 0.38 | +0.1 | |
227,235 | - | BWI76_RS01100 | 0.39 | -1.2 | |
227,642 | - | BWI76_RS01100 | 0.77 | -2.5 | |
227,921 | - | -0.8 | |||
228,196 | - | BWI76_RS01105 | 0.33 | -2.3 | |
228,249 | + | BWI76_RS01105 | 0.39 | -0.3 | |
228,263 | - | BWI76_RS01105 | 0.40 | -1.2 | |
228,273 | - | BWI76_RS01105 | 0.42 | -2.2 | |
228,384 | + | BWI76_RS01105 | 0.54 | -1.0 | |
228,654 | + | BWI76_RS01105 | 0.85 | -1.2 | |
228,789 | - | -3.2 | |||
228,839 | - | BWI76_RS01110 | 0.11 | -1.4 | |
228,927 | + | BWI76_RS01110 | 0.24 | +1.1 | |
229,276 | - | BWI76_RS01110 | 0.76 | -2.0 | |
229,279 | + | BWI76_RS01110 | 0.76 | -2.6 | |
229,315 | + | BWI76_RS01110 | 0.81 | -4.3 | |
229,536 | - | -3.3 | |||
229,602 | + | BWI76_RS01115 | 0.14 | -2.7 | |
229,711 | - | BWI76_RS01115 | 0.24 | -0.4 | |
229,716 | - | BWI76_RS01115 | 0.24 | -1.3 |
Or see this region's nucleotide sequence