Experiment: LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS24140 and BWI76_RS24145 are separated by 50 nucleotides BWI76_RS24145 and BWI76_RS24150 overlap by 1 nucleotides BWI76_RS24150 and BWI76_RS24155 are separated by 137 nucleotides
BWI76_RS24140: BWI76_RS24140 - hypothetical protein, at 5,033,987 to 5,034,706
_RS24140
BWI76_RS24145: BWI76_RS24145 - hypothetical protein, at 5,034,757 to 5,035,083
_RS24145
BWI76_RS24150: BWI76_RS24150 - tRNA (guanosine(46)-N7)-methyltransferase TrmB, at 5,035,083 to 5,035,802
_RS24150
BWI76_RS24155: BWI76_RS24155 - A/G-specific adenine glycosylase, at 5,035,940 to 5,036,998
_RS24155
Position (kb) 5035
5036 Strain fitness (log2 ratio) -1
0
1
2 at 5034.272 kb on - strand, within BWI76_RS24140 at 5034.306 kb on - strand, within BWI76_RS24140 at 5034.306 kb on - strand, within BWI76_RS24140 at 5034.467 kb on - strand, within BWI76_RS24140 at 5034.515 kb on + strand, within BWI76_RS24140 at 5034.631 kb on + strand, within BWI76_RS24140 at 5034.849 kb on - strand, within BWI76_RS24145 at 5035.067 kb on - strand at 5035.127 kb on + strand at 5035.256 kb on + strand, within BWI76_RS24150 at 5035.264 kb on - strand, within BWI76_RS24150 at 5035.336 kb on + strand, within BWI76_RS24150 at 5035.479 kb on - strand, within BWI76_RS24150 at 5035.684 kb on - strand, within BWI76_RS24150 at 5035.873 kb on + strand at 5036.181 kb on - strand, within BWI76_RS24155 at 5036.212 kb on + strand, within BWI76_RS24155 at 5036.212 kb on + strand, within BWI76_RS24155 at 5036.291 kb on + strand, within BWI76_RS24155 at 5036.299 kb on - strand, within BWI76_RS24155 at 5036.386 kb on + strand, within BWI76_RS24155 at 5036.394 kb on - strand, within BWI76_RS24155 at 5036.394 kb on - strand, within BWI76_RS24155 at 5036.491 kb on + strand, within BWI76_RS24155
Per-strain Table
Position Strand Gene LocusTag Fraction LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL remove 5,034,272 - BWI76_RS24140 0.40 -1.0 5,034,306 - BWI76_RS24140 0.44 +0.1 5,034,306 - BWI76_RS24140 0.44 -0.3 5,034,467 - BWI76_RS24140 0.67 -1.0 5,034,515 + BWI76_RS24140 0.73 +0.0 5,034,631 + BWI76_RS24140 0.89 +0.6 5,034,849 - BWI76_RS24145 0.28 +1.5 5,035,067 - -0.2 5,035,127 + +0.4 5,035,256 + BWI76_RS24150 0.24 +0.9 5,035,264 - BWI76_RS24150 0.25 +0.4 5,035,336 + BWI76_RS24150 0.35 +0.6 5,035,479 - BWI76_RS24150 0.55 +0.6 5,035,684 - BWI76_RS24150 0.83 +1.4 5,035,873 + -0.4 5,036,181 - BWI76_RS24155 0.23 +0.4 5,036,212 + BWI76_RS24155 0.26 +2.4 5,036,212 + BWI76_RS24155 0.26 +2.0 5,036,291 + BWI76_RS24155 0.33 +0.2 5,036,299 - BWI76_RS24155 0.34 +0.8 5,036,386 + BWI76_RS24155 0.42 +1.5 5,036,394 - BWI76_RS24155 0.43 +0.1 5,036,394 - BWI76_RS24155 0.43 +1.6 5,036,491 + BWI76_RS24155 0.52 +0.9
Or see this region's nucleotide sequence