Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS05415
Experiment: LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL |
---|---|---|---|---|---|
remove | |||||
1,136,583 | - | BWI76_RS05410 | 0.51 | +0.7 | |
1,136,637 | + | BWI76_RS05410 | 0.58 | -0.1 | |
1,136,675 | + | BWI76_RS05410 | 0.63 | +0.1 | |
1,136,785 | + | BWI76_RS05410 | 0.76 | -0.6 | |
1,137,065 | - | +0.1 | |||
1,137,349 | + | BWI76_RS05415 | 0.38 | +0.3 | |
1,137,383 | - | BWI76_RS05415 | 0.42 | -0.1 | |
1,137,448 | + | BWI76_RS05415 | 0.49 | +0.8 | |
1,137,448 | + | -1.0 | |||
1,137,456 | - | BWI76_RS05415 | 0.50 | +0.2 | |
1,137,456 | - | BWI76_RS05415 | 0.50 | +2.4 | |
1,137,471 | - | BWI76_RS05415 | 0.52 | +0.3 | |
1,138,097 | + | -0.2 | |||
1,138,250 | - | BWI76_RS05420 | 0.20 | +0.1 | |
1,138,258 | - | BWI76_RS05420 | 0.21 | -0.2 | |
1,138,364 | + | BWI76_RS05420 | 0.30 | -0.3 | |
1,138,421 | + | BWI76_RS05420 | 0.34 | +0.1 | |
1,138,507 | - | BWI76_RS05420 | 0.42 | -0.7 | |
1,138,532 | + | BWI76_RS05420 | 0.44 | +0.3 | |
1,138,540 | - | BWI76_RS05420 | 0.44 | -1.1 | |
1,138,597 | + | BWI76_RS05420 | 0.49 | +3.0 | |
1,138,631 | + | BWI76_RS05420 | 0.52 | -1.1 | |
1,138,714 | - | BWI76_RS05420 | 0.59 | +1.1 |
Or see this region's nucleotide sequence