Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS10240

Experiment: Glucose (C) and Ammonium chloride (N); with TAPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glucose (C) and Ammonium chloride (N); with TAPS
2,255,895	-		PFLU_RS10235	0.38	-1.6
2,255,895	-		PFLU_RS10235	0.38	+0.4
2,255,895	-		PFLU_RS10235	0.38	-1.6
2,255,895	-		PFLU_RS10235	0.38	+0.5
2,255,895	-		PFLU_RS10235	0.38	-2.6
2,255,895	-		PFLU_RS10235	0.38	-0.8
2,255,895	-		PFLU_RS10235	0.38	-0.3
2,255,895	-		PFLU_RS10235	0.38	+0.3
2,255,899	-		PFLU_RS10235	0.39	-0.6
2,256,032	+		PFLU_RS10235	0.50	+0.1
2,256,032	+		PFLU_RS10235	0.50	-0.3
2,256,032	+		PFLU_RS10235	0.50	+0.4
2,256,032	+		PFLU_RS10235	0.50	-2.1
2,256,032	+		PFLU_RS10235	0.50	-0.8
2,256,033	-		PFLU_RS10235	0.50	-1.2
2,256,033	-		PFLU_RS10235	0.50	+0.7
2,256,036	+		PFLU_RS10235	0.50	-2.3
2,256,036	+		PFLU_RS10235	0.50	-2.5
2,256,036	+		PFLU_RS10235	0.50	+1.4
2,256,036	+		PFLU_RS10235	0.50	+1.4
2,256,037	-		PFLU_RS10235	0.50	-1.4
2,256,037	-		PFLU_RS10235	0.50	-2.4
2,256,047	+		PFLU_RS10235	0.51	+0.5
2,256,047	+		PFLU_RS10235	0.51	+0.2
2,256,048	-		PFLU_RS10235	0.51	+0.3
2,256,048	-		PFLU_RS10235	0.51	-0.8
2,256,440	-		PFLU_RS10235	0.84	-2.0
2,256,643	+				+0.4
2,256,647	+				-0.3
2,256,647	+				+0.2
2,256,647	+				+1.7
2,256,647	+				+0.1
2,256,648	-				-2.3
2,256,648	-				+1.3
2,256,768	-				-0.7
2,256,867	+		PFLU_RS10240	0.12	+0.7
2,256,867	+		PFLU_RS10240	0.12	-1.7
2,256,867	+		PFLU_RS10240	0.12	+1.1
2,256,867	+		PFLU_RS10240	0.12	-0.3
2,256,868	-		PFLU_RS10240	0.12	-0.1
2,256,868	-		PFLU_RS10240	0.12	-0.6
2,256,868	-		PFLU_RS10240	0.12	+1.1
2,256,868	-		PFLU_RS10240	0.12	-0.7
2,256,868	-		PFLU_RS10240	0.12	-0.2
2,256,868	-		PFLU_RS10240	0.12	-0.8
2,257,039	+		PFLU_RS10240	0.21	-1.5
2,257,039	+		PFLU_RS10240	0.21	-0.6
2,257,039	+		PFLU_RS10240	0.21	-2.2
2,257,040	-		PFLU_RS10240	0.21	-1.3
2,257,040	-		PFLU_RS10240	0.21	-0.7
2,257,049	-		PFLU_RS10240	0.21	+0.3
2,257,177	+		PFLU_RS10240	0.28	-0.6
2,257,186	+		PFLU_RS10240	0.28	+0.2
2,257,186	+		PFLU_RS10240	0.28	-0.3
2,257,186	+		PFLU_RS10240	0.28	-0.5
2,257,186	+		PFLU_RS10240	0.28	-0.1
2,257,186	+		PFLU_RS10240	0.28	+1.0
2,257,186	+		PFLU_RS10240	0.28	+0.6
2,257,187	-		PFLU_RS10240	0.28	-0.3
2,257,187	-		PFLU_RS10240	0.28	+0.6
2,257,360	+		PFLU_RS10240	0.37	-2.7
2,257,360	+		PFLU_RS10240	0.37	-0.3
2,257,360	+		PFLU_RS10240	0.37	+1.0
2,257,360	+		PFLU_RS10240	0.37	+0.4
2,257,361	-		PFLU_RS10240	0.37	-2.1
2,257,361	-		PFLU_RS10240	0.37	+1.5
2,257,361	-		PFLU_RS10240	0.37	-1.1
2,257,361	-		PFLU_RS10240	0.37	-2.2
2,257,361	-		PFLU_RS10240	0.37	+1.7
2,257,361	-		PFLU_RS10240	0.37	+0.3
2,257,361	-		PFLU_RS10240	0.37	-1.1
2,257,361	-		PFLU_RS10240	0.37	+0.5
2,257,369	+		PFLU_RS10240	0.37	+0.9
2,257,370	-		PFLU_RS10240	0.37	+2.6
2,257,370	-		PFLU_RS10240	0.37	-0.8
2,257,370	-		PFLU_RS10240	0.37	+0.0
2,257,666	+		PFLU_RS10240	0.52	+1.1
2,257,666	+		PFLU_RS10240	0.52	+0.7
2,257,667	-		PFLU_RS10240	0.52	-0.2
2,257,667	-		PFLU_RS10240	0.52	-1.4
2,257,667	-		PFLU_RS10240	0.52	-1.0
2,257,951	+		PFLU_RS10240	0.66	+0.7
2,257,951	+		PFLU_RS10240	0.66	-1.1
2,257,951	+		PFLU_RS10240	0.66	-1.1
2,257,952	-		PFLU_RS10240	0.67	+0.4
2,257,952	-		PFLU_RS10240	0.67	-1.3
2,257,993	+		PFLU_RS10240	0.69	+1.3
2,257,993	+		PFLU_RS10240	0.69	+0.2
2,257,993	+		PFLU_RS10240	0.69	-1.3
2,257,993	+		PFLU_RS10240	0.69	+0.2
2,257,993	+		PFLU_RS10240	0.69	-0.1
2,257,993	+		PFLU_RS10240	0.69	-2.6
2,257,993	+		PFLU_RS10240	0.69	-1.4
2,257,994	-		PFLU_RS10240	0.69	-2.5
2,257,994	-		PFLU_RS10240	0.69	-0.8
2,257,994	-		PFLU_RS10240	0.69	-1.1
2,257,994	-		PFLU_RS10240	0.69	+0.2
2,258,044	+		PFLU_RS10240	0.71	-0.6
2,258,044	+		PFLU_RS10240	0.71	+0.3
2,258,044	+		PFLU_RS10240	0.71	+1.0
2,258,044	+		PFLU_RS10240	0.71	-0.6
2,258,045	-		PFLU_RS10240	0.71	-2.1
2,258,045	-		PFLU_RS10240	0.71	-0.5
2,258,045	-		PFLU_RS10240	0.71	+0.9
2,258,045	-		PFLU_RS10240	0.71	-0.2
2,258,045	-		PFLU_RS10240	0.71	-2.1
2,258,263	+		PFLU_RS10240	0.82	+1.6
2,258,264	-		PFLU_RS10240	0.82	-2.1
2,258,264	-		PFLU_RS10240	0.82	+0.7
2,258,266	+		PFLU_RS10240	0.82	-0.1
2,258,266	+		PFLU_RS10240	0.82	-0.1
2,258,266	+		PFLU_RS10240	0.82	+0.9
2,258,267	-		PFLU_RS10240	0.82	+0.2
2,258,267	-		PFLU_RS10240	0.82	+0.7
2,258,267	-		PFLU_RS10240	0.82	-1.0
2,258,267	-		PFLU_RS10240	0.82	+1.3
2,258,323	+		PFLU_RS10240	0.85	-2.9
2,258,323	+		PFLU_RS10240	0.85	-1.3
2,258,323	+		PFLU_RS10240	0.85	+0.9
2,258,323	+		PFLU_RS10240	0.85	+1.7
2,258,323	+		PFLU_RS10240	0.85	-1.0
2,258,323	+		PFLU_RS10240	0.85	-0.8
2,258,324	-		PFLU_RS10240	0.85	-0.6
2,258,324	-		PFLU_RS10240	0.85	+0.9
2,258,491	+				+0.6
2,258,491	+				-0.3
2,258,492	-				+1.4
2,258,492	-				-0.4
2,258,635	+				+1.3
2,258,635	+				-0.4
2,258,635	+				+0.2
2,258,635	+				+0.6
2,258,635	+				+1.1
2,258,635	+				+2.5
2,258,636	-				+1.7
2,258,636	-				-0.8
2,258,636	-				+0.5
2,258,636	-				+1.7
2,258,636	-				+2.0
2,258,662	+				+0.1
2,258,662	+				-1.8
2,258,662	+				+1.1
2,258,662	+				-0.3
2,258,662	+				+0.6
2,258,662	+				-2.0
2,258,662	+				-1.1
2,258,662	+				+1.4
2,258,662	+				+0.1
2,258,668	+				-0.6
2,258,668	+				+0.5
2,258,668	+				-1.0
2,258,669	-				-1.4
2,258,713	+		PFLU_RS10245	0.10	+0.1
2,258,713	+		PFLU_RS10245	0.10	+0.2
2,258,713	+		PFLU_RS10245	0.10	+0.0
2,258,713	+		PFLU_RS10245	0.10	-0.1
2,258,713	+		PFLU_RS10245	0.10	+0.2
2,258,713	+		PFLU_RS10245	0.10	-2.1
2,258,713	+		PFLU_RS10245	0.10	+2.3
2,258,713	+		PFLU_RS10245	0.10	-0.3
2,258,713	+		PFLU_RS10245	0.10	-2.0
2,258,713	+		PFLU_RS10245	0.10	+1.7
2,258,713	+		PFLU_RS10245	0.10	+2.2
2,258,713	+		PFLU_RS10245	0.10	+0.4
2,258,713	+		PFLU_RS10245	0.10	+0.6
2,258,713	+		PFLU_RS10245	0.10	+0.9
2,258,714	-		PFLU_RS10245	0.10	+0.5
2,258,714	-		PFLU_RS10245	0.10	-0.6
2,258,714	-		PFLU_RS10245	0.10	-1.3
2,258,714	-		PFLU_RS10245	0.10	+1.0
2,258,714	-		PFLU_RS10245	0.10	-0.3
2,258,714	-		PFLU_RS10245	0.10	+1.1
2,258,714	-		PFLU_RS10245	0.10	+1.3
2,258,714	-		PFLU_RS10245	0.10	-3.0
2,258,714	-		PFLU_RS10245	0.10	+0.1
2,258,714	-		PFLU_RS10245	0.10	-1.6
2,258,714	-		PFLU_RS10245	0.10	+0.7
2,258,714	-		PFLU_RS10245	0.10	+0.6
2,258,714	-		PFLU_RS10245	0.10	-2.5
2,258,714	-		PFLU_RS10245	0.10	+0.2
2,258,714	-		PFLU_RS10245	0.10	-1.3
2,258,714	-		PFLU_RS10245	0.10	-1.2
2,258,714	-		PFLU_RS10245	0.10	-0.6
2,258,714	-		PFLU_RS10245	0.10	-0.1
2,258,714	-		PFLU_RS10245	0.10	-1.3
2,259,052	+		PFLU_RS10245	0.54	+0.4
2,259,166	+		PFLU_RS10245	0.68	+0.3
2,259,166	+		PFLU_RS10245	0.68	+0.1
2,259,181	+		PFLU_RS10245	0.70	-0.5
2,259,181	+		PFLU_RS10245	0.70	-0.5
2,259,182	-		PFLU_RS10245	0.71	+1.2
2,259,182	-		PFLU_RS10245	0.71	-0.8
2,259,182	-		PFLU_RS10245	0.71	-1.1
2,259,182	-		PFLU_RS10245	0.71	-0.0
2,259,182	-		PFLU_RS10245	0.71	+0.2
2,259,359	+				-2.3
2,259,360	-				-0.4
2,259,360	-				-0.2
2,259,360	-				-0.1
2,259,427	+				+0.7
2,259,427	+				+0.2
2,259,427	+				-0.5
2,259,427	+				-0.7
2,259,428	-				-0.8
2,259,428	-				-1.4
2,259,428	-				+0.6
2,259,428	-				-0.3
2,259,428	-				-0.3
2,259,428	-				-2.3
2,259,612	+		PFLU_RS10250	0.19	-1.6
2,259,612	+		PFLU_RS10250	0.19	+0.5
2,259,612	+		PFLU_RS10250	0.19	-0.1
2,259,613	-		PFLU_RS10250	0.19	-0.5
2,259,613	-		PFLU_RS10250	0.19	-3.3