Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS19900
Experiment: LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL |
---|---|---|---|---|---|
remove | |||||
4,161,169 | + | BWI76_RS19895 | 0.38 | +0.2 | |
4,161,170 | - | BWI76_RS19895 | 0.38 | +0.8 | |
4,161,170 | - | BWI76_RS19895 | 0.38 | +0.1 | |
4,162,324 | + | BWI76_RS19900 | 0.40 | +0.6 | |
4,162,446 | + | BWI76_RS19900 | 0.52 | -1.1 | |
4,162,783 | + | BWI76_RS19900 | 0.84 | -3.8 | |
4,162,783 | + | BWI76_RS19900 | 0.84 | +0.3 | |
4,162,791 | - | BWI76_RS19900 | 0.85 | -0.7 | |
4,162,793 | + | BWI76_RS19900 | 0.85 | -1.9 | |
4,162,882 | - | -0.3 | |||
4,162,923 | - | -0.8 | |||
4,162,983 | - | +1.3 | |||
4,162,983 | - | +0.2 | |||
4,163,006 | - | +0.9 | |||
4,163,761 | - | BWI76_RS19905 | 0.63 | -0.5 | |
4,163,897 | + | BWI76_RS19905 | 0.75 | -2.1 | |
4,163,898 | - | BWI76_RS19905 | 0.75 | -1.9 |
Or see this region's nucleotide sequence