Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS09560
Experiment: LB 0.5x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 0.5x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL |
---|---|---|---|---|---|
remove | |||||
1,999,411 | - | BWI76_RS09555 | 0.57 | -0.4 | |
1,999,717 | + | BWI76_RS09555 | 0.75 | +0.8 | |
2,000,108 | - | -0.9 | |||
2,000,178 | + | +1.8 | |||
2,000,441 | - | BWI76_RS09560 | 0.34 | +0.7 | |
2,000,602 | - | BWI76_RS09560 | 0.71 | -2.5 | |
2,000,916 | - | BWI76_RS09565 | 0.15 | +0.6 | |
2,000,965 | + | BWI76_RS09565 | 0.20 | +0.3 | |
2,001,280 | + | BWI76_RS09565 | 0.53 | +1.1 | |
2,001,288 | - | BWI76_RS09565 | 0.54 | +0.4 | |
2,001,446 | - | BWI76_RS09565 | 0.70 | +1.2 | |
2,001,562 | + | BWI76_RS09565 | 0.82 | +1.7 |
Or see this region's nucleotide sequence