Experiment: Carbon source D-Glucose 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS14995 and ABZR87_RS15000 are separated by 137 nucleotides ABZR87_RS15000 and ABZR87_RS15005 overlap by 4 nucleotides ABZR87_RS15005 and ABZR87_RS15010 are separated by 12 nucleotides ABZR87_RS15010 and ABZR87_RS15015 are separated by 49 nucleotides
ABZR87_RS14995: ABZR87_RS14995 - diacylglycerol kinase, at 3,162,645 to 3,163,109
_RS14995
ABZR87_RS15000: ABZR87_RS15000 - TetR/AcrR family transcriptional regulator, at 3,163,247 to 3,163,966
_RS15000
ABZR87_RS15005: ABZR87_RS15005 - TIGR00730 family Rossman fold protein, at 3,163,963 to 3,164,547
_RS15005
ABZR87_RS15010: ABZR87_RS15010 - DUF924 family protein, at 3,164,560 to 3,165,138
_RS15010
ABZR87_RS15015: ABZR87_RS15015 - group II truncated hemoglobin, at 3,165,188 to 3,165,592
_RS15015
Position (kb)
3163
3164
3165 Strain fitness (log2 ratio)
-2
-1
0
1 at 3163.107 kb on + strand at 3163.108 kb on - strand at 3163.108 kb on - strand at 3163.193 kb on - strand at 3163.195 kb on - strand at 3163.209 kb on + strand at 3163.210 kb on - strand at 3163.210 kb on - strand at 3163.210 kb on - strand at 3163.210 kb on - strand at 3163.210 kb on - strand at 3163.395 kb on - strand, within ABZR87_RS15000 at 3163.517 kb on + strand, within ABZR87_RS15000 at 3163.526 kb on + strand, within ABZR87_RS15000 at 3163.526 kb on + strand, within ABZR87_RS15000 at 3163.526 kb on + strand, within ABZR87_RS15000 at 3163.526 kb on + strand, within ABZR87_RS15000 at 3163.527 kb on - strand, within ABZR87_RS15000 at 3163.527 kb on - strand, within ABZR87_RS15000 at 3163.527 kb on - strand, within ABZR87_RS15000 at 3163.527 kb on - strand, within ABZR87_RS15000 at 3163.527 kb on - strand, within ABZR87_RS15000 at 3163.550 kb on + strand, within ABZR87_RS15000 at 3163.550 kb on + strand, within ABZR87_RS15000 at 3163.550 kb on + strand, within ABZR87_RS15000 at 3163.551 kb on - strand, within ABZR87_RS15000 at 3163.745 kb on + strand, within ABZR87_RS15000 at 3163.746 kb on - strand, within ABZR87_RS15000 at 3163.746 kb on - strand, within ABZR87_RS15000 at 3163.785 kb on - strand, within ABZR87_RS15000 at 3163.785 kb on - strand, within ABZR87_RS15000 at 3163.785 kb on - strand, within ABZR87_RS15000 at 3163.830 kb on - strand, within ABZR87_RS15000 at 3163.830 kb on - strand, within ABZR87_RS15000 at 3163.830 kb on - strand, within ABZR87_RS15000 at 3163.856 kb on + strand, within ABZR87_RS15000 at 3163.857 kb on - strand, within ABZR87_RS15000 at 3163.943 kb on - strand at 3163.981 kb on + strand at 3163.981 kb on + strand at 3163.981 kb on + strand at 3163.982 kb on - strand at 3164.014 kb on + strand at 3164.014 kb on + strand at 3164.015 kb on - strand at 3164.187 kb on + strand, within ABZR87_RS15005 at 3164.188 kb on - strand, within ABZR87_RS15005 at 3164.188 kb on - strand, within ABZR87_RS15005 at 3164.293 kb on + strand, within ABZR87_RS15005 at 3164.293 kb on + strand, within ABZR87_RS15005 at 3164.293 kb on + strand, within ABZR87_RS15005 at 3164.294 kb on - strand, within ABZR87_RS15005 at 3164.294 kb on - strand, within ABZR87_RS15005 at 3164.377 kb on + strand, within ABZR87_RS15005 at 3164.377 kb on + strand, within ABZR87_RS15005 at 3164.545 kb on + strand at 3164.546 kb on - strand at 3164.688 kb on + strand, within ABZR87_RS15010 at 3164.689 kb on - strand, within ABZR87_RS15010 at 3164.729 kb on + strand, within ABZR87_RS15010 at 3165.155 kb on - strand at 3165.155 kb on - strand at 3165.164 kb on + strand at 3165.165 kb on - strand at 3165.189 kb on + strand at 3165.190 kb on - strand at 3165.340 kb on + strand, within ABZR87_RS15015 at 3165.505 kb on - strand, within ABZR87_RS15015 at 3165.505 kb on - strand, within ABZR87_RS15015 at 3165.505 kb on - strand, within ABZR87_RS15015
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source D-Glucose 10 mM remove 3,163,107 + -2.2 3,163,108 - -0.1 3,163,108 - -1.3 3,163,193 - -1.1 3,163,195 - +1.0 3,163,209 + +0.0 3,163,210 - +0.1 3,163,210 - +0.6 3,163,210 - -0.2 3,163,210 - +0.5 3,163,210 - -0.2 3,163,395 - ABZR87_RS15000 0.21 +0.7 3,163,517 + ABZR87_RS15000 0.38 +0.0 3,163,526 + ABZR87_RS15000 0.39 -0.3 3,163,526 + ABZR87_RS15000 0.39 -0.5 3,163,526 + ABZR87_RS15000 0.39 +0.0 3,163,526 + ABZR87_RS15000 0.39 -0.1 3,163,527 - ABZR87_RS15000 0.39 +0.2 3,163,527 - ABZR87_RS15000 0.39 +0.1 3,163,527 - ABZR87_RS15000 0.39 +0.5 3,163,527 - ABZR87_RS15000 0.39 +0.3 3,163,527 - ABZR87_RS15000 0.39 +0.2 3,163,550 + ABZR87_RS15000 0.42 +1.0 3,163,550 + ABZR87_RS15000 0.42 +0.2 3,163,550 + ABZR87_RS15000 0.42 +1.6 3,163,551 - ABZR87_RS15000 0.42 +0.1 3,163,745 + ABZR87_RS15000 0.69 -0.1 3,163,746 - ABZR87_RS15000 0.69 +0.2 3,163,746 - ABZR87_RS15000 0.69 -0.2 3,163,785 - ABZR87_RS15000 0.75 +0.2 3,163,785 - ABZR87_RS15000 0.75 +0.1 3,163,785 - ABZR87_RS15000 0.75 +0.1 3,163,830 - ABZR87_RS15000 0.81 +0.2 3,163,830 - ABZR87_RS15000 0.81 -0.3 3,163,830 - ABZR87_RS15000 0.81 +0.4 3,163,856 + ABZR87_RS15000 0.85 -0.3 3,163,857 - ABZR87_RS15000 0.85 +0.6 3,163,943 - +0.3 3,163,981 + +0.5 3,163,981 + +1.4 3,163,981 + -0.2 3,163,982 - +0.5 3,164,014 + +1.0 3,164,014 + +0.2 3,164,015 - -0.3 3,164,187 + ABZR87_RS15005 0.38 +0.9 3,164,188 - ABZR87_RS15005 0.38 -0.3 3,164,188 - ABZR87_RS15005 0.38 +0.4 3,164,293 + ABZR87_RS15005 0.56 +0.3 3,164,293 + ABZR87_RS15005 0.56 +1.5 3,164,293 + ABZR87_RS15005 0.56 -0.5 3,164,294 - ABZR87_RS15005 0.57 -0.3 3,164,294 - ABZR87_RS15005 0.57 +0.9 3,164,377 + ABZR87_RS15005 0.71 +0.7 3,164,377 + ABZR87_RS15005 0.71 +0.6 3,164,545 + -0.1 3,164,546 - -0.6 3,164,688 + ABZR87_RS15010 0.22 +0.8 3,164,689 - ABZR87_RS15010 0.22 -0.1 3,164,729 + ABZR87_RS15010 0.29 +0.7 3,165,155 - -0.5 3,165,155 - -0.5 3,165,164 + +0.5 3,165,165 - +0.2 3,165,189 + -0.5 3,165,190 - -0.7 3,165,340 + ABZR87_RS15015 0.38 +0.9 3,165,505 - ABZR87_RS15015 0.78 -0.1 3,165,505 - ABZR87_RS15015 0.78 +0.6 3,165,505 - ABZR87_RS15015 0.78 -0.1
Or see this region's nucleotide sequence