Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS19240
Experiment: LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL |
---|---|---|---|---|---|
remove | |||||
4,002,240 | + | BWI76_RS19230 | 0.78 | +1.5 | |
4,002,248 | - | BWI76_RS19230 | 0.79 | -0.2 | |
4,002,408 | - | -0.4 | |||
4,002,436 | - | -0.2 | |||
4,002,533 | + | BWI76_RS19235 | 0.20 | -0.3 | |
4,002,556 | + | BWI76_RS19235 | 0.23 | -0.4 | |
4,002,588 | + | BWI76_RS19235 | 0.28 | +0.2 | |
4,002,643 | + | BWI76_RS19235 | 0.36 | +0.9 | |
4,002,836 | - | BWI76_RS19235 | 0.64 | -0.1 | |
4,003,014 | + | BWI76_RS19235 | 0.89 | +0.5 | |
4,003,060 | + | -1.6 | |||
4,003,221 | + | +0.5 | |||
4,003,403 | - | BWI76_RS19240 | 0.33 | +0.7 | |
4,003,893 | - | +0.5 | |||
4,003,973 | + | -0.0 | |||
4,004,152 | - | BWI76_RS19245 | 0.26 | +0.4 | |
4,004,159 | - | BWI76_RS19245 | 0.27 | -0.1 | |
4,004,271 | - | BWI76_RS19245 | 0.42 | -0.1 | |
4,004,273 | + | BWI76_RS19245 | 0.42 | +0.1 | |
4,004,588 | + | BWI76_RS19245 | 0.83 | -0.4 | |
4,004,662 | - | +1.7 | |||
4,004,741 | + | -0.4 | |||
4,004,805 | - | +0.3 |
Or see this region's nucleotide sequence