Experiment: LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS24145 and BWI76_RS24150 overlap by 1 nucleotides BWI76_RS24150 and BWI76_RS24155 are separated by 137 nucleotides BWI76_RS24155 and BWI76_RS24160 are separated by 27 nucleotides BWI76_RS24160 and BWI76_RS24165 are separated by 47 nucleotides
BWI76_RS24145: BWI76_RS24145 - hypothetical protein, at 5,034,757 to 5,035,083
_RS24145
BWI76_RS24150: BWI76_RS24150 - tRNA (guanosine(46)-N7)-methyltransferase TrmB, at 5,035,083 to 5,035,802
_RS24150
BWI76_RS24155: BWI76_RS24155 - A/G-specific adenine glycosylase, at 5,035,940 to 5,036,998
_RS24155
BWI76_RS24160: BWI76_RS24160 - Fe(2+)-trafficking protein, at 5,037,026 to 5,037,301
_RS24160
BWI76_RS24165: BWI76_RS24165 - lytic murein transglycosylase, at 5,037,349 to 5,038,434
_RS24165
Position (kb) 5035
5036
5037 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5035.067 kb on - strand at 5035.127 kb on + strand at 5035.256 kb on + strand, within BWI76_RS24150 at 5035.264 kb on - strand, within BWI76_RS24150 at 5035.336 kb on + strand, within BWI76_RS24150 at 5035.479 kb on - strand, within BWI76_RS24150 at 5035.684 kb on - strand, within BWI76_RS24150 at 5035.873 kb on + strand at 5036.181 kb on - strand, within BWI76_RS24155 at 5036.212 kb on + strand, within BWI76_RS24155 at 5036.212 kb on + strand, within BWI76_RS24155 at 5036.291 kb on + strand, within BWI76_RS24155 at 5036.299 kb on - strand, within BWI76_RS24155 at 5036.386 kb on + strand, within BWI76_RS24155 at 5036.394 kb on - strand, within BWI76_RS24155 at 5036.394 kb on - strand, within BWI76_RS24155 at 5036.491 kb on + strand, within BWI76_RS24155 at 5037.006 kb on - strand at 5037.137 kb on + strand, within BWI76_RS24160 at 5037.296 kb on + strand at 5037.435 kb on - strand at 5037.585 kb on + strand, within BWI76_RS24165 at 5037.697 kb on - strand at 5037.698 kb on - strand, within BWI76_RS24165 at 5037.884 kb on + strand, within BWI76_RS24165 at 5037.884 kb on + strand, within BWI76_RS24165 at 5037.892 kb on - strand, within BWI76_RS24165 at 5037.892 kb on - strand, within BWI76_RS24165 at 5037.892 kb on - strand, within BWI76_RS24165 at 5037.892 kb on - strand, within BWI76_RS24165 at 5037.892 kb on - strand, within BWI76_RS24165
Per-strain Table
Position Strand Gene LocusTag Fraction LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL remove 5,035,067 - -0.2 5,035,127 + +0.4 5,035,256 + BWI76_RS24150 0.24 +0.9 5,035,264 - BWI76_RS24150 0.25 +0.4 5,035,336 + BWI76_RS24150 0.35 +0.6 5,035,479 - BWI76_RS24150 0.55 +0.6 5,035,684 - BWI76_RS24150 0.83 +1.4 5,035,873 + -0.4 5,036,181 - BWI76_RS24155 0.23 +0.4 5,036,212 + BWI76_RS24155 0.26 +2.4 5,036,212 + BWI76_RS24155 0.26 +2.0 5,036,291 + BWI76_RS24155 0.33 +0.2 5,036,299 - BWI76_RS24155 0.34 +0.8 5,036,386 + BWI76_RS24155 0.42 +1.5 5,036,394 - BWI76_RS24155 0.43 +0.1 5,036,394 - BWI76_RS24155 0.43 +1.6 5,036,491 + BWI76_RS24155 0.52 +0.9 5,037,006 - -1.5 5,037,137 + BWI76_RS24160 0.40 +1.2 5,037,296 + +1.5 5,037,435 - -2.3 5,037,585 + BWI76_RS24165 0.22 +0.2 5,037,697 - -0.5 5,037,698 - BWI76_RS24165 0.32 +1.0 5,037,884 + BWI76_RS24165 0.49 +0.7 5,037,884 + BWI76_RS24165 0.49 +0.2 5,037,892 - BWI76_RS24165 0.50 -0.8 5,037,892 - BWI76_RS24165 0.50 -0.5 5,037,892 - BWI76_RS24165 0.50 -1.4 5,037,892 - BWI76_RS24165 0.50 -0.4 5,037,892 - BWI76_RS24165 0.50 -0.1
Or see this region's nucleotide sequence