Experiment: LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS09075 and BWI76_RS09080 are separated by 152 nucleotides BWI76_RS09080 and BWI76_RS09085 overlap by 1 nucleotides
BWI76_RS09075: BWI76_RS09075 - pyruvate formate lyase-activating protein, at 1,916,043 to 1,916,942
_RS09075
BWI76_RS09080: BWI76_RS09080 - molybdopterin-synthase adenylyltransferase MoeB, at 1,917,095 to 1,917,850
_RS09080
BWI76_RS09085: BWI76_RS09085 - molybdopterin molybdenumtransferase MoeA, at 1,917,850 to 1,919,085
_RS09085
Position (kb) 1917
1918 Strain fitness (log2 ratio) -1
0
1
2 at 1916.103 kb on - strand at 1916.122 kb on + strand at 1916.137 kb on + strand, within BWI76_RS09075 at 1916.137 kb on + strand, within BWI76_RS09075 at 1916.137 kb on + strand, within BWI76_RS09075 at 1916.137 kb on + strand, within BWI76_RS09075 at 1916.137 kb on + strand, within BWI76_RS09075 at 1916.137 kb on + strand, within BWI76_RS09075 at 1916.145 kb on - strand, within BWI76_RS09075 at 1916.145 kb on - strand, within BWI76_RS09075 at 1916.145 kb on - strand, within BWI76_RS09075 at 1916.209 kb on + strand, within BWI76_RS09075 at 1916.218 kb on - strand, within BWI76_RS09075 at 1916.337 kb on - strand, within BWI76_RS09075 at 1916.713 kb on - strand, within BWI76_RS09075 at 1917.117 kb on + strand at 1917.343 kb on - strand, within BWI76_RS09080 at 1917.670 kb on + strand, within BWI76_RS09080 at 1917.818 kb on - strand at 1917.838 kb on + strand at 1917.865 kb on - strand at 1918.082 kb on - strand, within BWI76_RS09085 at 1918.231 kb on + strand, within BWI76_RS09085 at 1918.347 kb on - strand, within BWI76_RS09085 at 1918.418 kb on + strand, within BWI76_RS09085 at 1918.435 kb on + strand, within BWI76_RS09085 at 1918.585 kb on - strand, within BWI76_RS09085 at 1918.846 kb on + strand, within BWI76_RS09085
Per-strain Table
Position Strand Gene LocusTag Fraction LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL remove 1,916,103 - +0.1 1,916,122 + +0.2 1,916,137 + BWI76_RS09075 0.10 +0.1 1,916,137 + BWI76_RS09075 0.10 +0.5 1,916,137 + BWI76_RS09075 0.10 -0.2 1,916,137 + BWI76_RS09075 0.10 +1.0 1,916,137 + BWI76_RS09075 0.10 -0.3 1,916,137 + BWI76_RS09075 0.10 +0.6 1,916,145 - BWI76_RS09075 0.11 -0.1 1,916,145 - BWI76_RS09075 0.11 +1.4 1,916,145 - BWI76_RS09075 0.11 +1.1 1,916,209 + BWI76_RS09075 0.18 -0.3 1,916,218 - BWI76_RS09075 0.19 +0.4 1,916,337 - BWI76_RS09075 0.33 -0.7 1,916,713 - BWI76_RS09075 0.74 +0.8 1,917,117 + +0.2 1,917,343 - BWI76_RS09080 0.33 +0.2 1,917,670 + BWI76_RS09080 0.76 +0.8 1,917,818 - +1.3 1,917,838 + +1.2 1,917,865 - -0.1 1,918,082 - BWI76_RS09085 0.19 +0.6 1,918,231 + BWI76_RS09085 0.31 +0.9 1,918,347 - BWI76_RS09085 0.40 +1.9 1,918,418 + BWI76_RS09085 0.46 +1.7 1,918,435 + BWI76_RS09085 0.47 +1.1 1,918,585 - BWI76_RS09085 0.59 +0.5 1,918,846 + BWI76_RS09085 0.81 +1.2
Or see this region's nucleotide sequence