Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS22870
Experiment: LB 0.5x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 0.5x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL |
---|---|---|---|---|---|
remove | |||||
4,769,880 | - | +0.8 | |||
4,769,948 | - | -0.9 | |||
4,770,001 | - | -0.4 | |||
4,770,003 | + | BWI76_RS22865 | 0.10 | +0.3 | |
4,770,011 | - | BWI76_RS22865 | 0.11 | +1.3 | |
4,770,061 | - | BWI76_RS22865 | 0.17 | -1.4 | |
4,770,091 | + | BWI76_RS22865 | 0.21 | +0.1 | |
4,770,099 | + | BWI76_RS22865 | 0.22 | -0.7 | |
4,770,399 | + | BWI76_RS22865 | 0.57 | +0.6 | |
4,770,415 | - | BWI76_RS22865 | 0.59 | +0.5 | |
4,770,442 | + | BWI76_RS22865 | 0.62 | -0.5 | |
4,770,830 | + | +0.3 | |||
4,770,892 | - | -0.9 | |||
4,771,221 | - | BWI76_RS22870 | 0.25 | +2.1 | |
4,771,287 | + | BWI76_RS22870 | 0.30 | +1.3 | |
4,771,295 | + | BWI76_RS22870 | 0.31 | +0.2 | |
4,771,635 | - | BWI76_RS22870 | 0.56 | +1.5 | |
4,771,784 | + | BWI76_RS22870 | 0.67 | +1.1 | |
4,771,916 | - | BWI76_RS22870 | 0.76 | +1.9 | |
4,771,989 | + | BWI76_RS22870 | 0.82 | +1.6 | |
4,772,059 | - | BWI76_RS22870 | 0.87 | +1.1 | |
4,772,103 | - | BWI76_RS22870 | 0.90 | +0.9 | |
4,772,186 | + | +1.5 | |||
4,772,217 | - | +1.1 | |||
4,772,286 | - | -0.3 | |||
4,772,527 | - | -0.9 | |||
4,772,785 | - | +1.1 | |||
4,772,889 | + | -0.4 | |||
4,772,971 | + | BWI76_RS22875 | 0.15 | +0.3 | |
4,773,154 | + | BWI76_RS22875 | 0.29 | +0.5 |
Or see this region's nucleotide sequence