Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS01240
Experiment: LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL |
---|---|---|---|---|---|
remove | |||||
253,077 | - | -0.1 | |||
253,154 | + | BWI76_RS01235 | 0.26 | -0.2 | |
253,273 | + | BWI76_RS01235 | 0.51 | +0.9 | |
253,538 | - | +1.2 | |||
253,615 | - | -0.8 | |||
253,657 | + | +0.2 | |||
253,664 | + | +1.2 | |||
253,664 | + | -0.2 | |||
253,672 | - | +1.2 | |||
253,672 | - | +1.3 | |||
253,743 | + | BWI76_RS01240 | 0.10 | -0.3 | |
253,815 | + | BWI76_RS01240 | 0.18 | +1.5 | |
253,823 | - | BWI76_RS01240 | 0.19 | +1.7 | |
253,939 | - | BWI76_RS01240 | 0.33 | +1.4 | |
254,025 | - | BWI76_RS01240 | 0.42 | +2.1 | |
254,123 | + | BWI76_RS01240 | 0.54 | +0.8 | |
254,316 | + | BWI76_RS01240 | 0.76 | +1.1 | |
254,331 | + | BWI76_RS01240 | 0.77 | +0.4 | |
254,339 | - | BWI76_RS01240 | 0.78 | -0.0 | |
254,427 | + | BWI76_RS01240 | 0.88 | +4.5 | |
254,437 | + | BWI76_RS01240 | 0.90 | +0.9 | |
254,639 | + | +1.3 | |||
254,703 | + | +0.6 | |||
254,722 | + | -1.4 | |||
254,722 | + | +1.5 | |||
254,769 | - | +0.3 | |||
254,831 | + | BWI76_RS01245 | 0.13 | +0.4 | |
254,901 | - | BWI76_RS01245 | 0.17 | +0.2 | |
255,222 | - | BWI76_RS01245 | 0.34 | -0.2 |
Or see this region's nucleotide sequence