Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS18335

Experiment: LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL
3,806,828	-		BWI76_RS18330	0.68	+0.4
3,806,868	-		BWI76_RS18330	0.70	+0.7
3,806,880	+		BWI76_RS18330	0.71	+0.6
3,806,880	+		BWI76_RS18330	0.71	+0.9
3,806,888	-		BWI76_RS18330	0.72	+0.1
3,806,888	-		BWI76_RS18330	0.72	-0.3
3,806,888	-		BWI76_RS18330	0.72	+1.9
3,806,888	-		BWI76_RS18330	0.72	-0.3
3,806,888	-		BWI76_RS18330	0.72	-0.7
3,806,987	-		BWI76_RS18330	0.77	+0.6
3,807,005	+		BWI76_RS18330	0.78	+0.5
3,807,432	+				-1.6
3,807,435	-				-0.9
3,807,440	-				+0.3
3,807,467	+				-1.0
3,807,472	-		BWI76_RS18335	0.10	-1.7
3,807,653	+		BWI76_RS18335	0.38	-0.5
3,807,696	-		BWI76_RS18335	0.44	-2.1
3,807,902	-		BWI76_RS18335	0.76	-0.1
3,807,922	-		BWI76_RS18335	0.79	-2.1
3,807,933	+		BWI76_RS18335	0.80	-1.6
3,807,963	-		BWI76_RS18335	0.85	-0.3
3,807,966	-		BWI76_RS18335	0.85	-0.9
3,807,971	-		BWI76_RS18335	0.86	-1.3
3,807,977	+		BWI76_RS18335	0.87	-0.1
3,807,977	+		BWI76_RS18335	0.87	+0.0
3,807,985	-		BWI76_RS18335	0.88	-1.2
3,807,986	+		BWI76_RS18335	0.88	-1.5
3,808,008	+				-1.9
3,808,016	-				-1.8
3,808,016	-				+1.9
3,808,018	-				-1.5
3,808,035	-				-1.9
3,808,045	+				-1.1
3,808,056	+				-0.1
3,808,056	+				-0.6
3,808,064	-				-0.9
3,808,064	-				-0.7
3,808,084	+				-1.9
3,808,093	+				-1.9
3,808,101	-				-0.1
3,808,200	-				-0.7
3,808,200	-				-0.6
3,808,219	-				+0.3
3,808,220	+				+0.7
3,808,220	+				+0.9
3,808,220	+				+0.6
3,808,225	+				+0.7
3,808,228	-				-0.8
3,808,228	-				-3.0
3,808,228	-				-0.7
3,808,228	-				-0.8
3,808,228	-				-0.7
3,808,228	-				+0.2
3,808,233	-				+0.5
3,808,276	-				-0.2
3,808,276	-				-0.3
3,808,283	-				-1.4
3,808,283	-				-0.9
3,808,283	-				+1.9
3,808,292	+				+0.1
3,808,295	-				-1.2
3,808,300	-				-0.1
3,808,300	-				-1.3
3,808,300	-				+0.3
3,808,302	-				+0.3
3,808,338	-				-0.2
3,808,360	+				-0.9
3,808,361	+				-0.7
3,808,361	+				-0.4
3,808,361	+				-0.5
3,808,361	+				-0.4
3,808,361	+				+0.7
3,808,369	-				-0.3
3,808,369	-				+0.9
3,808,369	-				-0.7
3,808,369	-				+0.2
3,808,369	-				-1.3
3,808,369	-				-0.5
3,808,369	-				-0.2
3,808,369	-				+0.5
3,808,380	+				-0.6
3,808,388	-				+0.6
3,808,407	+				-0.2
3,808,415	-				+2.9
3,808,458	+				+0.0
3,808,458	+				-0.3
3,808,458	+				+0.6
3,808,458	+				+0.1
3,808,458	+				-0.1
3,808,458	+				-0.5
3,808,458	+				-1.0
3,808,458	+				-0.2
3,808,458	+				-0.7
3,808,458	+				+0.0
3,808,458	+				-0.8
3,808,458	+				+1.1
3,808,458	+				-0.3
3,808,458	+				-0.5
3,808,458	+				-0.7
3,808,460	+				-1.4
3,808,463	+				+0.4
3,808,466	-				-0.2
3,808,466	-				+0.9
3,808,466	-				-2.0
3,808,466	-				-0.7
3,808,466	-				+0.5
3,808,466	-				-1.1
3,808,466	-				-0.8
3,808,468	-				-0.4
3,808,471	-				+0.2
3,808,486	-				+0.4
3,808,494	+				-2.7
3,808,514	-				-1.0
3,808,603	+		BWI76_RS18340	0.35	-1.4
3,808,605	-		BWI76_RS18340	0.36	-1.2
3,808,616	+		BWI76_RS18340	0.41	-1.0
3,808,616	+		BWI76_RS18340	0.41	-0.9
3,808,616	+		BWI76_RS18340	0.41	-0.4
3,808,618	+		BWI76_RS18340	0.42	-1.0
3,808,618	+		BWI76_RS18340	0.42	-0.1
3,808,623	+		BWI76_RS18340	0.44	-0.7
3,808,623	+		BWI76_RS18340	0.44	-2.2
3,808,623	+		BWI76_RS18340	0.44	-1.1
3,808,623	+		BWI76_RS18340	0.44	-1.7
3,808,624	-		BWI76_RS18340	0.44	-2.9
3,808,624	-		BWI76_RS18340	0.44	+0.5
3,808,624	-		BWI76_RS18340	0.44	-0.1
3,808,624	-		BWI76_RS18340	0.44	-0.8
3,808,628	+		BWI76_RS18340	0.46	-0.9
3,808,628	+		BWI76_RS18340	0.46	-1.9
3,808,628	+		BWI76_RS18340	0.46	+0.3
3,808,628	+		BWI76_RS18340	0.46	-1.5
3,808,628	+		BWI76_RS18340	0.46	-0.7
3,808,628	+		BWI76_RS18340	0.46	-1.4
3,808,631	-		BWI76_RS18340	0.48	-1.8
3,808,631	-		BWI76_RS18340	0.48	-1.2
3,808,632	+		BWI76_RS18340	0.48	-0.8
3,808,632	+		BWI76_RS18340	0.48	+0.2
3,808,632	+		BWI76_RS18340	0.48	+0.3
3,808,632	+		BWI76_RS18340	0.48	-0.2
3,808,632	+		BWI76_RS18340	0.48	-0.3
3,808,636	-		BWI76_RS18340	0.50	-0.0
3,808,636	-		BWI76_RS18340	0.50	-0.8
3,808,636	-		BWI76_RS18340	0.50	-1.2
3,808,636	-		BWI76_RS18340	0.50	-1.3
3,808,640	-		BWI76_RS18340	0.52	-0.6
3,808,640	-		BWI76_RS18340	0.52	-0.8
3,808,640	-		BWI76_RS18340	0.52	-0.6
3,808,640	-		BWI76_RS18340	0.52	-1.2
3,808,640	-		BWI76_RS18340	0.52	-0.6
3,808,676	+		BWI76_RS18340	0.68	+0.1
3,808,676	+		BWI76_RS18340	0.68	+0.5
3,808,676	+		BWI76_RS18340	0.68	-1.2
3,808,676	+		BWI76_RS18340	0.68	-1.2
3,808,676	+		BWI76_RS18340	0.68	-0.1
3,808,676	+		BWI76_RS18340	0.68	+0.2
3,808,676	+		BWI76_RS18340	0.68	-0.6
3,808,676	+		BWI76_RS18340	0.68	-0.1
3,808,676	+		BWI76_RS18340	0.68	+0.9
3,808,676	+		BWI76_RS18340	0.68	-1.1
3,808,676	+		BWI76_RS18340	0.68	-1.4
3,808,676	+		BWI76_RS18340	0.68	-0.3
3,808,676	+		BWI76_RS18340	0.68	-3.0
3,808,678	+		BWI76_RS18340	0.68	-1.0
3,808,688	+		BWI76_RS18340	0.73	-0.2
3,808,688	+		BWI76_RS18340	0.73	-0.7
3,808,688	+		BWI76_RS18340	0.73	+0.1
3,808,688	+		BWI76_RS18340	0.73	+0.5
3,808,688	+		BWI76_RS18340	0.73	-1.6
3,808,688	+		BWI76_RS18340	0.73	-0.1
3,808,688	+		BWI76_RS18340	0.73	-0.1
3,808,688	+		BWI76_RS18340	0.73	-1.5
3,808,688	+		BWI76_RS18340	0.73	-0.3
3,808,696	-				-0.7
3,808,696	-		BWI76_RS18340	0.76	-2.1
3,808,698	+		BWI76_RS18340	0.77	-0.1
3,808,698	+		BWI76_RS18340	0.77	-0.9
3,808,701	+		BWI76_RS18340	0.79	-0.9
3,808,706	+		BWI76_RS18340	0.81	-0.7
3,808,714	+		BWI76_RS18340	0.84	+0.2
3,808,733	+				-0.6
3,808,772	-				+0.2
3,808,776	+				+0.9
3,808,782	+				-0.1
3,808,782	+				-0.5
3,808,904	-		BWI76_RS18345	0.12	-0.3
3,808,957	+		BWI76_RS18345	0.20	+0.6
3,808,960	-		BWI76_RS18345	0.20	+2.1
3,809,027	-		BWI76_RS18345	0.29	+0.9
3,809,045	+		BWI76_RS18345	0.32	+0.3
3,809,046	+		BWI76_RS18345	0.32	+2.5