Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS12435

Experiment: Glucose (C) and Ammonium chloride (N); with TAPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glucose (C) and Ammonium chloride (N); with TAPS
2,754,678	-		PFLU_RS12425	0.20	-0.3
2,754,797	+		PFLU_RS12425	0.53	-0.3
2,754,797	+		PFLU_RS12425	0.53	-2.4
2,754,797	+		PFLU_RS12425	0.53	+1.5
2,754,797	+		PFLU_RS12425	0.53	-0.1
2,754,797	+		PFLU_RS12425	0.53	+0.6
2,754,797	+		PFLU_RS12425	0.53	+1.5
2,754,797	+		PFLU_RS12425	0.53	+1.5
2,754,797	+		PFLU_RS12425	0.53	+1.1
2,754,798	-		PFLU_RS12425	0.53	-0.9
2,754,798	-		PFLU_RS12425	0.53	-0.5
2,754,798	-		PFLU_RS12425	0.53	+2.3
2,754,798	-		PFLU_RS12425	0.53	+1.2
2,754,798	-		PFLU_RS12425	0.53	+1.1
2,754,805	+		PFLU_RS12425	0.55	+1.5
2,754,805	+		PFLU_RS12425	0.55	+1.5
2,754,806	-		PFLU_RS12425	0.55	+2.8
2,754,862	+		PFLU_RS12425	0.71	+2.0
2,754,862	+		PFLU_RS12425	0.71	+0.9
2,754,862	+		PFLU_RS12425	0.71	+0.1
2,754,862	+		PFLU_RS12425	0.71	+0.6
2,754,862	+		PFLU_RS12425	0.71	-0.4
2,754,862	+		PFLU_RS12425	0.71	+1.5
2,754,863	-		PFLU_RS12425	0.71	+0.7
2,754,863	-		PFLU_RS12425	0.71	+0.8
2,754,863	-		PFLU_RS12425	0.71	+0.6
2,754,863	-		PFLU_RS12425	0.71	-1.5
2,754,863	-		PFLU_RS12425	0.71	+2.0
2,754,930	-		PFLU_RS12425	0.89	-1.0
2,754,940	+				+1.3
2,754,940	+				+3.3
2,754,940	+				-1.5
2,754,940	+				+1.5
2,754,940	+				+0.5
2,754,940	+				-0.9
2,754,941	-				+1.5
2,754,941	-				-0.1
2,754,941	-				-1.9
2,754,941	-				+0.9
2,754,941	-				+0.2
2,754,941	-				+0.5
2,755,017	+		PFLU_RS12430	0.21	+1.5
2,755,017	+		PFLU_RS12430	0.21	+1.0
2,755,017	+		PFLU_RS12430	0.21	+2.8
2,755,017	+		PFLU_RS12430	0.21	-0.5
2,755,018	-		PFLU_RS12430	0.21	-0.0
2,755,018	-		PFLU_RS12430	0.21	-1.5
2,755,018	-		PFLU_RS12430	0.21	-0.5
2,755,018	-		PFLU_RS12430	0.21	-0.2
2,755,018	-		PFLU_RS12430	0.21	+0.2
2,755,018	-		PFLU_RS12430	0.21	-1.4
2,755,018	-		PFLU_RS12430	0.21	-2.7
2,755,018	-		PFLU_RS12430	0.21	+1.0
2,755,018	-		PFLU_RS12430	0.21	-1.1
2,755,122	+		PFLU_RS12430	0.62	-0.9
2,755,122	+		PFLU_RS12430	0.62	+0.0
2,755,122	+		PFLU_RS12430	0.62	-0.1
2,755,122	+		PFLU_RS12430	0.62	-0.1
2,755,123	-		PFLU_RS12430	0.63	+2.9
2,755,123	-		PFLU_RS12430	0.63	+1.5
2,755,123	-		PFLU_RS12430	0.63	-1.0
2,755,162	+		PFLU_RS12430	0.78	-0.4
2,755,162	+		PFLU_RS12430	0.78	+0.3
2,755,162	+		PFLU_RS12430	0.78	+1.5
2,755,163	-		PFLU_RS12430	0.79	+0.2
2,755,163	-		PFLU_RS12430	0.79	-0.5
2,755,163	-		PFLU_RS12430	0.79	+0.5
2,755,237	-				-1.1
2,755,242	+				-0.1
2,755,271	+				-0.9
2,755,271	+				+0.3
2,755,272	-				+1.9
2,755,272	-				+2.5
2,755,306	+				-0.7
2,755,306	+				-0.1
2,755,306	+				+0.6
2,755,306	+				-1.7
2,755,306	+				+1.5
2,755,307	-				-0.1
2,755,307	-				-0.1
2,755,307	-				+0.2
2,755,307	-				+0.6
2,755,374	-				+1.8
2,755,374	-				+0.3
2,755,374	-				-0.7
2,755,375	+				+0.1
2,755,405	+				+0.0
2,755,405	+				+0.1
2,755,406	-				-0.2
2,755,406	-				-0.9
2,755,406	-				-0.1
2,755,464	+				+0.3
2,755,585	+				-0.5
2,755,586	-				+1.8
2,755,639	+				+0.6
2,755,640	-				-0.4
2,755,640	-				-1.1
2,755,640	-				-0.7
2,756,029	+				-0.1
2,756,029	+				+0.5
2,756,029	+				+0.5
2,756,030	-				+1.5
2,756,030	-				-0.5
2,756,030	-				-1.9
2,756,030	-				+2.0
2,756,083	+				+0.3
2,756,084	-				-0.3
2,756,149	+				-0.5
2,756,227	+				+1.2
2,756,227	+				+1.5
2,756,227	+				-1.0
2,756,316	+				+1.0
2,756,316	+				+2.9
2,756,316	+				-1.4
2,756,316	+				-1.1
2,756,317	-				+0.1
2,756,317	-				+0.5
2,756,317	-				+1.7
2,756,317	-				+0.8
2,756,317	-				-0.4
2,756,317	-				+0.1
2,756,356	+				-0.9
2,756,356	+				-0.5
2,756,357	-				-0.4
2,756,357	-				+0.1
2,756,484	+				+0.8
2,756,598	+				+0.0
2,756,598	+				+0.5
2,756,599	-				+1.5
2,756,620	+				-1.8
2,756,620	+				-1.8
2,756,620	+				+0.7
2,756,620	+				+0.0
2,756,620	+				+0.7
2,756,620	+				-1.0
2,756,620	+				+0.2
2,756,620	+				-0.0
2,756,621	-				-1.1
2,756,621	-				-2.1
2,756,621	-				+1.0
2,756,621	-				+2.8
2,756,621	-				-1.9
2,756,621	-				+1.5
2,756,621	-				-1.4
2,756,621	-				-1.1
2,756,621	-				+1.7
2,756,707	-				+0.7
2,756,773	+				-1.4
2,756,773	+				+0.8
2,756,773	+				+1.5
2,756,774	-				+1.9
2,756,945	-		PFLU_RS12435	0.11	+1.7
2,756,945	-		PFLU_RS12435	0.11	-0.9
2,757,040	+		PFLU_RS12435	0.11	-1.2
2,757,040	+		PFLU_RS12435	0.11	+2.2
2,757,040	+		PFLU_RS12435	0.11	-0.5
2,757,040	+		PFLU_RS12435	0.11	+0.0
2,757,041	-		PFLU_RS12435	0.12	+0.5
2,757,041	-		PFLU_RS12435	0.12	+0.6
2,757,041	-		PFLU_RS12435	0.12	-1.2
2,757,187	+		PFLU_RS12435	0.13	-2.4
2,757,187	+		PFLU_RS12435	0.13	+1.8
2,757,187	+		PFLU_RS12435	0.13	-1.1
2,757,187	+		PFLU_RS12435	0.13	+0.7
2,757,187	+		PFLU_RS12435	0.13	+2.3
2,757,187	+		PFLU_RS12435	0.13	+1.3
2,757,188	-		PFLU_RS12435	0.13	-1.1
2,757,188	-		PFLU_RS12435	0.13	+0.8
2,757,188	-		PFLU_RS12435	0.13	-1.1
2,757,188	-		PFLU_RS12435	0.13	+1.9
2,757,188	-		PFLU_RS12435	0.13	+2.3
2,757,188	-		PFLU_RS12435	0.13	-1.0
2,757,188	-		PFLU_RS12435	0.13	+1.1
2,757,188	-		PFLU_RS12435	0.13	+0.5
2,757,188	-		PFLU_RS12435	0.13	+1.5
2,757,188	-		PFLU_RS12435	0.13	+0.7
2,757,188	-		PFLU_RS12435	0.13	+0.7
2,757,188	-		PFLU_RS12435	0.13	+1.5
2,757,188	-		PFLU_RS12435	0.13	-0.3
2,757,188	-		PFLU_RS12435	0.13	+1.5
2,757,188	-		PFLU_RS12435	0.13	+1.0
2,757,188	-		PFLU_RS12435	0.13	-0.5
2,757,188	-		PFLU_RS12435	0.13	-0.9
2,757,188	-		PFLU_RS12435	0.13	-1.7
2,757,188	-		PFLU_RS12435	0.13	-0.7
2,757,209	-		PFLU_RS12435	0.13	-2.1
2,757,209	-		PFLU_RS12435	0.13	+0.7
2,757,229	+		PFLU_RS12435	0.13	-0.1
2,757,229	+		PFLU_RS12435	0.13	+0.1
2,757,229	+		PFLU_RS12435	0.13	+0.1
2,757,229	+		PFLU_RS12435	0.13	+1.5
2,757,229	+		PFLU_RS12435	0.13	-1.2
2,757,229	+		PFLU_RS12435	0.13	+1.0
2,757,230	-		PFLU_RS12435	0.13	-0.6
2,757,230	-		PFLU_RS12435	0.13	+1.3
2,757,230	-		PFLU_RS12435	0.13	+1.5
2,757,397	+		PFLU_RS12435	0.14	+1.8
2,757,397	+		PFLU_RS12435	0.14	-0.8
2,757,397	+		PFLU_RS12435	0.14	+0.5
2,757,397	+		PFLU_RS12435	0.14	-3.2
2,757,398	-		PFLU_RS12435	0.14	-0.6
2,757,398	-		PFLU_RS12435	0.14	-0.6
2,757,398	-		PFLU_RS12435	0.14	+0.7
2,757,398	-		PFLU_RS12435	0.14	+0.3
2,757,398	-		PFLU_RS12435	0.14	+1.5
2,757,406	+		PFLU_RS12435	0.14	-1.4
2,757,406	+		PFLU_RS12435	0.14	+0.5
2,757,406	+		PFLU_RS12435	0.14	+1.7
2,757,406	+		PFLU_RS12435	0.14	+1.6
2,757,406	+		PFLU_RS12435	0.14	+0.9
2,757,407	-		PFLU_RS12435	0.14	-0.1
2,757,407	-		PFLU_RS12435	0.14	-0.2
2,757,407	-		PFLU_RS12435	0.14	+2.5
2,757,407	-		PFLU_RS12435	0.14	-0.3
2,757,407	-		PFLU_RS12435	0.14	-1.5
2,757,494	-		PFLU_RS12435	0.15	+2.1
2,757,494	-		PFLU_RS12435	0.15	-0.5
2,757,494	-		PFLU_RS12435	0.15	+1.2
2,757,494	-		PFLU_RS12435	0.15	+0.1
2,757,703	-		PFLU_RS12435	0.16	+0.1
2,757,829	+		PFLU_RS12435	0.17	+0.2
2,757,829	+		PFLU_RS12435	0.17	-2.5
2,757,830	-		PFLU_RS12435	0.17	-2.6
2,757,830	-		PFLU_RS12435	0.17	+0.6
2,757,931	+		PFLU_RS12435	0.18	-1.3
2,757,931	+		PFLU_RS12435	0.18	+2.5
2,757,931	+		PFLU_RS12435	0.18	+0.3
2,757,931	+		PFLU_RS12435	0.18	+0.7
2,757,931	+		PFLU_RS12435	0.18	-0.9
2,757,931	+		PFLU_RS12435	0.18	-1.1
2,757,931	+		PFLU_RS12435	0.18	-0.3
2,757,932	-		PFLU_RS12435	0.18	+0.5
2,757,932	-		PFLU_RS12435	0.18	+0.8
2,757,932	-		PFLU_RS12435	0.18	-1.8
2,757,932	-		PFLU_RS12435	0.18	-0.5
2,757,932	-		PFLU_RS12435	0.18	-0.5
2,757,932	-		PFLU_RS12435	0.18	-0.0
2,757,985	+		PFLU_RS12435	0.18	+1.0
2,757,986	-		PFLU_RS12435	0.18	+0.5
2,758,015	+		PFLU_RS12435	0.18	+0.6
2,758,015	+		PFLU_RS12435	0.18	-1.1
2,758,015	+		PFLU_RS12435	0.18	-0.4
2,758,016	-		PFLU_RS12435	0.18	+0.1
2,758,084	+		PFLU_RS12435	0.19	-2.2
2,758,084	+		PFLU_RS12435	0.19	-0.1
2,758,085	-		PFLU_RS12435	0.19	+0.2
2,758,132	+		PFLU_RS12435	0.19	+1.9
2,758,132	+		PFLU_RS12435	0.19	-0.5
2,758,133	-		PFLU_RS12435	0.19	+0.5
2,758,133	-		PFLU_RS12435	0.19	+1.3
2,758,133	-		PFLU_RS12435	0.19	-0.7
2,758,270	+		PFLU_RS12435	0.20	+0.6
2,758,271	-		PFLU_RS12435	0.20	+1.3
2,758,336	+		PFLU_RS12435	0.21	-2.4
2,758,336	+		PFLU_RS12435	0.21	-0.9
2,758,336	+		PFLU_RS12435	0.21	-1.0
2,758,336	+		PFLU_RS12435	0.21	+0.6
2,758,336	+		PFLU_RS12435	0.21	+1.5
2,758,336	+		PFLU_RS12435	0.21	+0.5
2,758,337	-		PFLU_RS12435	0.21	+0.8
2,758,337	-		PFLU_RS12435	0.21	-0.3
2,758,337	-		PFLU_RS12435	0.21	-1.5
2,758,337	-		PFLU_RS12435	0.21	-0.5
2,758,337	-		PFLU_RS12435	0.21	-1.5
2,758,337	-		PFLU_RS12435	0.21	+0.5
2,758,337	-		PFLU_RS12435	0.21	+0.6
2,758,353	+		PFLU_RS12435	0.21	-0.9
2,758,353	+		PFLU_RS12435	0.21	-1.4
2,758,353	+		PFLU_RS12435	0.21	-0.4
2,758,353	+		PFLU_RS12435	0.21	+0.6
2,758,354	-		PFLU_RS12435	0.21	-1.4
2,758,354	-		PFLU_RS12435	0.21	+1.1
2,758,354	-		PFLU_RS12435	0.21	+0.8
2,758,354	-		PFLU_RS12435	0.21	+0.3
2,758,354	-		PFLU_RS12435	0.21	-1.7
2,758,354	-		PFLU_RS12435	0.21	-0.8
2,758,600	-		PFLU_RS12435	0.23	-0.8
2,758,630	+		PFLU_RS12435	0.23	+0.5
2,759,143	+		PFLU_RS12435	0.26	+0.6
2,759,144	-		PFLU_RS12435	0.26	+1.1
2,759,239	+		PFLU_RS12435	0.27	+0.2
2,759,240	-		PFLU_RS12435	0.27	-0.2
2,759,636	-		PFLU_RS12435	0.30	-2.6
2,759,716	+		PFLU_RS12435	0.31	-1.4
2,759,716	+		PFLU_RS12435	0.31	+0.3
2,759,717	-		PFLU_RS12435	0.31	-0.4
2,759,717	-		PFLU_RS12435	0.31	-1.1
2,759,717	-		PFLU_RS12435	0.31	-2.1
2,759,842	+		PFLU_RS12435	0.31	+1.3
2,759,842	+		PFLU_RS12435	0.31	-0.3
2,759,842	+		PFLU_RS12435	0.31	-2.2
2,759,842	+		PFLU_RS12435	0.31	+0.6
2,759,842	+		PFLU_RS12435	0.31	+0.9
2,759,843	-		PFLU_RS12435	0.31	+0.3
2,759,843	-		PFLU_RS12435	0.31	-1.4
2,759,843	-		PFLU_RS12435	0.31	-0.1
2,759,843	-		PFLU_RS12435	0.31	+1.5
2,759,843	-		PFLU_RS12435	0.31	+0.6
2,759,843	-		PFLU_RS12435	0.31	+0.1
2,759,923	+		PFLU_RS12435	0.32	-0.1
2,759,923	+		PFLU_RS12435	0.32	-0.8
2,759,923	+		PFLU_RS12435	0.32	+0.4
2,759,923	+		PFLU_RS12435	0.32	+0.6
2,759,924	-		PFLU_RS12435	0.32	+0.1
2,759,924	-		PFLU_RS12435	0.32	-0.1
2,759,924	-		PFLU_RS12435	0.32	+0.6
2,759,924	-		PFLU_RS12435	0.32	+0.9
2,759,924	-		PFLU_RS12435	0.32	+0.6
2,760,113	-		PFLU_RS12435	0.33	+1.6
2,760,113	-		PFLU_RS12435	0.33	-0.4
2,760,113	-		PFLU_RS12435	0.33	+1.5
2,760,113	-		PFLU_RS12435	0.33	-0.6
2,760,113	-		PFLU_RS12435	0.33	-1.4
2,760,133	+		PFLU_RS12435	0.34	-0.2
2,760,133	+		PFLU_RS12435	0.34	+1.6
2,760,133	+		PFLU_RS12435	0.34	-0.4
2,760,133	+		PFLU_RS12435	0.34	+0.0
2,760,133	+		PFLU_RS12435	0.34	+1.6
2,760,133	+		PFLU_RS12435	0.34	+4.3
2,760,133	+		PFLU_RS12435	0.34	-1.4
2,760,133	+		PFLU_RS12435	0.34	-0.1
2,760,133	+		PFLU_RS12435	0.34	+0.9
2,760,134	-		PFLU_RS12435	0.34	-1.5
2,760,134	-		PFLU_RS12435	0.34	+0.7
2,760,134	-		PFLU_RS12435	0.34	+2.3
2,760,134	-		PFLU_RS12435	0.34	+1.2
2,760,134	-		PFLU_RS12435	0.34	-0.5
2,760,134	-		PFLU_RS12435	0.34	+1.0
2,760,134	-		PFLU_RS12435	0.34	-0.1
2,760,134	-		PFLU_RS12435	0.34	+1.5
2,760,402	-		PFLU_RS12435	0.35	+1.9
2,760,468	+		PFLU_RS12435	0.36	+0.8
2,760,469	-		PFLU_RS12435	0.36	-0.1
2,760,502	+		PFLU_RS12435	0.36	+0.0
2,760,548	-		PFLU_RS12435	0.36	+1.0
2,760,790	+		PFLU_RS12435	0.38	+1.0
2,760,790	+		PFLU_RS12435	0.38	+0.8
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2,763,260	-		PFLU_RS12435	0.56	+1.5
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2,763,987	+		PFLU_RS12435	0.61	+0.1
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2,765,891	-		PFLU_RS12435	0.75	-1.3
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