Experiment: Carbon source D-Glucose 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS15005 and ABZR87_RS15010 are separated by 12 nucleotides ABZR87_RS15010 and ABZR87_RS15015 are separated by 49 nucleotides ABZR87_RS15015 and ABZR87_RS15020 are separated by 34 nucleotides
ABZR87_RS15005: ABZR87_RS15005 - TIGR00730 family Rossman fold protein, at 3,163,963 to 3,164,547
_RS15005
ABZR87_RS15010: ABZR87_RS15010 - DUF924 family protein, at 3,164,560 to 3,165,138
_RS15010
ABZR87_RS15015: ABZR87_RS15015 - group II truncated hemoglobin, at 3,165,188 to 3,165,592
_RS15015
ABZR87_RS15020: ABZR87_RS15020 - ABC transporter permease, at 3,165,627 to 3,168,161
_RS15020
Position (kb)
3165
3166 Strain fitness (log2 ratio)
-2
-1
0
1 at 3164.188 kb on - strand, within ABZR87_RS15005 at 3164.188 kb on - strand, within ABZR87_RS15005 at 3164.293 kb on + strand, within ABZR87_RS15005 at 3164.293 kb on + strand, within ABZR87_RS15005 at 3164.293 kb on + strand, within ABZR87_RS15005 at 3164.294 kb on - strand, within ABZR87_RS15005 at 3164.294 kb on - strand, within ABZR87_RS15005 at 3164.377 kb on + strand, within ABZR87_RS15005 at 3164.377 kb on + strand, within ABZR87_RS15005 at 3164.545 kb on + strand at 3164.546 kb on - strand at 3164.688 kb on + strand, within ABZR87_RS15010 at 3164.689 kb on - strand, within ABZR87_RS15010 at 3164.729 kb on + strand, within ABZR87_RS15010 at 3165.155 kb on - strand at 3165.155 kb on - strand at 3165.164 kb on + strand at 3165.165 kb on - strand at 3165.189 kb on + strand at 3165.190 kb on - strand at 3165.340 kb on + strand, within ABZR87_RS15015 at 3165.505 kb on - strand, within ABZR87_RS15015 at 3165.505 kb on - strand, within ABZR87_RS15015 at 3165.505 kb on - strand, within ABZR87_RS15015 at 3165.593 kb on - strand at 3165.696 kb on - strand at 3165.696 kb on - strand at 3165.772 kb on + strand at 3165.772 kb on + strand at 3165.772 kb on + strand at 3165.773 kb on - strand at 3165.773 kb on - strand at 3165.857 kb on - strand at 3165.857 kb on - strand at 3165.857 kb on - strand at 3165.870 kb on + strand at 3165.870 kb on + strand at 3165.952 kb on + strand, within ABZR87_RS15020 at 3165.953 kb on - strand, within ABZR87_RS15020 at 3166.141 kb on + strand, within ABZR87_RS15020 at 3166.142 kb on - strand, within ABZR87_RS15020 at 3166.397 kb on - strand, within ABZR87_RS15020 at 3166.447 kb on + strand, within ABZR87_RS15020 at 3166.447 kb on + strand, within ABZR87_RS15020 at 3166.448 kb on - strand, within ABZR87_RS15020 at 3166.448 kb on - strand, within ABZR87_RS15020 at 3166.507 kb on + strand, within ABZR87_RS15020
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source D-Glucose 10 mM remove 3,164,188 - ABZR87_RS15005 0.38 -0.3 3,164,188 - ABZR87_RS15005 0.38 +0.4 3,164,293 + ABZR87_RS15005 0.56 +0.3 3,164,293 + ABZR87_RS15005 0.56 +1.5 3,164,293 + ABZR87_RS15005 0.56 -0.5 3,164,294 - ABZR87_RS15005 0.57 -0.3 3,164,294 - ABZR87_RS15005 0.57 +0.9 3,164,377 + ABZR87_RS15005 0.71 +0.7 3,164,377 + ABZR87_RS15005 0.71 +0.6 3,164,545 + -0.1 3,164,546 - -0.6 3,164,688 + ABZR87_RS15010 0.22 +0.8 3,164,689 - ABZR87_RS15010 0.22 -0.1 3,164,729 + ABZR87_RS15010 0.29 +0.7 3,165,155 - -0.5 3,165,155 - -0.5 3,165,164 + +0.5 3,165,165 - +0.2 3,165,189 + -0.5 3,165,190 - -0.7 3,165,340 + ABZR87_RS15015 0.38 +0.9 3,165,505 - ABZR87_RS15015 0.78 -0.1 3,165,505 - ABZR87_RS15015 0.78 +0.6 3,165,505 - ABZR87_RS15015 0.78 -0.1 3,165,593 - -0.8 3,165,696 - -0.0 3,165,696 - -0.2 3,165,772 + +0.1 3,165,772 + -0.4 3,165,772 + +0.4 3,165,773 - +0.6 3,165,773 - -0.8 3,165,857 - +0.2 3,165,857 - +0.3 3,165,857 - +0.0 3,165,870 + +0.4 3,165,870 + -0.5 3,165,952 + ABZR87_RS15020 0.13 -0.9 3,165,953 - ABZR87_RS15020 0.13 -2.0 3,166,141 + ABZR87_RS15020 0.20 +0.1 3,166,142 - ABZR87_RS15020 0.20 -0.7 3,166,397 - ABZR87_RS15020 0.30 +0.0 3,166,447 + ABZR87_RS15020 0.32 -0.3 3,166,447 + ABZR87_RS15020 0.32 -0.5 3,166,448 - ABZR87_RS15020 0.32 +0.4 3,166,448 - ABZR87_RS15020 0.32 -0.5 3,166,507 + ABZR87_RS15020 0.35 +0.2
Or see this region's nucleotide sequence