Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS01090
Experiment: LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL |
---|---|---|---|---|---|
remove | |||||
223,438 | + | BWI76_RS01085 | 0.10 | +0.0 | |
223,608 | + | BWI76_RS01085 | 0.27 | +1.1 | |
223,697 | + | BWI76_RS01085 | 0.35 | +0.0 | |
223,917 | + | BWI76_RS01085 | 0.56 | +0.1 | |
224,006 | + | BWI76_RS01085 | 0.65 | -0.6 | |
224,069 | + | BWI76_RS01085 | 0.71 | -1.2 | |
224,097 | + | BWI76_RS01085 | 0.73 | +2.1 | |
224,119 | - | BWI76_RS01085 | 0.75 | -1.5 | |
224,184 | - | BWI76_RS01085 | 0.82 | -1.5 | |
224,637 | - | BWI76_RS01090 | 0.18 | +1.1 | |
224,826 | - | BWI76_RS01090 | 0.35 | -4.0 | |
224,859 | + | BWI76_RS01090 | 0.38 | -2.1 | |
225,000 | - | BWI76_RS01090 | 0.50 | -3.6 | |
225,010 | + | BWI76_RS01090 | 0.51 | -1.2 | |
225,020 | + | BWI76_RS01090 | 0.52 | -3.4 | |
225,502 | + | -3.1 | |||
225,589 | + | -0.2 | |||
226,034 | - | BWI76_RS01095 | 0.38 | -2.0 | |
226,533 | + | BWI76_RS01095 | 0.77 | -2.5 | |
226,541 | - | BWI76_RS01095 | 0.78 | -2.0 |
Or see this region's nucleotide sequence