Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS00745

Experiment: LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS00735 and BWI76_RS00740 are separated by 60 nucleotidesBWI76_RS00740 and BWI76_RS00745 are separated by 92 nucleotidesBWI76_RS00745 and BWI76_RS00750 are separated by 244 nucleotides BWI76_RS00735: BWI76_RS00735 - ATP-dependent 6-phosphofructokinase, at 149,499 to 150,461 _RS00735 BWI76_RS00740: BWI76_RS00740 - ribonuclease E activity regulator RraA, at 150,522 to 151,007 _RS00740 BWI76_RS00745: BWI76_RS00745 - 1,4-dihydroxy-2-naphthoate polyprenyltransferase, at 151,100 to 152,026 _RS00745 BWI76_RS00750: BWI76_RS00750 - ATP-dependent protease ATP-binding subunit HslU, at 152,271 to 153,605 _RS00750 Position (kb) 151 152 153Strain fitness (log2 ratio) -1 0 1 2at 150.559 kb on - strandat 150.683 kb on - strand, within BWI76_RS00740at 150.827 kb on + strand, within BWI76_RS00740at 150.827 kb on - strand, within BWI76_RS00740at 150.867 kb on - strand, within BWI76_RS00740at 150.867 kb on - strand, within BWI76_RS00740at 150.963 kb on - strandat 151.169 kb on - strandat 151.176 kb on - strandat 151.316 kb on - strand, within BWI76_RS00745at 151.316 kb on - strand, within BWI76_RS00745at 151.443 kb on + strand, within BWI76_RS00745at 151.489 kb on + strand, within BWI76_RS00745at 151.489 kb on + strand, within BWI76_RS00745at 151.497 kb on - strand, within BWI76_RS00745at 151.497 kb on - strand, within BWI76_RS00745at 152.095 kb on + strandat 152.172 kb on + strandat 152.206 kb on - strandat 152.239 kb on + strandat 152.239 kb on + strandat 152.243 kb on - strandat 152.247 kb on - strandat 152.481 kb on + strand, within BWI76_RS00750at 152.533 kb on + strand, within BWI76_RS00750at 152.745 kb on - strand, within BWI76_RS00750at 152.784 kb on - strand, within BWI76_RS00750at 152.931 kb on - strand, within BWI76_RS00750

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Per-strain Table

Position Strand Gene LocusTag Fraction LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL
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150,559 - +0.2
150,683 - BWI76_RS00740 0.33 -1.3
150,827 + BWI76_RS00740 0.63 +0.4
150,827 - BWI76_RS00740 0.63 +0.5
150,867 - BWI76_RS00740 0.71 -0.5
150,867 - BWI76_RS00740 0.71 -0.2
150,963 - +0.3
151,169 - +0.1
151,176 - +2.2
151,316 - BWI76_RS00745 0.23 +2.2
151,316 - BWI76_RS00745 0.23 +0.5
151,443 + BWI76_RS00745 0.37 -0.8
151,489 + BWI76_RS00745 0.42 +1.1
151,489 + BWI76_RS00745 0.42 -0.6
151,497 - BWI76_RS00745 0.43 +0.8
151,497 - BWI76_RS00745 0.43 +0.9
152,095 + +0.7
152,172 + +0.0
152,206 - +0.2
152,239 + +0.4
152,239 + -0.6
152,243 - -1.4
152,247 - -0.2
152,481 + BWI76_RS00750 0.16 -1.1
152,533 + BWI76_RS00750 0.20 -0.4
152,745 - BWI76_RS00750 0.36 -0.4
152,784 - BWI76_RS00750 0.38 +0.0
152,931 - BWI76_RS00750 0.49 -0.1

Or see this region's nucleotide sequence